BLASTX nr result

ID: Glycyrrhiza24_contig00019852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019852
         (788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539224.1| PREDICTED: cyclin-T1-4-like [Glycine max]         246   4e-63
ref|XP_002517211.1| Cyclin-L1, putative [Ricinus communis] gi|22...   242   6e-62
ref|XP_003536540.1| PREDICTED: cyclin-T1-4-like [Glycine max]         240   2e-61
ref|XP_003592426.1| Cyclin T1 [Medicago truncatula] gi|355481474...   240   3e-61
gb|AAR01224.1| cyclin T1 [Medicago truncatula]                        240   3e-61

>ref|XP_003539224.1| PREDICTED: cyclin-T1-4-like [Glycine max]
          Length = 372

 Score =  246 bits (628), Expect = 4e-63
 Identities = 126/169 (74%), Positives = 137/169 (81%)
 Frame = -3

Query: 786 SHACHDRFLIATAALFLAGKSEETPRPLDIVLQASIETLHRQDFTLLSYLLPVDWFAKCH 607
           SHACHDRFLIATAALFL GKSEETP PL+ VLQAS E LH QDFTLLSYLLPV WF K H
Sbjct: 203 SHACHDRFLIATAALFLVGKSEETPCPLNNVLQASSEILHEQDFTLLSYLLPVGWFEKYH 262

Query: 606 DRXXXXXXXXXXXXXXXLNVQHPYDPLISVLDKLGPSKTVLVNLALNLVSEGLRSSLWLQ 427
           DR               LNV+HPY  L SVL+KL PSKTVLVNLALNL+S+GL+SSLWLQ
Sbjct: 263 DRVLEAELLLLTTLNFELNVEHPYTSLTSVLNKLDPSKTVLVNLALNLISKGLQSSLWLQ 322

Query: 426 FKPRHIAAGAAYLASKFLNMDLTAHQNIWQEFQATPSILRDVSQQLMEL 280
           +KP HIAAGAAYLAS FL +DLTA+ NIWQEF+ATPSILRD+SQQLMEL
Sbjct: 323 YKPHHIAAGAAYLASMFLKIDLTAYHNIWQEFEATPSILRDISQQLMEL 371


>ref|XP_002517211.1| Cyclin-L1, putative [Ricinus communis] gi|223543846|gb|EEF45374.1|
           Cyclin-L1, putative [Ricinus communis]
          Length = 403

 Score =  242 bits (618), Expect = 6e-62
 Identities = 121/170 (71%), Positives = 140/170 (82%)
 Frame = -3

Query: 786 SHACHDRFLIATAALFLAGKSEETPRPLDIVLQASIETLHRQDFTLLSYLLPVDWFAKCH 607
           SHACHDRFLIATAALFLA KSEETPRPL+ +L+AS E LH+QD +LLSYLLPVDWF +  
Sbjct: 234 SHACHDRFLIATAALFLASKSEETPRPLNNMLRASSEILHKQDMSLLSYLLPVDWFEQYR 293

Query: 606 DRXXXXXXXXXXXXXXXLNVQHPYDPLISVLDKLGPSKTVLVNLALNLVSEGLRSSLWLQ 427
           +R               LNVQHPY PL SVL+K+G S+TVLVNLALNL+SEGLRSSLWLQ
Sbjct: 294 ERVIEAEQMILTTLNFELNVQHPYAPLTSVLNKIGFSQTVLVNLALNLISEGLRSSLWLQ 353

Query: 426 FKPRHIAAGAAYLASKFLNMDLTAHQNIWQEFQATPSILRDVSQQLMELF 277
           FKP HIAAGAAYLA++FLN+DL  +QNIWQEFQ TP+I++DV+QQLMELF
Sbjct: 354 FKPHHIAAGAAYLAARFLNLDLACYQNIWQEFQTTPAIIQDVAQQLMELF 403


>ref|XP_003536540.1| PREDICTED: cyclin-T1-4-like [Glycine max]
          Length = 372

 Score =  240 bits (613), Expect = 2e-61
 Identities = 125/170 (73%), Positives = 135/170 (79%)
 Frame = -3

Query: 786 SHACHDRFLIATAALFLAGKSEETPRPLDIVLQASIETLHRQDFTLLSYLLPVDWFAKCH 607
           SHACHDRFLIATAALFL  KSEE PR L+ VL+ S E L++QDF LLSY  PVDWF +  
Sbjct: 203 SHACHDRFLIATAALFLTAKSEEAPRHLNNVLRTSSEILYKQDFALLSYRFPVDWFEQYR 262

Query: 606 DRXXXXXXXXXXXXXXXLNVQHPYDPLISVLDKLGPSKTVLVNLALNLVSEGLRSSLWLQ 427
           +R               LNVQHPY PL SVL+KLG SKTVLVNLALNLVSEGLRSSLWLQ
Sbjct: 263 ERVLEAEQLILTTLNFELNVQHPYVPLTSVLNKLGLSKTVLVNLALNLVSEGLRSSLWLQ 322

Query: 426 FKPRHIAAGAAYLASKFLNMDLTAHQNIWQEFQATPSILRDVSQQLMELF 277
           FKP HIAAGAAYLA+KFLNMDL A+QNIWQEFQ TPSIL+DVSQQLMELF
Sbjct: 323 FKPHHIAAGAAYLAAKFLNMDLAAYQNIWQEFQTTPSILQDVSQQLMELF 372


>ref|XP_003592426.1| Cyclin T1 [Medicago truncatula] gi|355481474|gb|AES62677.1| Cyclin
           T1 [Medicago truncatula]
          Length = 433

 Score =  240 bits (612), Expect = 3e-61
 Identities = 123/170 (72%), Positives = 136/170 (80%)
 Frame = -3

Query: 786 SHACHDRFLIATAALFLAGKSEETPRPLDIVLQASIETLHRQDFTLLSYLLPVDWFAKCH 607
           SHACHDRFLIATAALFLAGKSEE+P PL+ VL+ S E LH+QDF  LSY  PVDWF +  
Sbjct: 264 SHACHDRFLIATAALFLAGKSEESPCPLNSVLRTSSELLHKQDFAFLSYWFPVDWFEQYR 323

Query: 606 DRXXXXXXXXXXXXXXXLNVQHPYDPLISVLDKLGPSKTVLVNLALNLVSEGLRSSLWLQ 427
           +R               L VQHPY PL SVL+KLG SKTVLVN+ALNLVSEGLRSSLWLQ
Sbjct: 324 ERVLEAEQLILTTLNFELGVQHPYAPLTSVLNKLGLSKTVLVNMALNLVSEGLRSSLWLQ 383

Query: 426 FKPRHIAAGAAYLASKFLNMDLTAHQNIWQEFQATPSILRDVSQQLMELF 277
           FKP  IAAGAAYLA+KFLNMDL A++NIWQEFQATPS+L+DVSQQLMELF
Sbjct: 384 FKPHQIAAGAAYLAAKFLNMDLAAYKNIWQEFQATPSVLQDVSQQLMELF 433


>gb|AAR01224.1| cyclin T1 [Medicago truncatula]
          Length = 372

 Score =  240 bits (612), Expect = 3e-61
 Identities = 123/170 (72%), Positives = 136/170 (80%)
 Frame = -3

Query: 786 SHACHDRFLIATAALFLAGKSEETPRPLDIVLQASIETLHRQDFTLLSYLLPVDWFAKCH 607
           SHACHDRFLIATAALFLAGKSEE+P PL+ VL+ S E LH+QDF  LSY  PVDWF +  
Sbjct: 203 SHACHDRFLIATAALFLAGKSEESPCPLNSVLRTSSELLHKQDFAFLSYWFPVDWFEQYR 262

Query: 606 DRXXXXXXXXXXXXXXXLNVQHPYDPLISVLDKLGPSKTVLVNLALNLVSEGLRSSLWLQ 427
           +R               L VQHPY PL SVL+KLG SKTVLVN+ALNLVSEGLRSSLWLQ
Sbjct: 263 ERVLEAEQLILTTLNFELGVQHPYAPLTSVLNKLGLSKTVLVNMALNLVSEGLRSSLWLQ 322

Query: 426 FKPRHIAAGAAYLASKFLNMDLTAHQNIWQEFQATPSILRDVSQQLMELF 277
           FKP  IAAGAAYLA+KFLNMDL A++NIWQEFQATPS+L+DVSQQLMELF
Sbjct: 323 FKPHQIAAGAAYLAAKFLNMDLAAYKNIWQEFQATPSVLQDVSQQLMELF 372


Top