BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019795
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548483.1| PREDICTED: pentatricopeptide repeat-containi...   228   4e-58
ref|XP_003553320.1| PREDICTED: pentatricopeptide repeat-containi...   218   3e-55
ref|XP_003624556.1| Pentatricopeptide repeat-containing protein ...   210   1e-52
ref|XP_002512787.1| pentatricopeptide repeat-containing protein,...   160   1e-37
ref|XP_002301563.1| predicted protein [Populus trichocarpa] gi|2...   155   3e-36

>ref|XP_003548483.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
           chloroplastic-like [Glycine max]
          Length = 483

 Score =  228 bits (581), Expect = 4e-58
 Identities = 111/145 (76%), Positives = 122/145 (84%)
 Frame = +1

Query: 22  PYLKTPKTRFNSEVALVFLHKCSNFNHLKQVHGRIIRFGLNYDQLLIRKLLQLSSSYGKL 201
           PYL TP+TRF SE ALV L KCSNF  LKQVHG+IIRFGL YDQLL+RKL+QLSSSYGK+
Sbjct: 14  PYLGTPRTRFGSEEALVLLQKCSNFKQLKQVHGKIIRFGLTYDQLLMRKLIQLSSSYGKM 73

Query: 202 NHATLLFDQLNAPDTFTWNVMIRAYNTSGSPEKALLLFKDMMCQGFVPDKFTYPFVINAC 381
            +ATL+FDQLNAPD FTWNVMIRA+   GSP+ ALLLFK M+CQGF PDKFTYPFVINAC
Sbjct: 74  KYATLVFDQLNAPDVFTWNVMIRAFTIGGSPKMALLLFKAMLCQGFAPDKFTYPFVINAC 133

Query: 382 IASSALYFGRAAHGLAIKMGFFWSD 456
           +ASSAL  G  AH LAIKMG FW D
Sbjct: 134 MASSALDLGIVAHALAIKMG-FWGD 157



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
 Frame = +1

Query: 46  RFNSEVALVFLHKCSNFNHLK---QVHGRIIRFGLNYDQLLIRKLLQLSSSYGKLNHATL 216
           R N    +  +  C+    LK   +VH   ++ G   +  L   L+ + S  G L+ A  
Sbjct: 253 RPNEYTLVSLVRACTEMGSLKLGRRVHDFALKNGFELEPFLGTALIDMYSKCGYLDDART 312

Query: 217 LFDQLNAPDTFTWNVMIRAYNTSGSPEKALLLFKDMMCQGFVPDKFTYPFVINACI 384
           +FD +      TWN MI +    G  ++AL LF +M     VPD  T+  V++AC+
Sbjct: 313 VFDMMQVRTLATWNTMITSLGVHGYRDEALSLFDEMEKANEVPDAITFVGVLSACV 368


>ref|XP_003553320.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
           chloroplastic-like [Glycine max]
          Length = 474

 Score =  218 bits (556), Expect = 3e-55
 Identities = 106/145 (73%), Positives = 119/145 (82%)
 Frame = +1

Query: 22  PYLKTPKTRFNSEVALVFLHKCSNFNHLKQVHGRIIRFGLNYDQLLIRKLLQLSSSYGKL 201
           PYL+TP+TRF SE ALV L KCSNF  LKQVHG+IIR+GL YDQLL+RKL+QLS SYGK+
Sbjct: 13  PYLETPRTRFGSEEALVLLKKCSNFKQLKQVHGKIIRYGLTYDQLLVRKLIQLSPSYGKM 72

Query: 202 NHATLLFDQLNAPDTFTWNVMIRAYNTSGSPEKALLLFKDMMCQGFVPDKFTYPFVINAC 381
            +ATL+FDQLNAPD FTWNVMIRAY   GSP+ A LLFK M+ QGF PDKFTYP VINAC
Sbjct: 73  KYATLVFDQLNAPDVFTWNVMIRAYTIGGSPKMAFLLFKAMLYQGFAPDKFTYPCVINAC 132

Query: 382 IASSALYFGRAAHGLAIKMGFFWSD 456
           +A +AL  GR AH LAIKMG FW D
Sbjct: 133 MAYNALDVGRVAHALAIKMG-FWGD 156



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
 Frame = +1

Query: 28  LKTPKTRFNSEVALVFLHKCSNFNHLK---QVHGRIIRFGLNYDQLLIRKLLQLSSSYGK 198
           ++    R N    +  +  C+    LK   +VH   ++ G   +  L   L+ + S  G 
Sbjct: 245 MQADNVRPNEYTLVSLVRACTEMGSLKLGRRVHDFALKNGFELEPFLGTALIDMYSKCGN 304

Query: 199 LNHATLLFDQLNAPDTFTWNVMIRAYNTSGSPEKALLLFKDMMCQGFVPDKFTYPFVINA 378
           L+ A  +FD +      TWN MI +    G  ++AL +F++M     VPD  T+  V++A
Sbjct: 305 LDDARTVFDMMQMRTLATWNTMITSLGVHGYRDEALSIFEEMEKANEVPDAITFVGVLSA 364

Query: 379 CI 384
           C+
Sbjct: 365 CV 366


>ref|XP_003624556.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499571|gb|AES80774.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 476

 Score =  210 bits (534), Expect = 1e-52
 Identities = 101/146 (69%), Positives = 120/146 (82%), Gaps = 1/146 (0%)
 Frame = +1

Query: 22  PYLKTPKT-RFNSEVALVFLHKCSNFNHLKQVHGRIIRFGLNYDQLLIRKLLQLSSSYGK 198
           P++  P+  RF SE A +FL  C+NF  LKQ+H RIIRF L +DQLLIRKL Q+SSSYGK
Sbjct: 8   PHVNIPQELRFGSEEARLFLQNCNNFKQLKQIHARIIRFRLTHDQLLIRKLCQISSSYGK 67

Query: 199 LNHATLLFDQLNAPDTFTWNVMIRAYNTSGSPEKALLLFKDMMCQGFVPDKFTYPFVINA 378
           +++A+L+FDQLN PD FTWNVMIRAYNTSG P+K++ LFKDM+C GF+PDKFTYPFVINA
Sbjct: 68  IDYASLVFDQLNDPDIFTWNVMIRAYNTSGLPQKSIFLFKDMICCGFLPDKFTYPFVINA 127

Query: 379 CIASSALYFGRAAHGLAIKMGFFWSD 456
           CIAS  + FGR  HGLAIKMG FWSD
Sbjct: 128 CIASGVIDFGRLTHGLAIKMG-FWSD 152



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 6/106 (5%)
 Frame = +1

Query: 145 YDQLLIRKLLQLSS------SYGKLNHATLLFDQLNAPDTFTWNVMIRAYNTSGSPEKAL 306
           +D++ +R ++  ++      + GKL+ A  +F+++ + +  +W  MI  Y  + +P KA 
Sbjct: 177 FDKMRVRNVVSWTTVIAGLVACGKLDTAREVFERIPSKNVVSWTAMINGYVKNDNPIKAF 236

Query: 307 LLFKDMMCQGFVPDKFTYPFVINACIASSALYFGRAAHGLAIKMGF 444
            LF+ M+     P++FT   +I AC    +L  GR  H  A+K GF
Sbjct: 237 DLFERMLIDNVRPNEFTLVSLIKACTDLGSLKLGRRMHDFALKNGF 282



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
 Frame = +1

Query: 55  SEVALVFLHK-CSNFNHLK---QVHGRIIRFGLNYDQLLIRKLLQLSSSYGKLNHATLLF 222
           +E  LV L K C++   LK   ++H   ++ G      L   L+ + S  G L+ A  +F
Sbjct: 250 NEFTLVSLIKACTDLGSLKLGRRMHDFALKNGFELGPFLGTALVDMYSKCGSLDAAVKVF 309

Query: 223 DQLNAPDTFTWNVMIRAYNTSGSPEKALLLFKDMMCQGFVPDKFTYPFVINACIASSALY 402
             +   +  TWN M+ ++   G   + L LFK+M   G VPD  T+  V++AC+  + L 
Sbjct: 310 GLMEVRNLATWNTMLTSFGVHGFGNEVLDLFKEMEKAGVVPDAITFVGVLSACVQINDLE 369

Query: 403 FGR 411
            G+
Sbjct: 370 LGQ 372


>ref|XP_002512787.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547798|gb|EEF49290.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 480

 Score =  160 bits (405), Expect = 1e-37
 Identities = 80/139 (57%), Positives = 102/139 (73%)
 Frame = +1

Query: 40  KTRFNSEVALVFLHKCSNFNHLKQVHGRIIRFGLNYDQLLIRKLLQLSSSYGKLNHATLL 219
           K +F S+ AL  L K SNF H+K V  +IIR  L+ DQLL+RKLL+L  SY K+++ATL+
Sbjct: 27  KPKFGSQEALNLLQKGSNFTHVKLVQAKIIRNNLSDDQLLVRKLLRLCFSYQKVDYATLI 86

Query: 220 FDQLNAPDTFTWNVMIRAYNTSGSPEKALLLFKDMMCQGFVPDKFTYPFVINACIASSAL 399
           FDQ+  P TFTWN MIRAYN +G+ ++ALLL+  M+C+GF PDKFT+PFVI AC+  SAL
Sbjct: 87  FDQIQNPHTFTWNFMIRAYNYNGNSQQALLLYNLMICEGFSPDKFTFPFVIKACLDHSAL 146

Query: 400 YFGRAAHGLAIKMGFFWSD 456
             G+  HG AIK G FW D
Sbjct: 147 DKGKEVHGFAIKTG-FWKD 164


>ref|XP_002301563.1| predicted protein [Populus trichocarpa] gi|222843289|gb|EEE80836.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  155 bits (392), Expect = 3e-36
 Identities = 74/133 (55%), Positives = 97/133 (72%)
 Frame = +1

Query: 46  RFNSEVALVFLHKCSNFNHLKQVHGRIIRFGLNYDQLLIRKLLQLSSSYGKLNHATLLFD 225
           +F S  AL+ L  C++FNHLK VHG+IIR  L+ +QLL+RKL+ L SSYG+L++A LLF 
Sbjct: 37  KFGSAEALLLLQNCTSFNHLKLVHGKIIRNALSANQLLVRKLIHLCSSYGRLDYAALLFH 96

Query: 226 QLNAPDTFTWNVMIRAYNTSGSPEKALLLFKDMMCQGFVPDKFTYPFVINACIASSALYF 405
           Q+  P TFTWN +IR Y   G   KALLL+  M+ +GF PDKFT+PFV+ AC+AS ++  
Sbjct: 97  QVQEPHTFTWNFLIRTYTIHGYSMKALLLYNLMIRRGFPPDKFTFPFVVKACLASGSIRK 156

Query: 406 GRAAHGLAIKMGF 444
           G+  HGLAIK GF
Sbjct: 157 GKEVHGLAIKTGF 169