BLASTX nr result

ID: Glycyrrhiza24_contig00019812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019812
         (1039 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547155.1| PREDICTED: zinc finger CCCH domain-containin...   466   e-129
ref|XP_003593623.1| Zinc finger CCCH domain-containing protein [...   386   e-105
ref|XP_003541728.1| PREDICTED: zinc finger CCCH domain-containin...   304   3e-80
ref|XP_002329830.1| predicted protein [Populus trichocarpa] gi|2...   180   4e-43
ref|XP_004155642.1| PREDICTED: uncharacterized protein LOC101231...   125   2e-26

>ref|XP_003547155.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like
            [Glycine max]
          Length = 713

 Score =  466 bits (1200), Expect = e-129
 Identities = 246/350 (70%), Positives = 281/350 (80%), Gaps = 4/350 (1%)
 Frame = +2

Query: 2    FPMRDSLFPENRFAFNASNNYYGPNLSSYLSRAEGMAAIRNQPMYKGYTPTVLSHSPNSS 181
            FP RD+LFP+NRF F+AS+NY  PNLS   + A+GMA  RNQ MYKGYT T+LSHSPNSS
Sbjct: 305  FPPRDNLFPDNRFPFSASDNYLSPNLSLNSTCADGMATPRNQHMYKGYTSTLLSHSPNSS 364

Query: 182  GVSQLPATSVSLSHRILGQSGCSLPFGSSLGASYLDSQKLLNSEKEYHAPKSTFSGSERD 361
             V+Q  A+S+SLSHRIL QSG SLPF SSLGAS +DS K LN++KEY   KSTFSGS R+
Sbjct: 365  LVTQFAASSMSLSHRILAQSGRSLPFSSSLGASNVDSLKFLNTDKEYLTSKSTFSGSGRE 424

Query: 362  DLPLVGTSRVPPHSTGYISKIRSYDWEPSVPFRPSFFITSMNVSSPGNLYDPLCDSIEIP 541
            D  LV +SRVP +  GY SKI SYDWEPSVPFRPSFFITSMNVSSPG+LYDPL DSIEIP
Sbjct: 425  DFSLVSSSRVPSYPAGYKSKICSYDWEPSVPFRPSFFITSMNVSSPGDLYDPLRDSIEIP 484

Query: 542  NIGDGSLKASLLIQGSSIQASSQVRTYGDSAVVGKHISDLNDEKSSVSSH----ENEPYK 709
            NIGDGSLKASLLI GS++Q SSQVRTYGDSAVVG+H+S+LND+KSSVSSH    ENEP K
Sbjct: 485  NIGDGSLKASLLIHGSNVQVSSQVRTYGDSAVVGEHMSNLNDDKSSVSSHNKFCENEPNK 544

Query: 710  NSVLREKDCLATETETTSGTNYQNGKVGVGQHTFSVEDIMKREKKRTEHDARHHGEGSRL 889
            N +  EKDCL  ETE TSGT YQ GK+G+GQHTF V D  K E+  TE DAR HGEGS  
Sbjct: 545  NCLPHEKDCLPPETEITSGT-YQ-GKMGMGQHTFGVADSTKNERDVTECDARRHGEGSGH 602

Query: 890  KKKREGKDKNINEMEVDFQMDSSVNKETKVLRNFRAALVDLVKELLKPSW 1039
            KKKR  +DK  +EM+VDFQ+D S+ KE+K L+ FRAALVD VKELLKP+W
Sbjct: 603  KKKRVDRDKKNHEMDVDFQIDGSIQKESKALKFFRAALVDHVKELLKPAW 652


>ref|XP_003593623.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
            gi|355482671|gb|AES63874.1| Zinc finger CCCH
            domain-containing protein [Medicago truncatula]
          Length = 892

 Score =  386 bits (991), Expect = e-105
 Identities = 219/352 (62%), Positives = 245/352 (69%), Gaps = 6/352 (1%)
 Frame = +2

Query: 2    FPMRDSLFPENRFAFNASNNYYGPNLSSYLSRAEGMAAIRNQPMYKGYTPTVLSHSPNSS 181
            F MRDSLFPEN+ AFN SNNY+  NLSSY SRAE M AIRNQ MY+GYT T         
Sbjct: 523  FLMRDSLFPENKSAFNTSNNYFSSNLSSYSSRAEEMIAIRNQHMYRGYTSTK-------- 574

Query: 182  GVSQLPATSVSLSHRILGQSGCSLPFGSSLGASYLDSQKLLNSEKEYHAPKSTFSGSERD 361
                                     F S LGAS LDS          HA KS+FS S+R+
Sbjct: 575  ------------------------DFSSPLGASALDS----------HAHKSSFS-SDRE 599

Query: 362  DLPLVGTSRVPPHSTGYISKIRSYDWEPSVPFRPSFFITSMNVSSPGNLYDPLCDSIEIP 541
            D  LVG+SRV PH+ GY  K RS +WEPSVPFRPSFFITSMNVSSP +LYDPL +SIEIP
Sbjct: 600  DFHLVGSSRVAPHANGYTLKTRS-NWEPSVPFRPSFFITSMNVSSPRDLYDPLRNSIEIP 658

Query: 542  NIGDGSLKASLLIQGSSIQASSQVRTYGDSAVVGKHISDLNDEKSSVSSH----ENEPYK 709
            NIGDGSLKASLLI+GSS+QASSQVRTY DSA VGK +SD+ND+KSSVSSH    ENEP +
Sbjct: 659  NIGDGSLKASLLIRGSSVQASSQVRTYDDSAAVGKQMSDVNDDKSSVSSHHKFYENEPNR 718

Query: 710  NSVLREKDCLATETETTSGT--NYQNGKVGVGQHTFSVEDIMKREKKRTEHDARHHGEGS 883
            +SV R KDCLAT+ E TSGT  NYQNG +GVGQ+ F VED ++  KKRTEHDARHH + S
Sbjct: 719  SSVPRGKDCLATKAEITSGTCANYQNGDIGVGQYAFGVEDRIETLKKRTEHDARHHSDES 778

Query: 884  RLKKKREGKDKNINEMEVDFQMDSSVNKETKVLRNFRAALVDLVKELLKPSW 1039
              KK R  KD   +EMEVDFQ D SV KETK L+ F A LVDLVKELLKP W
Sbjct: 779  EHKKNRVAKDNKFHEMEVDFQTDGSVLKETKTLKIFHAVLVDLVKELLKPFW 830


>ref|XP_003541728.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like
           [Glycine max]
          Length = 521

 Score =  304 bits (778), Expect = 3e-80
 Identities = 161/230 (70%), Positives = 185/230 (80%), Gaps = 4/230 (1%)
 Frame = +2

Query: 2   FPMRDSLFPENRFAFNASNNYYGPNLSSYLSRAEGMAAIRNQPMYKGYTPTVLSHSPNSS 181
           FP+RD+L PENRF F+AS+NY+  NLS   +RA+GMA +RNQ MYK YT T+LSHSPNSS
Sbjct: 297 FPLRDNLVPENRFPFSASDNYFSSNLSLTSTRADGMATLRNQHMYKRYTSTLLSHSPNSS 356

Query: 182 GVSQLPATSVSLSHRILGQSGCSLPFGSSLGASYLDSQKLLNSEKEYHAPKSTFSGSE-- 355
            VSQ PA+S+ LS +IL QSG SL F      S +DS+K LN++KEY   KSTFSGS   
Sbjct: 357 LVSQFPASSMPLSQQILAQSGRSLSF------SNVDSKKFLNTDKEYLTSKSTFSGSGSG 410

Query: 356 --RDDLPLVGTSRVPPHSTGYISKIRSYDWEPSVPFRPSFFITSMNVSSPGNLYDPLCDS 529
             R+D  LV  SRVP +  GY SKI SYDWEPSVPFRPSFFITSMNVSSPG+LYDPL DS
Sbjct: 411 SGREDFSLVNLSRVPSYPAGYKSKICSYDWEPSVPFRPSFFITSMNVSSPGDLYDPLRDS 470

Query: 530 IEIPNIGDGSLKASLLIQGSSIQASSQVRTYGDSAVVGKHISDLNDEKSS 679
           IEIPNIGDGSLKASLLI GS+IQASSQVRTYGDSAVVGKH+++LND+KSS
Sbjct: 471 IEIPNIGDGSLKASLLIHGSNIQASSQVRTYGDSAVVGKHMANLNDDKSS 520


>ref|XP_002329830.1| predicted protein [Populus trichocarpa] gi|222870892|gb|EEF08023.1|
            predicted protein [Populus trichocarpa]
          Length = 669

 Score =  180 bits (457), Expect = 4e-43
 Identities = 121/298 (40%), Positives = 160/298 (53%), Gaps = 15/298 (5%)
 Frame = +2

Query: 191  QLPATSVSLSHRILGQSGCSLPFGSSLGASYLDSQKLLNSEKEYHAPK-----STFSGSE 355
            Q PAT    S+  L   G S  F SS   S L SQKLL+S++   +       S FSGSE
Sbjct: 313  QWPATDYG-SYTSLINRGSSFSFSSSFDTSLLGSQKLLDSDRASRSSSLLQSASAFSGSE 371

Query: 356  RDDLPLVGTSRVPPHSTGYISKIRSYDWEPSVPFRPSFFITSMNVSSPGNLYDPLCDSIE 535
             + L L            + +KI S DWEPSVPFRPSFFIT   +SS G+ YDPL DS  
Sbjct: 372  PESLSLASVPGDQLRHAEHKTKISSNDWEPSVPFRPSFFITPEMISSAGSKYDPLRDSFV 431

Query: 536  IPNIGDGSLKASLLIQGSSIQASSQVRTYGDSAVVGKHISDLNDEKSSVSSHENEPY--- 706
            +PN+GD S K S    G+SI  +SQ   YGDS       ++ N +KS++SSH+ +P+   
Sbjct: 432  LPNVGDKSFKFSFFSLGASISNTSQQPIYGDSLSNRNFGTEFNGDKSTISSHD-KPHGSL 490

Query: 707  --KNSVLREKDCLATETETTSGTNYQNGKVGVGQHTFSVE----DIMKREKKRTEHDARH 868
              KN     KD   T T  T G    +G+ G      S      D + R   + + DAR 
Sbjct: 491  SDKNCSTPGKDSFTTAT-VTGGAGTADGENGSALKEESASGIGYDKVNRVTNKIDRDARP 549

Query: 869  HGEGSRLKKKREGKD-KNINEMEVDFQMDSSVNKETKVLRNFRAALVDLVKELLKPSW 1039
              +GSR KK  +    +  N+MEVD ++     KE+KVLR+FR+AL+D VK+LLKP+W
Sbjct: 550  QTDGSRHKKDLKADSVRQNNDMEVDQKIGGDTQKESKVLRHFRSALIDFVKDLLKPTW 607


>ref|XP_004155642.1| PREDICTED: uncharacterized protein LOC101231580 [Cucumis sativus]
          Length = 738

 Score =  125 bits (313), Expect = 2e-26
 Identities = 101/312 (32%), Positives = 148/312 (47%), Gaps = 17/312 (5%)
 Frame = +2

Query: 155  VLSHSPNSSGVSQLPATSVSLSHRILGQSGCSLPFGSSLGASYLDSQKLLNSEKEYHAP- 331
            VL  S NS+    LP  ++ LS R    +    P  SS  AS L++ K+   ++E+H   
Sbjct: 375  VLRTSLNSNPT--LPRDAI-LSSRFTTSNASLFPLTSSSSASLLNAHKMSIIDREHHVST 431

Query: 332  -------KSTFSGSERDDLPLVGTSRVPPHSTGYISKIRSYDWEPSVPFRPSFFITSMNV 490
                    S FS S  D+      + V  + + Y  K  S DWEPSVPFRPSFFI S+  
Sbjct: 432  PASSLMRSSPFSASGSDN----SFTHVSKNPSEYKMKCSSDDWEPSVPFRPSFFIPSITT 487

Query: 491  SSPGNLYDPLCDSIEIPNIGDGSLKASLLIQG--SSIQASSQVRTYGDSAVVGKHISDLN 664
            +S    YDP  DS+E+P I   S   +L  QG   +   S+  R  G+  V G    + N
Sbjct: 488  ASQ---YDPFLDSMEVPRIVGCSYNVTLDRQGHEEASPLSTLQRASGNFVVPGSSKPEFN 544

Query: 665  DEKSSVSSHENEPYKNSV---LREKDCLATETETTS--GTNYQNGKVGVGQHTFSV--ED 823
            D+ SS+SSH     KN     L+ KD L  E E     G + +  +     H      +D
Sbjct: 545  DDTSSLSSHNKAADKNGKVGHLQGKDPLLLEPEIRGSFGLDGRFSRTREDDHKGLTCEKD 604

Query: 824  IMKREKKRTEHDARHHGEGSRLKKKREGKDKNINEMEVDFQMDSSVNKETKVLRNFRAAL 1003
            + K++K     + +        K      D+ + +M+    M+ +  KE+K  R+FR+AL
Sbjct: 605  VTKKKKMGIGGELKLPNISLHEKDSEADSDRQLGDMDGKHLMEGNAPKESKATRHFRSAL 664

Query: 1004 VDLVKELLKPSW 1039
            ++LVKE+LKP W
Sbjct: 665  IELVKEILKPKW 676


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