BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019876
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173426.1| hypothetical protein NitaMp085 [Nicotiana tabac...   110   3e-35
ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncat...    79   2e-15
sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreduct...    79   3e-13
ref|XP_002534065.1| conserved hypothetical protein [Ricinus comm...    77   1e-12
emb|CBI23503.3| unnamed protein product [Vitis vinifera]               65   6e-09

>ref|YP_173426.1| hypothetical protein NitaMp085 [Nicotiana tabacum]
           gi|56806590|dbj|BAD83491.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 162

 Score =  110 bits (275), Expect(2) = 3e-35
 Identities = 60/75 (80%), Positives = 62/75 (82%), Gaps = 2/75 (2%)
 Frame = +3

Query: 108 SARESAGNNRKEGVHV--VRPPPS*SMGQQVRHLLKKREST*DNHASARQRVEWPRADLF 281
           SARESAGNNRKEGVHV  V  P   +  QQVRHLL+KREST DNH SARQRVEWPRADLF
Sbjct: 88  SARESAGNNRKEGVHVAAVSAPFLVNGAQQVRHLLQKRESTSDNHVSARQRVEWPRADLF 147

Query: 282 GYIIQVESGVTGTAV 326
           GYIIQVES VTG AV
Sbjct: 148 GYIIQVESRVTGKAV 162



 Score = 63.2 bits (152), Expect(2) = 3e-35
 Identities = 31/35 (88%), Positives = 32/35 (91%)
 Frame = +1

Query: 1   GTRFFDRGGMIAGPSPRSARWPIGIAAFGLCLPFL 105
           GTRFFDR GMIAGPSPRSA  PIGIAAFGLCLPF+
Sbjct: 49  GTRFFDRRGMIAGPSPRSA-LPIGIAAFGLCLPFI 82


>ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncatula]
           gi|355477400|gb|AES58603.1| NADH dehydrogenase subunit
           [Medicago truncatula]
          Length = 1094

 Score = 78.6 bits (192), Expect(2) = 2e-15
 Identities = 35/43 (81%), Positives = 38/43 (88%)
 Frame = +2

Query: 92  ACPFYLGPGKRWQQQKGRGPCSASAPFLVNGAAGSASTKKERI 220
           ACP YLGPGKRWQQQKGRGPCSASAPFLV+GAAGS++    RI
Sbjct: 429 ACPLYLGPGKRWQQQKGRGPCSASAPFLVDGAAGSSTFFSSRI 471



 Score = 28.5 bits (62), Expect(2) = 2e-15
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = +3

Query: 3   NTLFRPRWYD 32
           NTLFRPRWYD
Sbjct: 401 NTLFRPRWYD 410


>sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreductase chain 2; AltName:
           Full=NADH dehydrogenase subunit 2
           gi|12822|emb|CAA34728.1| NADH:ubiquinone reductase
           subunit 2 [Beta vulgaris subsp. vulgaris]
          Length = 515

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 69/180 (38%), Positives = 83/180 (46%), Gaps = 13/180 (7%)
 Frame = +1

Query: 1   GTRFFDRGGMIAGPSPRSARWPIGIAAFGLCLPFL---SRPGKALATTERKGSM*CV--- 162
           GTRFFDRGGMI GPSPRSARWPIGIAAFGLCL FL   S   +  A   RK  +      
Sbjct: 43  GTRFFDRGGMIFGPSPRSARWPIGIAAFGLCLLFLIKNSGSARESAGNNRKEGVHVAAAS 102

Query: 163 RPLLSQWGSRFGIY*KRENPLEIT--TPLLGSVWNGQERTFLDI*SKWRVELREQPSDGK 336
            P L    +      K     +IT  + +      G +     I    +VE     + G 
Sbjct: 103 APFLVNRAAGSATTTKERIHFKITNASAMAACGMAGSDLFGYII----QVESGVTGTAGL 158

Query: 337 LLSR---SVKRALFXXXXXXXXXXCEFPSGEFNTFWAPI--SRAPKTTPLPFGLHISFDS 501
           + +    SV+RALF                    FW P   S +P  TPLPFGL+I FDS
Sbjct: 159 MENNFHGSVQRALFSLRILRSLRVNSL--ARIQNFWGPSIPSSSPAKTPLPFGLNIFFDS 216



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 54/136 (39%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
 Frame = +3

Query: 108 SARESAGNNRKEGVHV--VRPPPS*SMGQQVRHLLKKREST*DNHASARQRVEWPRADLF 281
           SARESAGNNRKEGVHV     P   +         K+R      +ASA        +DLF
Sbjct: 83  SARESAGNNRKEGVHVAAASAPFLVNRAAGSATTTKERIHFKITNASAMAACGMAGSDLF 142

Query: 282 GYIIQVESGVTGTAV*WKTTFTFG*ESTFYFVENSAFPFV*IPQRRIQHFLGPHL--SSP 455
           GYIIQVESGVTGTA   +  F    +   + +       V     RIQ+F GP +  SSP
Sbjct: 143 GYIIQVESGVTGTAGLMENNFHGSVQRALFSLRILRSLRV-NSLARIQNFWGPSIPSSSP 201

Query: 456 EDDPPPLRTPYLF*LY 503
              P P      F  Y
Sbjct: 202 AKTPLPFGLNIFFDSY 217


>ref|XP_002534065.1| conserved hypothetical protein [Ricinus communis]
           gi|223525904|gb|EEF28320.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 83

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 45/75 (60%), Positives = 50/75 (66%), Gaps = 7/75 (9%)
 Frame = +1

Query: 1   GTRFFDRGGMIAGPSPRSARWPIGIAAFGLCLPFLSRPGKALATTER------KGSM*C- 159
           GTRFF+RGGMIAGPSPRSARWPIG ++    LP LS     L   ER      KG   C 
Sbjct: 10  GTRFFNRGGMIAGPSPRSARWPIGDSSL-QALPALSNKNFRLDPRERWQQHKGKGPCSCY 68

Query: 160 VRPLLSQWGSRFGIY 204
           VRPLLS+WGS+F IY
Sbjct: 69  VRPLLSKWGSKFDIY 83


>emb|CBI23503.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 33/48 (68%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
 Frame = +1

Query: 112 PGKALATTERKGSM*C-VRPLLSQWGSRFGIY*KRENPLEITTPLLGS 252
           PGK     + +G   C  RPLLSQWGSRFGIY KRENPL+ITTPLLGS
Sbjct: 197 PGKRWQQQKGRGPCSCCARPLLSQWGSRFGIYYKRENPLQITTPLLGS 244