BLASTX nr result

ID: Glycyrrhiza24_contig00019805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019805
         (1112 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-l...   384   e-104
ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-l...   367   2e-99
ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat...   320   3e-85
emb|CBI29360.3| unnamed protein product [Vitis vinifera]              320   3e-85
ref|XP_002307526.1| predicted protein [Populus trichocarpa] gi|2...   298   2e-78

>ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-like isoform 1 [Glycine
            max]
          Length = 652

 Score =  384 bits (986), Expect = e-104
 Identities = 194/255 (76%), Positives = 204/255 (80%)
 Frame = +3

Query: 3    LYVAVAQRKEERKARLQAHFAQIQTPSAIAPLPAGIPGYHPGAPRLAPQQLYFGQGTXXX 182
            LYVAVAQRKEERKA LQA FAQI+ P  +APLPAGIP YHPGAPRLAPQQLY+GQGT   
Sbjct: 388  LYVAVAQRKEERKAHLQAQFAQIRAPGGMAPLPAGIPLYHPGAPRLAPQQLYYGQGTPGF 447

Query: 183  XXXXXXXXXXXXXXMPGMRPGVAPNFIMPYHLQRQGQPGQRMGVRRNGNIQQVQQNQMLH 362
                          +PGMRPGVAPNFIMPYHLQRQGQ GQR GVRRNGN QQVQQNQMLH
Sbjct: 448  MPPQPAGFSFQQQILPGMRPGVAPNFIMPYHLQRQGQLGQRTGVRRNGNFQQVQQNQMLH 507

Query: 363  RNSNQGFRYMANNRNGMDPSVVPQGLVGQMMPMAFDGSGVTAAPIDNQHPGXXXXXXXXX 542
            RNSNQGFRYM N RNGMDPS+VP GL+G MMPM FDGSGVTAAP DNQ PG         
Sbjct: 508  RNSNQGFRYMPNGRNGMDPSLVPHGLMGPMMPMPFDGSGVTAAPNDNQRPGALSTTLASA 567

Query: 543  XXXXXPENQRMMLGEHLYPLVDRLTPNQHTAKVTGMLLEMDQSEVIHLIESPEDLKIKVS 722
                 PENQRMMLGEHLYPLV+RL PNQ+TAKVTGMLLEMDQSEVI+LIESPEDLK KVS
Sbjct: 568  LASATPENQRMMLGEHLYPLVERLAPNQYTAKVTGMLLEMDQSEVINLIESPEDLKTKVS 627

Query: 723  EALQVLREAASGSEV 767
            EA+QVL E ASGSEV
Sbjct: 628  EAMQVLHEVASGSEV 642


>ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-like isoform 2 [Glycine
            max]
          Length = 642

 Score =  367 bits (943), Expect = 2e-99
 Identities = 187/248 (75%), Positives = 198/248 (79%), Gaps = 1/248 (0%)
 Frame = +3

Query: 3    LYVAVAQRKEERKARLQAHFAQIQTPSAIAPLPAGIPGYHPGAPRLAPQQLYFGQGTXXX 182
            LYVAVAQRKEERKA LQA FAQI+ P  +APLPAGIP YHPGAPRLAPQQLY+GQGT   
Sbjct: 388  LYVAVAQRKEERKAHLQAQFAQIRAPGGMAPLPAGIPLYHPGAPRLAPQQLYYGQGTPGF 447

Query: 183  XXXXXXXXXXXXXXMPGMRPGVAPNFIMPYHLQRQGQPGQRMGVRRNGNIQQVQQNQ-ML 359
                          +PGMRPGVAPNFIMPYHLQRQGQ GQR GVRRNGN QQVQQNQ ML
Sbjct: 448  MPPQPAGFSFQQQILPGMRPGVAPNFIMPYHLQRQGQLGQRTGVRRNGNFQQVQQNQQML 507

Query: 360  HRNSNQGFRYMANNRNGMDPSVVPQGLVGQMMPMAFDGSGVTAAPIDNQHPGXXXXXXXX 539
            HRNSNQGFRYM N RNGMDPS+VP GL+G MMPM FDGSGVTAAP DNQ PG        
Sbjct: 508  HRNSNQGFRYMPNGRNGMDPSLVPHGLMGPMMPMPFDGSGVTAAPNDNQRPGALSTTLAS 567

Query: 540  XXXXXXPENQRMMLGEHLYPLVDRLTPNQHTAKVTGMLLEMDQSEVIHLIESPEDLKIKV 719
                  PENQRMMLGEHLYPLV+RL PNQ+TAKVTGMLLEMDQSEVI+LIESPEDLK KV
Sbjct: 568  ALASATPENQRMMLGEHLYPLVERLAPNQYTAKVTGMLLEMDQSEVINLIESPEDLKTKV 627

Query: 720  SEALQVLR 743
            SEA+QVL+
Sbjct: 628  SEAMQVLQ 635


>ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein 3
            [Vitis vinifera]
          Length = 1093

 Score =  320 bits (821), Expect = 3e-85
 Identities = 164/261 (62%), Positives = 196/261 (75%), Gaps = 3/261 (1%)
 Frame = +3

Query: 3    LYVAVAQRKEERKARLQAHFAQIQTPSAIAPLPAGIPGYHPGAPRLAPQQLYFGQGTXXX 182
            LYVAVAQRKEERKARLQA FAQI++P A+ PL +G+PG+H GAPRLAPQQLYFGQGT   
Sbjct: 826  LYVAVAQRKEERKARLQAQFAQIRSPGAMTPLQSGVPGFHSGAPRLAPQQLYFGQGTPGL 885

Query: 183  XXXXXXXXXXXXXXMPGMRPGVAPNFIMPYHLQRQGQPGQRMGVRRNGNIQQVQQNQ--M 356
                          MPGMRPGVAPNFIMPY LQRQGQPGQRMGVRR GN QQ+Q  Q  +
Sbjct: 886  IPTQPAGYGFQQQLMPGMRPGVAPNFIMPYQLQRQGQPGQRMGVRRGGNSQQMQHQQQPL 945

Query: 357  LHRNSNQGFRYMANNRNGMDPSVVPQGLVGQMMPMAFDGSGVTAAPIDNQHPG-XXXXXX 533
            LHRNSNQ +RYMAN RNG+DPS+VPQGL+G +MP+ FD SG+  +P+D Q  G       
Sbjct: 946  LHRNSNQSYRYMANGRNGVDPSMVPQGLMGPVMPLPFDVSGMPVSPMDIQRTGPVPMSTL 1005

Query: 534  XXXXXXXXPENQRMMLGEHLYPLVDRLTPNQHTAKVTGMLLEMDQSEVIHLIESPEDLKI 713
                    P+NQR+MLGE L+PLV+R+   +   KVTGMLLEMDQ+EV+HLIESP+ LK 
Sbjct: 1006 ASALASTTPDNQRLMLGEQLFPLVERI-ERETAGKVTGMLLEMDQTEVLHLIESPDALKN 1064

Query: 714  KVSEALQVLREAASGSEVGDQ 776
            KV+EA+ VLR ++SG++VGDQ
Sbjct: 1065 KVAEAMDVLRASSSGNDVGDQ 1085


>emb|CBI29360.3| unnamed protein product [Vitis vinifera]
          Length = 633

 Score =  320 bits (821), Expect = 3e-85
 Identities = 164/261 (62%), Positives = 196/261 (75%), Gaps = 3/261 (1%)
 Frame = +3

Query: 3    LYVAVAQRKEERKARLQAHFAQIQTPSAIAPLPAGIPGYHPGAPRLAPQQLYFGQGTXXX 182
            LYVAVAQRKEERKARLQA FAQI++P A+ PL +G+PG+H GAPRLAPQQLYFGQGT   
Sbjct: 366  LYVAVAQRKEERKARLQAQFAQIRSPGAMTPLQSGVPGFHSGAPRLAPQQLYFGQGTPGL 425

Query: 183  XXXXXXXXXXXXXXMPGMRPGVAPNFIMPYHLQRQGQPGQRMGVRRNGNIQQVQQNQ--M 356
                          MPGMRPGVAPNFIMPY LQRQGQPGQRMGVRR GN QQ+Q  Q  +
Sbjct: 426  IPTQPAGYGFQQQLMPGMRPGVAPNFIMPYQLQRQGQPGQRMGVRRGGNSQQMQHQQQPL 485

Query: 357  LHRNSNQGFRYMANNRNGMDPSVVPQGLVGQMMPMAFDGSGVTAAPIDNQHPG-XXXXXX 533
            LHRNSNQ +RYMAN RNG+DPS+VPQGL+G +MP+ FD SG+  +P+D Q  G       
Sbjct: 486  LHRNSNQSYRYMANGRNGVDPSMVPQGLMGPVMPLPFDVSGMPVSPMDIQRTGPVPMSTL 545

Query: 534  XXXXXXXXPENQRMMLGEHLYPLVDRLTPNQHTAKVTGMLLEMDQSEVIHLIESPEDLKI 713
                    P+NQR+MLGE L+PLV+R+   +   KVTGMLLEMDQ+EV+HLIESP+ LK 
Sbjct: 546  ASALASTTPDNQRLMLGEQLFPLVERI-ERETAGKVTGMLLEMDQTEVLHLIESPDALKN 604

Query: 714  KVSEALQVLREAASGSEVGDQ 776
            KV+EA+ VLR ++SG++VGDQ
Sbjct: 605  KVAEAMDVLRASSSGNDVGDQ 625


>ref|XP_002307526.1| predicted protein [Populus trichocarpa] gi|222856975|gb|EEE94522.1|
            predicted protein [Populus trichocarpa]
          Length = 649

 Score =  298 bits (762), Expect = 2e-78
 Identities = 155/260 (59%), Positives = 185/260 (71%), Gaps = 2/260 (0%)
 Frame = +3

Query: 3    LYVAVAQRKEERKARLQAHFAQIQTPSAIAPLPAGIPGYHPGAPRLAPQQLYFGQGTXXX 182
            LYVAVAQR+EERKARLQAHF QIQ P  ++P+P+G+PGYHPGAPRLAPQQL+FGQGT   
Sbjct: 385  LYVAVAQRREERKARLQAHFTQIQAPG-LSPMPSGLPGYHPGAPRLAPQQLFFGQGTAGM 443

Query: 183  XXXXXXXXXXXXXXMPGMRPGVAPNFIMPYHLQRQGQPGQRMGVRRNGNIQQV-QQNQML 359
                          +PGMR GV PNF+MPY +QRQGQ GQRMG+RR GN QQ+ QQ Q+L
Sbjct: 444  MPPQPAGYGFQQQLLPGMRAGVGPNFVMPYQMQRQGQQGQRMGIRRGGNHQQIQQQQQLL 503

Query: 360  HRNSNQGFRYMANNRNGMDPSVVPQGLVGQMMPMAFDGSGVTAAPIDNQHPG-XXXXXXX 536
            HRN+NQG RYM N RNG+D S  PQG VG ++P  F+ SG+   P D Q           
Sbjct: 504  HRNTNQGLRYMGNARNGIDSSAAPQGFVGPVVPFPFEASGMPVTPSDAQRTAPVPISALT 563

Query: 537  XXXXXXXPENQRMMLGEHLYPLVDRLTPNQHTAKVTGMLLEMDQSEVIHLIESPEDLKIK 716
                   PE + +MLGE LYPLV+RL P+Q  AKVTGMLLEMDQ+EV+HLIESP+ LK K
Sbjct: 564  TALASATPEKRMVMLGEQLYPLVERLEPDQ-VAKVTGMLLEMDQTEVLHLIESPDALKKK 622

Query: 717  VSEALQVLREAASGSEVGDQ 776
            V+EA+QVL+E  + S VGDQ
Sbjct: 623  VAEAMQVLQEVGA-SSVGDQ 641


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