BLASTX nr result

ID: Glycyrrhiza24_contig00019900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019900
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539635.1| PREDICTED: RNA-binding protein 28-like [Glyc...   192   3e-47
ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like [Glyc...   189   3e-46
ref|XP_003590983.1| Eukaryotic translation initiation factor 3 s...   179   3e-43
ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257...   167   2e-39
emb|CBI38027.3| unnamed protein product [Vitis vinifera]              164   8e-39

>ref|XP_003539635.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
          Length = 958

 Score =  192 bits (489), Expect = 3e-47
 Identities = 101/133 (75%), Positives = 111/133 (83%), Gaps = 8/133 (6%)
 Frame = -2

Query: 424 MGKKNKLKENDGTAKQHCASTLFVSNLPYSFSNSQLEETFSEVGPVRRCFMVTQKGSAQH 245
           MGKKNK+KEN G  K+HC+STLFVSNLPYSFSNSQLEETFSEVGPVRRCF+VTQKGSAQH
Sbjct: 1   MGKKNKVKENGG--KEHCSSTLFVSNLPYSFSNSQLEETFSEVGPVRRCFIVTQKGSAQH 58

Query: 244 RGFGYVQFAVEEDANRAIELKNGSSVGGRKIAVKHAMXXXXXXXRKSKPNQES------- 86
           RGFGYVQFAVEEDANRAIELKNG+SV GRKI VKHAM       R+SKPN+E        
Sbjct: 59  RGFGYVQFAVEEDANRAIELKNGTSVEGRKIVVKHAMPRPPCEERQSKPNKEGKTDDLTK 118

Query: 85  -KNDDKDSRLTGA 50
            K+DD+DS L+GA
Sbjct: 119 PKDDDEDSTLSGA 131


>ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
          Length = 956

 Score =  189 bits (480), Expect = 3e-46
 Identities = 99/133 (74%), Positives = 109/133 (81%), Gaps = 8/133 (6%)
 Frame = -2

Query: 424 MGKKNKLKENDGTAKQHCASTLFVSNLPYSFSNSQLEETFSEVGPVRRCFMVTQKGSAQH 245
           MGKKNK+KEN G  K+HC STLFVSNLPYSFSNSQLEETFS+VGPVRRCFMVTQKGSAQH
Sbjct: 1   MGKKNKVKENGG--KEHCPSTLFVSNLPYSFSNSQLEETFSQVGPVRRCFMVTQKGSAQH 58

Query: 244 RGFGYVQFAVEEDANRAIELKNGSSVGGRKIAVKHAMXXXXXXXRKSKPNQ--------E 89
           RGFGYVQFAVEEDANRAIELKNG+SV GRKI VKHAM       R+SKPNQ        +
Sbjct: 59  RGFGYVQFAVEEDANRAIELKNGTSVEGRKIVVKHAMPRPPREERQSKPNQAGKTDDLTK 118

Query: 88  SKNDDKDSRLTGA 50
            K+DD+D R +G+
Sbjct: 119 PKDDDEDGRSSGS 131


>ref|XP_003590983.1| Eukaryotic translation initiation factor 3 subunit G [Medicago
           truncatula] gi|355480031|gb|AES61234.1| Eukaryotic
           translation initiation factor 3 subunit G [Medicago
           truncatula]
          Length = 962

 Score =  179 bits (454), Expect = 3e-43
 Identities = 99/135 (73%), Positives = 108/135 (80%), Gaps = 10/135 (7%)
 Frame = -2

Query: 424 MGKKNK-LKEN-DGTAKQHCASTLFVSNLPYSFSNSQLEETFSEVGPVRRCFMVTQKGSA 251
           MGKKNK +KEN DGT KQ C  TLFVSNLPYSF+NSQLE+TFSEVGPVRRCFMVTQKGS 
Sbjct: 1   MGKKNKAMKENSDGTVKQ-CPLTLFVSNLPYSFTNSQLEQTFSEVGPVRRCFMVTQKGST 59

Query: 250 QHRGFGYVQFAVEEDANRAIELKNGSSVGGRKIAVKHAMXXXXXXXRKSKPNQ------- 92
           QHRGFGYVQFAVE+DAN+AIELKN S VG RKI VKHA+       R+SKP+Q       
Sbjct: 60  QHRGFGYVQFAVEKDANQAIELKNSSLVGDRKIVVKHAIPRPPRENRRSKPDQEGNEGDL 119

Query: 91  -ESKNDDKDSRLTGA 50
            ESKNDDKDS L+GA
Sbjct: 120 TESKNDDKDSELSGA 134



 Score = 55.1 bits (131), Expect = 9e-06
 Identities = 27/76 (35%), Positives = 41/76 (53%)
 Frame = -2

Query: 361 LFVSNLPYSFSNSQLEETFSEVGPVRRCFMVTQKGSAQHRGFGYVQFAVEEDANRAIELK 182
           L V NLP+    +++ + FS  G V   F+  +  +   +GF +V+F  ++DA  AI   
Sbjct: 284 LIVRNLPFKAKENEIRDAFSSAGTVWEVFIPQKSDTGLSKGFAFVKFTCKQDAENAIRKL 343

Query: 181 NGSSVGGRKIAVKHAM 134
           NGS  G R IAV  A+
Sbjct: 344 NGSKFGSRLIAVDWAV 359


>ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257200 [Vitis vinifera]
          Length = 972

 Score =  167 bits (422), Expect = 2e-39
 Identities = 84/117 (71%), Positives = 94/117 (80%)
 Frame = -2

Query: 424 MGKKNKLKENDGTAKQHCASTLFVSNLPYSFSNSQLEETFSEVGPVRRCFMVTQKGSAQH 245
           MGKKNK  E  G   QHC ST+FVSN PYSF+NSQLEETFS+VGP+RRCFMVTQKGS +H
Sbjct: 1   MGKKNKT-EGGGARDQHCPSTVFVSNFPYSFTNSQLEETFSDVGPIRRCFMVTQKGSTEH 59

Query: 244 RGFGYVQFAVEEDANRAIELKNGSSVGGRKIAVKHAMXXXXXXXRKSKPNQESKNDD 74
           RGFG+VQFAV+EDANRAIELKNGSS+GGRKI VK AM       R+SK NQ   +DD
Sbjct: 60  RGFGFVQFAVKEDANRAIELKNGSSIGGRKIGVKLAMHRTPLEQRRSKENQAVHSDD 116


>emb|CBI38027.3| unnamed protein product [Vitis vinifera]
          Length = 918

 Score =  164 bits (416), Expect = 8e-39
 Identities = 85/123 (69%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
 Frame = -2

Query: 424 MGKKNKLKENDGTAKQHCASTLFVSNLPYSFSNSQLEETFSEVGPVRRCFMVTQKGSAQH 245
           MGKKNK  E  G   QHC ST+FVSN PYSF+NSQLEETFS+VGP+RRCFMVTQKGS +H
Sbjct: 1   MGKKNKT-EGGGARDQHCPSTVFVSNFPYSFTNSQLEETFSDVGPIRRCFMVTQKGSTEH 59

Query: 244 RGFGYVQFAVEEDANRAIELKNGSSVGGRKIAVKHAMXXXXXXXRKSKPNQE---SKNDD 74
           RGFG+VQFAV+EDANRAIELKNGSS+GGRKI VK AM       R+SK NQ+       +
Sbjct: 60  RGFGFVQFAVKEDANRAIELKNGSSIGGRKIGVKLAMHRTPLEQRRSKENQDDIIKTRTE 119

Query: 73  KDS 65
           KDS
Sbjct: 120 KDS 122


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