BLASTX nr result

ID: Glycyrrhiza24_contig00019903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019903
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630084.1| RING finger family protein [Medicago truncat...    96   4e-18
gb|AFK35856.1| unknown [Lotus japonicus]                               71   8e-11
ref|XP_003602018.1| RING finger family protein [Medicago truncat...    60   1e-07
ref|XP_002309999.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07

>ref|XP_003630084.1| RING finger family protein [Medicago truncatula]
           gi|355524106|gb|AET04560.1| RING finger family protein
           [Medicago truncatula]
          Length = 228

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 48/60 (80%), Positives = 51/60 (85%)
 Frame = +1

Query: 10  MTILSELLYQIYAKTIVLLTYMLIELILIIQYLKSEKRPITTTQYLSFIEEKNPTIHYTK 189
           MTILSELLYQ+Y KTIVL TYMLIELIL+I YLKS K PITTTQYL+FIEEKNPT    K
Sbjct: 1   MTILSELLYQLYVKTIVLFTYMLIELILVICYLKSTKNPITTTQYLNFIEEKNPTTRLKK 60


>gb|AFK35856.1| unknown [Lotus japonicus]
          Length = 164

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 35/61 (57%), Positives = 45/61 (73%)
 Frame = +1

Query: 10  MTILSELLYQIYAKTIVLLTYMLIELILIIQYLKSEKRPITTTQYLSFIEEKNPTIHYTK 189
           M  L++L  Q+ +K I+LLT +L+ELI+++  L SEKR ITT QYL FIEE NPTI Y K
Sbjct: 1   MKALTKLFQQLCSKIIILLTLLLVELIVLLWRLTSEKRSITTKQYLEFIEENNPTIRYAK 60

Query: 190 R 192
           R
Sbjct: 61  R 61


>ref|XP_003602018.1| RING finger family protein [Medicago truncatula]
           gi|355491066|gb|AES72269.1| RING finger family protein
           [Medicago truncatula]
          Length = 157

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
 Frame = +1

Query: 10  MTI-LSELLYQIYAKTIVLLTYMLIELILIIQYLKSEKRPITTTQYLSFIEEKNPTIHYT 186
           MT+ +S +  ++  K  +LL ++L+ELI+ I  L S+ + ITT QY+ FIEEKNPTI Y 
Sbjct: 1   MTVDISNVFQKLCNKIAILLIFVLVELIIFIWKLTSDTQSITTRQYIKFIEEKNPTIRYN 60

Query: 187 KRL 195
           K+L
Sbjct: 61  KKL 63


>ref|XP_002309999.1| predicted protein [Populus trichocarpa] gi|222852902|gb|EEE90449.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
 Frame = +1

Query: 10  MTILSELLYQIYAKTIVLLTYMLIELILIIQY-----LKSEKRPITTTQYLSFIEEKNPT 174
           M  LSE    +Y  +IV L+ +L+E++++ Q      LKS K  I+TTQYL  +EEKNPT
Sbjct: 1   MASLSEFFSHLYTMSIVFLSLLLVEIVILFQSVIGSTLKSNKPIISTTQYLKHMEEKNPT 60

Query: 175 IHYTKRL 195
           I Y+++L
Sbjct: 61  ISYSEKL 67


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