BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019940
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623530.1| Pentatricopeptide repeat-containing protein ...   216   2e-54
ref|XP_003533674.1| PREDICTED: pentatricopeptide repeat-containi...   199   2e-49
ref|XP_002309173.1| predicted protein [Populus trichocarpa] gi|2...   174   7e-42
ref|XP_002533822.1| pentatricopeptide repeat-containing protein,...   173   2e-41
ref|NP_181376.3| pentatricopeptide repeat-containing protein [Ar...   162   3e-38

>ref|XP_003623530.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498545|gb|AES79748.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 653

 Score =  216 bits (550), Expect = 2e-54
 Identities = 105/123 (85%), Positives = 115/123 (93%)
 Frame = +1

Query: 1   VDALDILNQLKEDGIKPDIVCYTIVLSGIVAEGDYEKLDELFDEMLVLGLIPDVYTYNVY 180
           +DAL+ILNQLKEDGIKPDIVCYTIVLSGIV EGDY KLDELFDE+LVLGL+PDVYTYNVY
Sbjct: 272 MDALEILNQLKEDGIKPDIVCYTIVLSGIVKEGDYVKLDELFDEILVLGLVPDVYTYNVY 331

Query: 181 INGLCKQNNVDEALKVVVSMDKLGCKPNVVTYNTLLGALCVAGDLSKARGLMKEMGLKGV 360
           INGLCKQNN DEALK+VVSM+KLGCKPNVVTYNTLLGALC++GDL KA+ +MKEM LKGV
Sbjct: 332 INGLCKQNNFDEALKIVVSMEKLGCKPNVVTYNTLLGALCMSGDLGKAKRVMKEMRLKGV 391

Query: 361 GPN 369
             N
Sbjct: 392 ELN 394



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/121 (26%), Positives = 64/121 (52%)
 Frame = +1

Query: 4   DALDILNQLKEDGIKPDIVCYTIVLSGIVAEGDYEKLDELFDEMLVLGLIPDVYTYNVYI 183
           +AL I+  +++ G KP++V Y  +L  +   GD  K   +  EM + G+  +++TY + +
Sbjct: 343 EALKIVVSMEKLGCKPNVVTYNTLLGALCMSGDLGKAKRVMKEMRLKGVELNLHTYRIML 402

Query: 184 NGLCKQNNVDEALKVVVSMDKLGCKPNVVTYNTLLGALCVAGDLSKARGLMKEMGLKGVG 363
           +GL  +  + EA  ++  M +    P   T+++++  +C  G +S A  LM ++  K   
Sbjct: 403 DGLVGKGEIGEACVLLEEMLEKCFYPRSSTFDSIVHQMCQKGLISDALVLMNKIVAKSFD 462

Query: 364 P 366
           P
Sbjct: 463 P 463


>ref|XP_003533674.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Glycine max]
          Length = 499

 Score =  199 bits (506), Expect = 2e-49
 Identities = 99/123 (80%), Positives = 109/123 (88%)
 Frame = +1

Query: 1   VDALDILNQLKEDGIKPDIVCYTIVLSGIVAEGDYEKLDELFDEMLVLGLIPDVYTYNVY 180
           +DALDILNQ K+DGIK D+V YT+VLSGIVAEG+Y  LDELFDEMLV+GLIPD YTYNVY
Sbjct: 278 MDALDILNQQKQDGIKLDVVSYTMVLSGIVAEGEYVMLDELFDEMLVIGLIPDAYTYNVY 337

Query: 181 INGLCKQNNVDEALKVVVSMDKLGCKPNVVTYNTLLGALCVAGDLSKARGLMKEMGLKGV 360
           INGLCKQNNV EAL++V SM++LGCKPNVVTYNTLLGAL VAGD  KAR LMKEMG KGV
Sbjct: 338 INGLCKQNNVAEALQIVASMEELGCKPNVVTYNTLLGALSVAGDFVKARELMKEMGWKGV 397

Query: 361 GPN 369
           G N
Sbjct: 398 GLN 400



 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 32/121 (26%), Positives = 63/121 (52%)
 Frame = +1

Query: 4   DALDILNQLKEDGIKPDIVCYTIVLSGIVAEGDYEKLDELFDEMLVLGLIPDVYTYNVYI 183
           +AL I+  ++E G KP++V Y  +L  +   GD+ K  EL  EM   G+  +++TY + +
Sbjct: 349 EALQIVASMEELGCKPNVVTYNTLLGALSVAGDFVKARELMKEMGWKGVGLNLHTYRIVL 408

Query: 184 NGLCKQNNVDEALKVVVSMDKLGCKPNVVTYNTLLGALCVAGDLSKARGLMKEMGLKGVG 363
           +GL  +  + E+  ++  M +    P   T++ ++  +C     ++A  L K++  K   
Sbjct: 409 DGLVGKGEIGESCLLLEEMLEKCLFPRSSTFDNIIFQMCQKDLFTEAMELTKKVVAKSFL 468

Query: 364 P 366
           P
Sbjct: 469 P 469


>ref|XP_002309173.1| predicted protein [Populus trichocarpa] gi|222855149|gb|EEE92696.1|
           predicted protein [Populus trichocarpa]
          Length = 506

 Score =  174 bits (441), Expect = 7e-42
 Identities = 79/123 (64%), Positives = 99/123 (80%)
 Frame = +1

Query: 1   VDALDILNQLKEDGIKPDIVCYTIVLSGIVAEGDYEKLDELFDEMLVLGLIPDVYTYNVY 180
           +DAL +LN +K D IKPDI CYT+VL G++ + DY K DELFDE+LV GL+PD YTYNVY
Sbjct: 273 LDALHVLNHMKSDRIKPDIFCYTMVLHGVIEDKDYLKADELFDELLVFGLVPDAYTYNVY 332

Query: 181 INGLCKQNNVDEALKVVVSMDKLGCKPNVVTYNTLLGALCVAGDLSKARGLMKEMGLKGV 360
           INGLCKQNNV   +K+V SM++LGCKPN++TYN L+  LC  G+LSKA  L++EMGLKG+
Sbjct: 333 INGLCKQNNVQAGIKMVASMEELGCKPNLITYNMLVKQLCKVGELSKAGELVREMGLKGI 392

Query: 361 GPN 369
           G N
Sbjct: 393 GLN 395


>ref|XP_002533822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526239|gb|EEF28557.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 373

 Score =  173 bits (438), Expect = 2e-41
 Identities = 78/121 (64%), Positives = 102/121 (84%)
 Frame = +1

Query: 1   VDALDILNQLKEDGIKPDIVCYTIVLSGIVAEGDYEKLDELFDEMLVLGLIPDVYTYNVY 180
           ++AL++LNQ+K DGIKPDIVCYT VL+G++A G Y K DELFDE+LV GL+PDVYTYNVY
Sbjct: 145 MEALNVLNQMKLDGIKPDIVCYTTVLNGVIANGVYSKADELFDELLVFGLVPDVYTYNVY 204

Query: 181 INGLCKQNNVDEALKVVVSMDKLGCKPNVVTYNTLLGALCVAGDLSKARGLMKEMGLKGV 360
           I GLCKQNNV+  +++V SM++LGCKPN++TYN LL  LC  G+ S+AR L+++MG KG+
Sbjct: 205 IYGLCKQNNVEAGIEMVTSMEELGCKPNLITYNILLEDLCKNGEDSRARDLVRDMGSKGI 264

Query: 361 G 363
           G
Sbjct: 265 G 265


>ref|NP_181376.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546769|sp|Q8L6Y7.2|PP193_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g38420, mitochondrial; Flags: Precursor
           gi|3395430|gb|AAC28762.1| hypothetical protein
           [Arabidopsis thaliana] gi|330254441|gb|AEC09535.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 453

 Score =  162 bits (410), Expect = 3e-38
 Identities = 76/122 (62%), Positives = 99/122 (81%)
 Frame = +1

Query: 4   DALDILNQLKEDGIKPDIVCYTIVLSGIVAEGDYEKLDELFDEMLVLGLIPDVYTYNVYI 183
           + + +LNQ+K D ++PD+VCYTIVL G++A+ DY K D+LFDE+L+LGL PDVYTYNVYI
Sbjct: 269 EVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYI 328

Query: 184 NGLCKQNNVDEALKVVVSMDKLGCKPNVVTYNTLLGALCVAGDLSKARGLMKEMGLKGVG 363
           NGLCKQN+++ ALK++ SM+KLG +PNVVTYN L+ AL  AGDLS+A+ L KEM   GV 
Sbjct: 329 NGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVN 388

Query: 364 PN 369
            N
Sbjct: 389 RN 390



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/122 (26%), Positives = 58/122 (47%)
 Frame = +1

Query: 4   DALDILNQLKEDGIKPDIVCYTIVLSGIVAEGDYEKLDELFDEMLVLGLIPDVYTYNVYI 183
           D +  L  L++    P +  YT+V+  +V  G  +++  + ++M    + PD+  Y + +
Sbjct: 234 DVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVL 293

Query: 184 NGLCKQNNVDEALKVVVSMDKLGCKPNVVTYNTLLGALCVAGDLSKARGLMKEMGLKGVG 363
            G+    +  +A K+   +  LG  P+V TYN  +  LC   D+  A  +M  M   G  
Sbjct: 294 QGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSE 353

Query: 364 PN 369
           PN
Sbjct: 354 PN 355