BLASTX nr result

ID: Glycyrrhiza24_contig00019930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019930
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531419.1| PREDICTED: DNA-directed RNA polymerases I, I...    60   1e-07
ref|XP_003546864.1| PREDICTED: DNA-directed RNA polymerases I, I...    59   5e-07
gb|AFK47081.1| unknown [Lotus japonicus]                               58   9e-07

>ref|XP_003531419.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
          rpabc3-like [Glycine max]
          Length = 160

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = -3

Query: 91 MSELLFDDIFKVENIDPDGKKYDKVSRIVA 2
          MSELLFDDIFKVE +DPDGKKYDKVSRIVA
Sbjct: 1  MSELLFDDIFKVEKVDPDGKKYDKVSRIVA 30


>ref|XP_003546864.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
          rpabc3-like [Glycine max]
          Length = 145

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 27/30 (90%), Positives = 29/30 (96%)
 Frame = -3

Query: 91 MSELLFDDIFKVENIDPDGKKYDKVSRIVA 2
          MSELLF+DIFKVE +DPDGKKYDKVSRIVA
Sbjct: 1  MSELLFNDIFKVEKVDPDGKKYDKVSRIVA 30


>gb|AFK47081.1| unknown [Lotus japonicus]
          Length = 138

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = -3

Query: 91 MSELLFDDIFKVENIDPDGKKYDKVSRIVA 2
          MSE+ FDDIFKVEN+DPDGKKYDKVSRI A
Sbjct: 1  MSEIFFDDIFKVENLDPDGKKYDKVSRIEA 30


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