BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019857
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003604902.1| Pentatricopeptide repeat-containing protein ...   194   5e-48
ref|XP_003530408.1| PREDICTED: pentatricopeptide repeat-containi...   179   2e-43
ref|XP_003545945.1| PREDICTED: pentatricopeptide repeat-containi...   179   3e-43
ref|XP_002531466.1| pentatricopeptide repeat-containing protein,...   142   4e-32
ref|XP_003631455.1| PREDICTED: pentatricopeptide repeat-containi...   138   4e-31

>ref|XP_003604902.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355505957|gb|AES87099.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 449

 Score =  194 bits (494), Expect = 5e-48
 Identities = 91/133 (68%), Positives = 110/133 (82%), Gaps = 1/133 (0%)
 Frame = -1

Query: 397 DTLYGHLHGKTNG-SVENSLSKAKPQLDSQCVLQFLSRCCPKQAQLGARIFIWAGFQSGY 221
           DTLY HL+ KTNG ++EN+LSK KP+LDSQCV+Q L++C PKQ+QLG R FIWAGFQSGY
Sbjct: 8   DTLYTHLN-KTNGITIENALSKTKPKLDSQCVIQVLNKCFPKQSQLGVRFFIWAGFQSGY 66

Query: 220 RHSAYMYRKACNLLGIDQNPMVIYDLIQSYEAEGCVVTANMFRVVLRLCKEAQLADVALW 41
           RHS YMYRK CNL  ID+NP +I D+I++YE +GCVV  NMFR VL+LCKEA+  D+ LW
Sbjct: 67  RHSGYMYRKVCNLFEIDKNPEIICDVIKAYEVDGCVVNVNMFREVLKLCKEAENVDLGLW 126

Query: 40  VLRKMEDFNLHPD 2
           VLRKMEDF + PD
Sbjct: 127 VLRKMEDFEMKPD 139


>ref|XP_003530408.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g47360-like [Glycine max]
          Length = 475

 Score =  179 bits (454), Expect = 2e-43
 Identities = 92/135 (68%), Positives = 107/135 (79%), Gaps = 3/135 (2%)
 Frame = -1

Query: 397 DTLYGHLHGKTNGSVENSLSKAKPQLDSQCVLQFLSRCC--PKQAQLGARIFIWAGFQSG 224
           D L  HLH ++NGSVE+SLSK KP+LDSQ ++Q L+ C   P Q QLG R F+WAGFQSG
Sbjct: 28  DVLCSHLH-QSNGSVEHSLSKVKPKLDSQSIIQVLNTCRDRPYQPQLGVRFFVWAGFQSG 86

Query: 223 YRHSAYMYRKACNLLGIDQNPMVIYDLIQSYEAEGCVVTANMFRVVLRLCKEAQLADVAL 44
           YRHS+YMY KA  LL I  NP +I D+I+SYEAEG +VT NMFR VL+LCKEAQLAD+AL
Sbjct: 87  YRHSSYMYTKASYLLRIHHNPQIIRDVIESYEAEGSLVTVNMFREVLKLCKEAQLADMAL 146

Query: 43  WVLRKMED-FNLHPD 2
           WVLRKMED FNLH D
Sbjct: 147 WVLRKMEDTFNLHAD 161


>ref|XP_003545945.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g47360-like [Glycine max]
          Length = 617

 Score =  179 bits (453), Expect = 3e-43
 Identities = 91/133 (68%), Positives = 106/133 (79%), Gaps = 1/133 (0%)
 Frame = -1

Query: 397 DTLYGHLHGKTNGSVENSLSKAKPQLDSQCVLQFLSRCCPKQAQLGARIFIWAGFQSGYR 218
           D L  HLH ++NGSVENSLS  KP+LDSQ ++Q L+ C P   QLG R F+WAGFQSGYR
Sbjct: 200 DILCSHLH-QSNGSVENSLSMVKPKLDSQSIIQVLNTCPP---QLGVRFFVWAGFQSGYR 255

Query: 217 HSAYMYRKACNLLGIDQNPMVIYDLIQSYEAEGCVVTANMFRVVLRLCKEAQLADVALWV 38
           HS+YMY KA NLL I  NP +I D+I+SYEAEG +VT NMFR VL+LCKEA+LAD+ALWV
Sbjct: 256 HSSYMYTKASNLLRIHHNPQIIRDVIESYEAEGSLVTVNMFREVLKLCKEARLADMALWV 315

Query: 37  LRKMED-FNLHPD 2
           LRKMED FNLH D
Sbjct: 316 LRKMEDTFNLHAD 328


>ref|XP_002531466.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528920|gb|EEF30916.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 518

 Score =  142 bits (357), Expect = 4e-32
 Identities = 66/132 (50%), Positives = 88/132 (66%)
 Frame = -1

Query: 397 DTLYGHLHGKTNGSVENSLSKAKPQLDSQCVLQFLSRCCPKQAQLGARIFIWAGFQSGYR 218
           D LY HL    N +VE SL+  KP+LD++CV + L +C    +Q+G R F+WAG+QS YR
Sbjct: 32  DKLYTHLQNNPN-NVEKSLNSIKPKLDTRCVTEVLHKCSLNNSQIGLRFFVWAGYQSNYR 90

Query: 217 HSAYMYRKACNLLGIDQNPMVIYDLIQSYEAEGCVVTANMFRVVLRLCKEAQLADVALWV 38
           HS+++Y KAC L  I QNP  + DL + Y AE CVV    F+VVL LCKE  LA+ A  V
Sbjct: 91  HSSFLYSKACKLFNIKQNPQAVLDLFEFYRAEKCVVNLKTFKVVLNLCKEGTLANEAFLV 150

Query: 37  LRKMEDFNLHPD 2
           LRKM++F++  D
Sbjct: 151 LRKMQEFDIQAD 162


>ref|XP_003631455.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g47360-like [Vitis vinifera]
          Length = 638

 Score =  138 bits (348), Expect = 4e-31
 Identities = 67/129 (51%), Positives = 88/129 (68%)
 Frame = -1

Query: 388 YGHLHGKTNGSVENSLSKAKPQLDSQCVLQFLSRCCPKQAQLGARIFIWAGFQSGYRHSA 209
           Y HL  K   ++E +L   + +LDS CV + L+RC   Q+QLG R FIWAG QS YRHS+
Sbjct: 32  YTHLQ-KYGDNIEKTLPAVRAKLDSSCVNEVLNRCSLTQSQLGLRFFIWAGVQSYYRHSS 90

Query: 208 YMYRKACNLLGIDQNPMVIYDLIQSYEAEGCVVTANMFRVVLRLCKEAQLADVALWVLRK 29
           Y+Y KAC L  I+QNP  I D+I++Y  EG VV+   F VVL L +EA+LAD ALW+L+K
Sbjct: 91  YLYSKACELFRINQNPRAIIDVIEAYRVEGTVVSVKTFNVVLHLLREAKLADEALWILKK 150

Query: 28  MEDFNLHPD 2
           M +FN+  D
Sbjct: 151 MAEFNIRAD 159