BLASTX nr result

ID: Glycyrrhiza24_contig00019917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019917
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623623.1| Pentatricopeptide repeat-containing protein ...   132   4e-29
ref|XP_002323670.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14

>ref|XP_003623623.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498638|gb|AES79841.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  132 bits (331), Expect = 4e-29
 Identities = 73/103 (70%), Positives = 85/103 (82%)
 Frame = -2

Query: 311 EVDVRMMGTLVRRLCKRSWKEKGMLLQDAYEVFEEMKERGLVVIDQRTLEVMVQALCRGK 132
           EVD RMMGTLVRRLCK SW+EKG LL+DA EVFE+MKERGLVV D+RT+EVMV+AL RG+
Sbjct: 353 EVDSRMMGTLVRRLCKLSWREKG-LLEDACEVFEKMKERGLVV-DKRTVEVMVEALFRGE 410

Query: 131 KFDEALANLSYMVELGYSPHGAINSIPFGKVIQGLCGRGRVEE 3
           KFDEAL NL+ MV  GYS  G    I F +VI+GLCG+GRV+E
Sbjct: 411 KFDEALVNLNDMVRWGYSLEG----IAFEEVIEGLCGQGRVDE 449


>ref|XP_002323670.1| predicted protein [Populus trichocarpa] gi|222868300|gb|EEF05431.1|
           predicted protein [Populus trichocarpa]
          Length = 535

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 50/103 (48%), Positives = 66/103 (64%)
 Frame = -2

Query: 311 EVDVRMMGTLVRRLCKRSWKEKGMLLQDAYEVFEEMKERGLVVIDQRTLEVMVQALCRGK 132
           E D R+M +LVR LC++S KE   L++ AYEVFE+MK+RG V I+Q T  +++QAL   K
Sbjct: 383 EADERLMNSLVRGLCRKSIKEND-LVEVAYEVFEKMKKRGFV-IEQSTYALVIQALWVAK 440

Query: 131 KFDEALANLSYMVELGYSPHGAINSIPFGKVIQGLCGRGRVEE 3
           K D+A  NL  MV LGY P      I    VIQ LC  G+V++
Sbjct: 441 KVDDAFINLHQMVRLGYIP----RLITINNVIQALCVGGKVDK 479


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