BLASTX nr result

ID: Glycyrrhiza24_contig00019806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019806
         (935 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553006.1| PREDICTED: 50S ribosomal protein L19, chloro...   321   1e-85
ref|XP_003530531.1| PREDICTED: 50S ribosomal protein L19, chloro...   320   4e-85
gb|AFK40991.1| unknown [Lotus japonicus]                              244   2e-62
ref|XP_004139446.1| PREDICTED: 50S ribosomal protein L19, chloro...   240   4e-61
ref|XP_002519953.1| 50S ribosomal protein L19, putative [Ricinus...   238   2e-60

>ref|XP_003553006.1| PREDICTED: 50S ribosomal protein L19, chloroplastic-like [Glycine
           max]
          Length = 236

 Score =  321 bits (823), Expect = 1e-85
 Identities = 170/217 (78%), Positives = 184/217 (84%), Gaps = 6/217 (2%)
 Frame = +3

Query: 90  PEFQSPSSVRPLSFPNLTSHLSPIA------TGAFPRVESGNGLASMLGSSRLASFQQAS 251
           PEFQ+P+  R  S PN ++ +SPIA      T  F + ESGNGLAS+L SS +  +Q A 
Sbjct: 20  PEFQAPTPFRLFSVPNFSTRVSPIAITKLPGTEVFSQFESGNGLASVLRSSGMGLYQPAG 79

Query: 252 ALVPRCRIRFMSTEENSVDSSSQDGSIPEPEVPPRIKFKRLDKTARHIMQILDKEAVEEV 431
            LVP    RFMSTE  SVDSSSQD S+ EPEVPPRIKFKRLDKTARHIMQILDKEAVEEV
Sbjct: 80  GLVPPFASRFMSTEATSVDSSSQDSSMLEPEVPPRIKFKRLDKTARHIMQILDKEAVEEV 139

Query: 432 KGQREIPDIKPGYIVQLKVEVPENKRRVSIIKGIVIARRNAGLNSTFRIRRQVAGVGIES 611
           +GQREIPDIKPGYIVQLKVEVPENKRRVSIIKGIVIARRNAGLN+TFRIRRQVAGVGIES
Sbjct: 140 RGQREIPDIKPGYIVQLKVEVPENKRRVSIIKGIVIARRNAGLNTTFRIRRQVAGVGIES 199

Query: 612 LFPLYSPNIKEIKVLDKKKVRRAKLYYLREKMNALKN 722
           LFPLYSPNIKEIKVLDKK+VRRAKLYYLRE+MN LKN
Sbjct: 200 LFPLYSPNIKEIKVLDKKRVRRAKLYYLRERMNPLKN 236


>ref|XP_003530531.1| PREDICTED: 50S ribosomal protein L19, chloroplastic-like [Glycine
           max]
          Length = 231

 Score =  320 bits (819), Expect = 4e-85
 Identities = 168/213 (78%), Positives = 183/213 (85%), Gaps = 1/213 (0%)
 Frame = +3

Query: 87  PPEFQSPSSVRPLSFPNLTSHLSPIA-TGAFPRVESGNGLASMLGSSRLASFQQASALVP 263
           PPEFQ+    +P S PN ++ + P+A T  F + ESGNGLAS+L SS L  +QQA  +VP
Sbjct: 19  PPEFQASIPSQPFSVPNFSTGVYPVAITKLFSQFESGNGLASVLRSSGLGLYQQAGGVVP 78

Query: 264 RCRIRFMSTEENSVDSSSQDGSIPEPEVPPRIKFKRLDKTARHIMQILDKEAVEEVKGQR 443
               RFMSTE  SVDSSSQD S  EPEVPPRIKFKRLDKTARHIMQILDKEAVE+V+GQR
Sbjct: 79  PFASRFMSTEATSVDSSSQDSSTLEPEVPPRIKFKRLDKTARHIMQILDKEAVEDVRGQR 138

Query: 444 EIPDIKPGYIVQLKVEVPENKRRVSIIKGIVIARRNAGLNSTFRIRRQVAGVGIESLFPL 623
           EIPDIKPGYIVQLKVEVPENKRRVSIIKGIVIARRNAGLN+TFRIRRQVAGVGIESLFPL
Sbjct: 139 EIPDIKPGYIVQLKVEVPENKRRVSIIKGIVIARRNAGLNTTFRIRRQVAGVGIESLFPL 198

Query: 624 YSPNIKEIKVLDKKKVRRAKLYYLREKMNALKN 722
           YSPNIKEIKVLDKK+VRRAKLYYLRE+MN LKN
Sbjct: 199 YSPNIKEIKVLDKKRVRRAKLYYLRERMNPLKN 231


>gb|AFK40991.1| unknown [Lotus japonicus]
          Length = 163

 Score =  244 bits (623), Expect = 2e-62
 Identities = 128/161 (79%), Positives = 140/161 (86%)
 Frame = +3

Query: 237 FQQASALVPRCRIRFMSTEENSVDSSSQDGSIPEPEVPPRIKFKRLDKTARHIMQILDKE 416
           F+  + + P    RFMST+ NSVDSS Q  S  EPEVP RIKFKRLDKT RHI+QILDKE
Sbjct: 4   FRCVATIAPSFCSRFMSTKINSVDSS-QGSSAREPEVPVRIKFKRLDKTGRHIIQILDKE 62

Query: 417 AVEEVKGQREIPDIKPGYIVQLKVEVPENKRRVSIIKGIVIARRNAGLNSTFRIRRQVAG 596
           AVEEVK QR++PDIKPGY VQLKVEVPENKRRVSIIKGIVIARRNAGLNSTFRIRR VAG
Sbjct: 63  AVEEVKAQRQMPDIKPGYTVQLKVEVPENKRRVSIIKGIVIARRNAGLNSTFRIRRMVAG 122

Query: 597 VGIESLFPLYSPNIKEIKVLDKKKVRRAKLYYLREKMNALK 719
           VGIE+LFPLYSPNIKEIKV+DKKKVRRAKLYYLR+++N  K
Sbjct: 123 VGIENLFPLYSPNIKEIKVIDKKKVRRAKLYYLRDRLNFKK 163


>ref|XP_004139446.1| PREDICTED: 50S ribosomal protein L19, chloroplastic-like [Cucumis
           sativus]
          Length = 269

 Score =  240 bits (612), Expect = 4e-61
 Identities = 133/208 (63%), Positives = 154/208 (74%)
 Frame = +3

Query: 96  FQSPSSVRPLSFPNLTSHLSPIATGAFPRVESGNGLASMLGSSRLASFQQASALVPRCRI 275
           F    +  P +F N++S +  +     P  +  +   S   SSR   FQ A    P    
Sbjct: 67  FSRSGNQYPEAFKNMSSQMEFV-----PLRKHASSTFSAFQSSRPHFFQLAETAAPFSSR 121

Query: 276 RFMSTEENSVDSSSQDGSIPEPEVPPRIKFKRLDKTARHIMQILDKEAVEEVKGQREIPD 455
              +T  +S++S+ Q     +  +PPRIKFKRLDKT+RHIMQILDKEAVEEVK +REIPD
Sbjct: 122 GIATT--SSMESALQGSPAVDSVIPPRIKFKRLDKTSRHIMQILDKEAVEEVKARREIPD 179

Query: 456 IKPGYIVQLKVEVPENKRRVSIIKGIVIARRNAGLNSTFRIRRQVAGVGIESLFPLYSPN 635
           IKPGYIVQLKVEVPENKRR+S +KGIVIARRNAGLNSTFRIRR VAGVGIESLFPLYSPN
Sbjct: 180 IKPGYIVQLKVEVPENKRRISTLKGIVIARRNAGLNSTFRIRRVVAGVGIESLFPLYSPN 239

Query: 636 IKEIKVLDKKKVRRAKLYYLREKMNALK 719
           IKEIKVL+KKKVRRAKLYYLR+KMNALK
Sbjct: 240 IKEIKVLEKKKVRRAKLYYLRDKMNALK 267


>ref|XP_002519953.1| 50S ribosomal protein L19, putative [Ricinus communis]
           gi|223540999|gb|EEF42557.1| 50S ribosomal protein L19,
           putative [Ricinus communis]
          Length = 248

 Score =  238 bits (606), Expect = 2e-60
 Identities = 129/182 (70%), Positives = 146/182 (80%), Gaps = 4/182 (2%)
 Frame = +3

Query: 186 ESGNGLASMLGSS----RLASFQQASALVPRCRIRFMSTEENSVDSSSQDGSIPEPEVPP 353
           +SG G+ ++  SS    R +S       +P    R M+T  NSV+S++   S       P
Sbjct: 65  KSGTGMDTLTLSSGCNCRSSSLCFRKDAIPPLPRRNMTTTGNSVESATTVPSASTVNAAP 124

Query: 354 RIKFKRLDKTARHIMQILDKEAVEEVKGQREIPDIKPGYIVQLKVEVPENKRRVSIIKGI 533
            IKFKRLDKTARHIMQILDKEAV+EVK QREIPDI+PGYIVQLKVEVPENKRRVSI+KGI
Sbjct: 125 NIKFKRLDKTARHIMQILDKEAVQEVKTQREIPDIRPGYIVQLKVEVPENKRRVSIVKGI 184

Query: 534 VIARRNAGLNSTFRIRRQVAGVGIESLFPLYSPNIKEIKVLDKKKVRRAKLYYLREKMNA 713
           VIARRNAGLN+TFR+RR VAGVG+ESLFPLYSPNIKEIKVLDKKKVRRAKLYYLR+KMNA
Sbjct: 185 VIARRNAGLNTTFRLRRLVAGVGVESLFPLYSPNIKEIKVLDKKKVRRAKLYYLRDKMNA 244

Query: 714 LK 719
           LK
Sbjct: 245 LK 246


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