BLASTX nr result

ID: Glycyrrhiza24_contig00019828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019828
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-li...   211   5e-53
ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-li...   210   1e-52
ref|XP_003626059.1| Condensin-2 complex subunit D3 [Medicago tru...   193   1e-47
ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|22...   170   2e-40

>ref|XP_003533347.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1334

 Score =  211 bits (538), Expect = 5e-53
 Identities = 123/192 (64%), Positives = 135/192 (70%), Gaps = 3/192 (1%)
 Frame = -2

Query: 568  LAAASDGMLNIEDATGQSVLQDAFQILGCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 389
            LAAASDGMLNIEDATGQSVLQDAFQILGCK                              
Sbjct: 1082 LAAASDGMLNIEDATGQSVLQDAFQILGCKEIRISSTRASSESADVEEEGGESGSAARGK 1141

Query: 388  XAITQAVKKGLIQNTVPIFIELKRLLETKNSPLIGSLMECLRVLLKDYKNEIDDILVADK 209
              ITQAVKKGLIQNTVPIFIELKRLLETKNSPLIGSLMECLR++LKDYKNEIDDILVADK
Sbjct: 1142 T-ITQAVKKGLIQNTVPIFIELKRLLETKNSPLIGSLMECLRIILKDYKNEIDDILVADK 1200

Query: 208  QLQKELIYDMQKFXXXXXXXXXXXXXXSRP---NQSSPDVSKNLTKTQRKTLGQSKYSNK 38
            QLQKELIYD++K+              ++P   +  SPD SKNLTKTQ +T+GQS  SN+
Sbjct: 1201 QLQKELIYDIKKYEAAKAKATVAEAVGTKPKSVSNQSPDASKNLTKTQGQTVGQS--SNE 1258

Query: 37   FPSGSKVASAMA 2
             PS S+VASAMA
Sbjct: 1259 LPSDSRVASAMA 1270


>ref|XP_003547378.1| PREDICTED: condensin-2 complex subunit D3-like [Glycine max]
          Length = 1324

 Score =  210 bits (535), Expect = 1e-52
 Identities = 123/192 (64%), Positives = 134/192 (69%), Gaps = 3/192 (1%)
 Frame = -2

Query: 568  LAAASDGMLNIEDATGQSVLQDAFQILGCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 389
            LAAASDGMLNIEDATGQSVLQDAFQILGCK                              
Sbjct: 1072 LAAASDGMLNIEDATGQSVLQDAFQILGCKEIRISSTRASSESADVEEEGGENGSAARRK 1131

Query: 388  XAITQAVKKGLIQNTVPIFIELKRLLETKNSPLIGSLMECLRVLLKDYKNEIDDILVADK 209
              ITQAVKKGLIQNTVPIFIELKRLLETKNSPLIGSLMECLR++LKDYKNEIDDILVADK
Sbjct: 1132 A-ITQAVKKGLIQNTVPIFIELKRLLETKNSPLIGSLMECLRIILKDYKNEIDDILVADK 1190

Query: 208  QLQKELIYDMQKFXXXXXXXXXXXXXXSRPNQSS---PDVSKNLTKTQRKTLGQSKYSNK 38
            QLQKELIYD+QK+              ++P   S    DVSKNLTKTQ +T+GQS  SN+
Sbjct: 1191 QLQKELIYDIQKYEAAKAKATVAEAVGTKPKSGSNQLADVSKNLTKTQEQTVGQS--SNE 1248

Query: 37   FPSGSKVASAMA 2
             PS S+VASA+A
Sbjct: 1249 LPSDSRVASAIA 1260


>ref|XP_003626059.1| Condensin-2 complex subunit D3 [Medicago truncatula]
            gi|355501074|gb|AES82277.1| Condensin-2 complex subunit
            D3 [Medicago truncatula]
          Length = 854

 Score =  193 bits (491), Expect = 1e-47
 Identities = 117/194 (60%), Positives = 127/194 (65%), Gaps = 5/194 (2%)
 Frame = -2

Query: 568  LAAASDGMLNIEDATGQSVLQD--AFQILGCKXXXXXXXXXXXXXXXXXXXXXXXXXXXX 395
            LAA SDGMLNIEDAT QSVL+D   FQILGCK                            
Sbjct: 605  LAAVSDGMLNIEDATEQSVLRDQNTFQILGCKEIHIQSARVSSESADLEEEGGENGSSTR 664

Query: 394  XXXAITQAVKKGLIQNTVPIFIELKRLLETKNSPLIGSLMECLRVLLKDYKNEIDDILVA 215
                ITQAVKKGLIQNT+PIFIELK LLETKNSPLIGSLMECLRVLLKDYKNEIDDILVA
Sbjct: 665  KA--ITQAVKKGLIQNTIPIFIELKCLLETKNSPLIGSLMECLRVLLKDYKNEIDDILVA 722

Query: 214  DKQLQKELIYDMQKFXXXXXXXXXXXXXXSRPN---QSSPDVSKNLTKTQRKTLGQSKYS 44
            DKQLQKELIYDMQK+              ++P      SPDVSKNLTK   +T  Q+  S
Sbjct: 723  DKQLQKELIYDMQKYEAAKAKATVAEAIAAKPKSGANQSPDVSKNLTKEHGQTQVQNVDS 782

Query: 43   NKFPSGSKVASAMA 2
            +  PSGS++ASAMA
Sbjct: 783  DMLPSGSRIASAMA 796


>ref|XP_002315519.1| predicted protein [Populus trichocarpa] gi|222864559|gb|EEF01690.1|
            predicted protein [Populus trichocarpa]
          Length = 1272

 Score =  172 bits (437), Expect = 3e-41
 Identities = 106/192 (55%), Positives = 117/192 (60%), Gaps = 3/192 (1%)
 Frame = -2

Query: 568  LAAASDGMLNIEDATGQSVLQDAFQILGCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 389
            LAAASDGML +ED  GQSVLQDAFQIL CK                              
Sbjct: 1017 LAAASDGMLKLEDVRGQSVLQDAFQILACKEIRIPSGRGSQTDAGDVEEESGDGGVSAAA 1076

Query: 388  XA---ITQAVKKGLIQNTVPIFIELKRLLETKNSPLIGSLMECLRVLLKDYKNEIDDILV 218
                 ITQAVKKGLIQNT+PIFIELKRLLE+KNSPL GSLMECLR++LKDYKNEID+ILV
Sbjct: 1077 AKRGAITQAVKKGLIQNTIPIFIELKRLLESKNSPLTGSLMECLRIILKDYKNEIDEILV 1136

Query: 217  ADKQLQKELIYDMQKFXXXXXXXXXXXXXXSRPNQSSPDVSKNLTKTQRKTLGQSKYSNK 38
            ADKQLQKELIYDMQK+              S  N SS  +S   +KT   T  Q   +  
Sbjct: 1137 ADKQLQKELIYDMQKYETSKAKSAAAVVVASMQNHSS-FLSPGASKTAGGTKAQDNLNEN 1195

Query: 37   FPSGSKVASAMA 2
              S S+VASAMA
Sbjct: 1196 PQSDSRVASAMA 1207


>ref|XP_002516933.1| condensin, putative [Ricinus communis] gi|223544021|gb|EEF45547.1|
            condensin, putative [Ricinus communis]
          Length = 1313

 Score =  170 bits (430), Expect = 2e-40
 Identities = 102/195 (52%), Positives = 121/195 (62%), Gaps = 6/195 (3%)
 Frame = -2

Query: 568  LAAASDGMLNIEDATGQSVLQDAFQILGCKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 389
            LAAASDGML+IED  GQ+VLQDAFQIL CK                              
Sbjct: 1057 LAAASDGMLSIEDIAGQAVLQDAFQILACKEIRISPGRSSQTDAGEIEDEGGESGASAAA 1116

Query: 388  XA---ITQAVKKGLIQNTVPIFIELKRLLETKNSPLIGSLMECLRVLLKDYKNEIDDILV 218
                 +TQA++KGLIQNT+PIFIELKRLLE+KNS L+GSLMECLR+LLKDYKNEIDDILV
Sbjct: 1117 AKGRAVTQAIRKGLIQNTIPIFIELKRLLESKNSLLMGSLMECLRILLKDYKNEIDDILV 1176

Query: 217  ADKQLQKELIYDMQKFXXXXXXXXXXXXXXSRPNQS---SPDVSKNLTKTQRKTLGQSKY 47
            ADKQLQKELIYDMQK+              +    S   SP V K   +T +   GQ+K+
Sbjct: 1177 ADKQLQKELIYDMQKYESNEAKITAAQAVATMQKPSSFLSPGVPKTANRTAQ---GQNKF 1233

Query: 46   SNKFPSGSKVASAMA 2
             +   + ++VASAMA
Sbjct: 1234 PDNLHNDARVASAMA 1248


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