BLASTX nr result

ID: Glycyrrhiza24_contig00019938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019938
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534406.1| PREDICTED: structural maintenance of chromos...   184   9e-45
ref|XP_003606501.1| Structural maintenance of chromosomes protei...   179   3e-43
emb|CBI38567.3| unnamed protein product [Vitis vinifera]              131   7e-29
ref|XP_002278113.1| PREDICTED: structural maintenance of chromos...   131   7e-29
ref|XP_004166709.1| PREDICTED: LOW QUALITY PROTEIN: structural m...   128   4e-28

>ref|XP_003534406.1| PREDICTED: structural maintenance of chromosomes protein 6-like
           [Glycine max]
          Length = 1057

 Score =  184 bits (466), Expect = 9e-45
 Identities = 90/140 (64%), Positives = 114/140 (81%)
 Frame = +2

Query: 2   LKETLSQSMSLAKKEAFALERDCTCKINNIQKMVQQLKMLEQQMQDIHEQHVKNTQAEES 181
           +KE L+QS+S+AKKEAF LERDC CK +NIQKMV QL+ L++Q+QDIH+QHVKN+QAEES
Sbjct: 315 MKENLNQSVSMAKKEAFELERDCKCKTSNIQKMVNQLEKLKKQVQDIHDQHVKNSQAEES 374

Query: 182 EMEEKLKGLQDEVHAADLELKSLKEEQDTLRNSMNRQNDEMRKIDDKIQDHVKNYQHITR 361
            MEEKLKGL+DEVHAA+ +LK L+EE+  L ++++RQ DE+RKI DKI DH K+Y+ +  
Sbjct: 375 NMEEKLKGLKDEVHAAESKLKRLQEEEALLLDNIHRQKDEIRKIADKIDDHEKSYKDLMC 434

Query: 362 SIHSLQQQQSNKIEAFGGGK 421
            I  LQQ QSNKI  FGG K
Sbjct: 435 QIRGLQQNQSNKITVFGGNK 454


>ref|XP_003606501.1| Structural maintenance of chromosomes protein [Medicago truncatula]
           gi|355507556|gb|AES88698.1| Structural maintenance of
           chromosomes protein [Medicago truncatula]
          Length = 622

 Score =  179 bits (453), Expect = 3e-43
 Identities = 88/140 (62%), Positives = 110/140 (78%)
 Frame = +2

Query: 2   LKETLSQSMSLAKKEAFALERDCTCKINNIQKMVQQLKMLEQQMQDIHEQHVKNTQAEES 181
           +KE+LS S+S AKKEAF L+RDC CK +N+QKMVQQ+K LE QMQ IHEQHVKNTQAEES
Sbjct: 317 MKESLSHSLSSAKKEAFELQRDCKCKASNVQKMVQQVKKLELQMQGIHEQHVKNTQAEES 376

Query: 182 EMEEKLKGLQDEVHAADLELKSLKEEQDTLRNSMNRQNDEMRKIDDKIQDHVKNYQHITR 361
           +MEEKLKGL++EV AA+ ELK LK+E+D L  ++++Q +E+  I  KIQDH   Y  I  
Sbjct: 377 DMEEKLKGLREEVDAAEFELKRLKKEEDILMTNIDKQKEEISSIAAKIQDHESKYNGIMH 436

Query: 362 SIHSLQQQQSNKIEAFGGGK 421
           ++  LQ+QQSNKI AFGG K
Sbjct: 437 NVRDLQRQQSNKITAFGGNK 456


>emb|CBI38567.3| unnamed protein product [Vitis vinifera]
          Length = 1027

 Score =  131 bits (329), Expect = 7e-29
 Identities = 68/140 (48%), Positives = 95/140 (67%)
 Frame = +2

Query: 2   LKETLSQSMSLAKKEAFALERDCTCKINNIQKMVQQLKMLEQQMQDIHEQHVKNTQAEES 181
           +KE L Q +SLA KE   LE +   K N IQKMV  ++ L+QQ+ ++HEQ +KNTQAEES
Sbjct: 287 MKEDLQQRLSLATKERLELEEEHCRKTNKIQKMVNLVRRLDQQVHEVHEQDLKNTQAEES 346

Query: 182 EMEEKLKGLQDEVHAADLELKSLKEEQDTLRNSMNRQNDEMRKIDDKIQDHVKNYQHITR 361
           E++E LKGLQDE+   +L L  LKEE+  L  S++ + DE+RKI D+I D+ + ++    
Sbjct: 347 EIKEMLKGLQDELDTTNLILSRLKEEESALSASLSIKMDEIRKISDEIDDYERKHRENYS 406

Query: 362 SIHSLQQQQSNKIEAFGGGK 421
            I  LQQ Q+NK+ AFGG +
Sbjct: 407 YICELQQHQTNKVTAFGGDR 426


>ref|XP_002278113.1| PREDICTED: structural maintenance of chromosomes protein 6-like
           [Vitis vinifera]
          Length = 1057

 Score =  131 bits (329), Expect = 7e-29
 Identities = 68/140 (48%), Positives = 95/140 (67%)
 Frame = +2

Query: 2   LKETLSQSMSLAKKEAFALERDCTCKINNIQKMVQQLKMLEQQMQDIHEQHVKNTQAEES 181
           +KE L Q +SLA KE   LE +   K N IQKMV  ++ L+QQ+ ++HEQ +KNTQAEES
Sbjct: 317 MKEDLQQRLSLATKERLELEEEHCRKTNKIQKMVNLVRRLDQQVHEVHEQDLKNTQAEES 376

Query: 182 EMEEKLKGLQDEVHAADLELKSLKEEQDTLRNSMNRQNDEMRKIDDKIQDHVKNYQHITR 361
           E++E LKGLQDE+   +L L  LKEE+  L  S++ + DE+RKI D+I D+ + ++    
Sbjct: 377 EIKEMLKGLQDELDTTNLILSRLKEEESALSASLSIKMDEIRKISDEIDDYERKHRENYS 436

Query: 362 SIHSLQQQQSNKIEAFGGGK 421
            I  LQQ Q+NK+ AFGG +
Sbjct: 437 YICELQQHQTNKVTAFGGDR 456


>ref|XP_004166709.1| PREDICTED: LOW QUALITY PROTEIN: structural maintenance of
           chromosomes protein 6-like, partial [Cucumis sativus]
          Length = 969

 Score =  128 bits (322), Expect = 4e-28
 Identities = 64/140 (45%), Positives = 96/140 (68%)
 Frame = +2

Query: 2   LKETLSQSMSLAKKEAFALERDCTCKINNIQKMVQQLKMLEQQMQDIHEQHVKNTQAEES 181
           +K+ L ++++ A +E   LE +   KIN IQK+ +++++LEQQ+QDIHEQH+KNTQAEES
Sbjct: 311 MKDELQETLTSATREKLGLEEEHGRKINYIQKLAKRVRLLEQQVQDIHEQHIKNTQAEES 370

Query: 182 EMEEKLKGLQDEVHAADLELKSLKEEQDTLRNSMNRQNDEMRKIDDKIQDHVKNYQHITR 361
           E+EEKLK L+ E  AA   +  LKEE++ L  S+    +E++KI ++I  + K     + 
Sbjct: 371 EIEEKLKELESETEAAKSTVMRLKEEENALMESLYSGRNEIKKIAEEIASYEKKGYEFSH 430

Query: 362 SIHSLQQQQSNKIEAFGGGK 421
           SI  L+Q Q+NK+ AFGG K
Sbjct: 431 SIQELKQHQTNKVTAFGGDK 450


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