BLASTX nr result

ID: Glycyrrhiza24_contig00019919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019919
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601844.1| Chloroplast small heat shock protein [Medica...   133   3e-49
ref|XP_003538574.1| PREDICTED: small heat shock protein, chlorop...   127   9e-49
gb|ACU20181.1| unknown [Glycine max]                                  124   5e-48
ref|XP_003552791.1| PREDICTED: small heat shock protein, chlorop...   127   8e-48
gb|ADQ08650.1| chloroplast small heat shock protein 1 [Potentill...   100   5e-40

>ref|XP_003601844.1| Chloroplast small heat shock protein [Medicago truncatula]
           gi|355490892|gb|AES72095.1| Chloroplast small heat shock
           protein [Medicago truncatula]
          Length = 221

 Score =  133 bits (335), Expect(2) = 3e-49
 Identities = 61/71 (85%), Positives = 64/71 (90%)
 Frame = -2

Query: 589 MEWPSSPLPSEGVGGYRRRGRTPWEIKEGEGEYKMRFDMPGMNKEDVKVWVEEKMLVVKA 410
           +EWPSSPLP EGVGGYRRRGRTPWEIKEGE EYKMRFDMPGMNKEDVKVWVEEKMLVVKA
Sbjct: 98  IEWPSSPLPIEGVGGYRRRGRTPWEIKEGESEYKMRFDMPGMNKEDVKVWVEEKMLVVKA 157

Query: 409 EKKAHMNDDDD 377
           EK     +D+D
Sbjct: 158 EKAPKKKNDED 168



 Score = 87.4 bits (215), Expect(2) = 3e-49
 Identities = 47/59 (79%), Positives = 51/59 (86%)
 Frame = -1

Query: 275 DDDGEVWSAKSYGRYSSRIALPENVQLENIKAEVKDGVLYITIPKATSCSSNILDIHVQ 99
           +D+ E WS KSYGRYSSRIALPENVQ ENIKAEVKDGVLYITIPKAT+  S +LDI VQ
Sbjct: 165 NDEDEEWS-KSYGRYSSRIALPENVQFENIKAEVKDGVLYITIPKATT-YSKVLDISVQ 221


>ref|XP_003538574.1| PREDICTED: small heat shock protein, chloroplastic-like [Glycine
           max]
          Length = 235

 Score =  127 bits (318), Expect(2) = 9e-49
 Identities = 58/71 (81%), Positives = 62/71 (87%)
 Frame = -2

Query: 589 MEWPSSPLPSEGVGGYRRRGRTPWEIKEGEGEYKMRFDMPGMNKEDVKVWVEEKMLVVKA 410
           +EWPSSPLPSEGVGGYRRRGR PWEIKE E EYKMRFDMPGMNKEDVKVWVEEKMLVVKA
Sbjct: 99  LEWPSSPLPSEGVGGYRRRGRAPWEIKECESEYKMRFDMPGMNKEDVKVWVEEKMLVVKA 158

Query: 409 EKKAHMNDDDD 377
           EK      +++
Sbjct: 159 EKAQKKKQENE 169



 Score = 92.4 bits (228), Expect(2) = 9e-49
 Identities = 48/55 (87%), Positives = 50/55 (90%)
 Frame = -1

Query: 263 EVWSAKSYGRYSSRIALPENVQLENIKAEVKDGVLYITIPKATSCSSNILDIHVQ 99
           E WSAKSYGRYSSRIALP+NVQ ENIKAEVKDG+LYITIPKATS  SNILDI VQ
Sbjct: 182 EEWSAKSYGRYSSRIALPDNVQFENIKAEVKDGMLYITIPKATS-YSNILDIQVQ 235


>gb|ACU20181.1| unknown [Glycine max]
          Length = 235

 Score =  124 bits (312), Expect(2) = 5e-48
 Identities = 57/71 (80%), Positives = 61/71 (85%)
 Frame = -2

Query: 589 MEWPSSPLPSEGVGGYRRRGRTPWEIKEGEGEYKMRFDMPGMNKEDVKVWVEEKMLVVKA 410
           +EWPSSPLPSEGVGGYRRRGR PWEIKE E EYKMRFD PGMNKEDVKVWVEEKMLVVKA
Sbjct: 99  LEWPSSPLPSEGVGGYRRRGRAPWEIKECESEYKMRFDTPGMNKEDVKVWVEEKMLVVKA 158

Query: 409 EKKAHMNDDDD 377
           EK      +++
Sbjct: 159 EKAQKKKQENE 169



 Score = 92.4 bits (228), Expect(2) = 5e-48
 Identities = 48/55 (87%), Positives = 50/55 (90%)
 Frame = -1

Query: 263 EVWSAKSYGRYSSRIALPENVQLENIKAEVKDGVLYITIPKATSCSSNILDIHVQ 99
           E WSAKSYGRYSSRIALP+NVQ ENIKAEVKDG+LYITIPKATS  SNILDI VQ
Sbjct: 182 EEWSAKSYGRYSSRIALPDNVQFENIKAEVKDGMLYITIPKATS-YSNILDIQVQ 235


>ref|XP_003552791.1| PREDICTED: small heat shock protein, chloroplastic-like [Glycine
           max]
          Length = 171

 Score =  127 bits (320), Expect(2) = 8e-48
 Identities = 58/71 (81%), Positives = 63/71 (88%)
 Frame = -2

Query: 589 MEWPSSPLPSEGVGGYRRRGRTPWEIKEGEGEYKMRFDMPGMNKEDVKVWVEEKMLVVKA 410
           +EWPSSPLPSEGVGGYRRRGR PWEI+E EGEYKMRFDMPGMNKEDVKVWVEEKMLVVKA
Sbjct: 39  LEWPSSPLPSEGVGGYRRRGRAPWEIEECEGEYKMRFDMPGMNKEDVKVWVEEKMLVVKA 98

Query: 409 EKKAHMNDDDD 377
           EK      +++
Sbjct: 99  EKAPKKKQENE 109



 Score = 88.6 bits (218), Expect(2) = 8e-48
 Identities = 47/55 (85%), Positives = 48/55 (87%)
 Frame = -1

Query: 263 EVWSAKSYGRYSSRIALPENVQLENIKAEVKDGVLYITIPKATSCSSNILDIHVQ 99
           E WSAKSYGRYSSRIALP+NVQ ENIKAEVKDGVLYITIPKA S S  ILDI VQ
Sbjct: 118 EEWSAKSYGRYSSRIALPDNVQFENIKAEVKDGVLYITIPKAISYSC-ILDIQVQ 171


>gb|ADQ08650.1| chloroplast small heat shock protein 1 [Potentilla discolor]
           gi|311779822|gb|ADQ08651.1| chloroplast small heat shock
           protein 1 [Potentilla discolor]
          Length = 234

 Score =  100 bits (248), Expect(2) = 5e-40
 Identities = 51/64 (79%), Positives = 52/64 (81%)
 Frame = -2

Query: 571 PLPSEGVGGYRRRGRTPWEIKEGEGEYKMRFDMPGMNKEDVKVWVEEKMLVVKAEKKAHM 392
           PLP+E  GGY R GRTPWEIKE E EYKMRFDMPGM KEDVKVWVEEKMLVVKAEK A  
Sbjct: 113 PLPTES-GGYSR-GRTPWEIKEAETEYKMRFDMPGMTKEDVKVWVEEKMLVVKAEKAAKK 170

Query: 391 NDDD 380
             DD
Sbjct: 171 KKDD 174



 Score = 90.1 bits (222), Expect(2) = 5e-40
 Identities = 45/57 (78%), Positives = 51/57 (89%)
 Frame = -1

Query: 278 DDDDGEVWSAKSYGRYSSRIALPENVQLENIKAEVKDGVLYITIPKATSCSSNILDI 108
           ++++GE WSAKSYGRYSSRIALPEN+Q E IKAEVKDGVLYI+IPKA S SS ILDI
Sbjct: 179 EEEEGEEWSAKSYGRYSSRIALPENIQFEKIKAEVKDGVLYISIPKALS-SSKILDI 234


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