BLASTX nr result
ID: Glycyrrhiza24_contig00019903
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00019903 (201 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003630084.1| RING finger family protein [Medicago truncat... 96 4e-18 gb|AFK35856.1| unknown [Lotus japonicus] 71 8e-11 ref|XP_003602018.1| RING finger family protein [Medicago truncat... 60 1e-07 ref|XP_002309999.1| predicted protein [Populus trichocarpa] gi|2... 59 5e-07 >ref|XP_003630084.1| RING finger family protein [Medicago truncatula] gi|355524106|gb|AET04560.1| RING finger family protein [Medicago truncatula] Length = 228 Score = 95.5 bits (236), Expect = 4e-18 Identities = 48/60 (80%), Positives = 51/60 (85%) Frame = +1 Query: 10 MTILSELLYQIYAKTIVLLTYMLIELILIIQYLKSEKRPITTTQYLSFIEEKNPTIHYTK 189 MTILSELLYQ+Y KTIVL TYMLIELIL+I YLKS K PITTTQYL+FIEEKNPT K Sbjct: 1 MTILSELLYQLYVKTIVLFTYMLIELILVICYLKSTKNPITTTQYLNFIEEKNPTTRLKK 60 >gb|AFK35856.1| unknown [Lotus japonicus] Length = 164 Score = 71.2 bits (173), Expect = 8e-11 Identities = 35/61 (57%), Positives = 45/61 (73%) Frame = +1 Query: 10 MTILSELLYQIYAKTIVLLTYMLIELILIIQYLKSEKRPITTTQYLSFIEEKNPTIHYTK 189 M L++L Q+ +K I+LLT +L+ELI+++ L SEKR ITT QYL FIEE NPTI Y K Sbjct: 1 MKALTKLFQQLCSKIIILLTLLLVELIVLLWRLTSEKRSITTKQYLEFIEENNPTIRYAK 60 Query: 190 R 192 R Sbjct: 61 R 61 >ref|XP_003602018.1| RING finger family protein [Medicago truncatula] gi|355491066|gb|AES72269.1| RING finger family protein [Medicago truncatula] Length = 157 Score = 60.5 bits (145), Expect = 1e-07 Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%) Frame = +1 Query: 10 MTI-LSELLYQIYAKTIVLLTYMLIELILIIQYLKSEKRPITTTQYLSFIEEKNPTIHYT 186 MT+ +S + ++ K +LL ++L+ELI+ I L S+ + ITT QY+ FIEEKNPTI Y Sbjct: 1 MTVDISNVFQKLCNKIAILLIFVLVELIIFIWKLTSDTQSITTRQYIKFIEEKNPTIRYN 60 Query: 187 KRL 195 K+L Sbjct: 61 KKL 63 >ref|XP_002309999.1| predicted protein [Populus trichocarpa] gi|222852902|gb|EEE90449.1| predicted protein [Populus trichocarpa] Length = 163 Score = 58.5 bits (140), Expect = 5e-07 Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 5/67 (7%) Frame = +1 Query: 10 MTILSELLYQIYAKTIVLLTYMLIELILIIQY-----LKSEKRPITTTQYLSFIEEKNPT 174 M LSE +Y +IV L+ +L+E++++ Q LKS K I+TTQYL +EEKNPT Sbjct: 1 MASLSEFFSHLYTMSIVFLSLLLVEIVILFQSVIGSTLKSNKPIISTTQYLKHMEEKNPT 60 Query: 175 IHYTKRL 195 I Y+++L Sbjct: 61 ISYSEKL 67