BLASTX nr result

ID: Glycyrrhiza24_contig00019760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019760
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38384.1| unknown [Medicago truncatula]                          153   1e-35
ref|XP_003609369.1| hypothetical protein MTR_4g114900 [Medicago ...   153   1e-35
gb|ACJ85266.1| unknown [Medicago truncatula]                          153   2e-35
gb|ACU17650.1| unknown [Glycine max]                                  118   4e-28
ref|XP_002308072.1| predicted protein [Populus trichocarpa] gi|2...    65   8e-09

>gb|AFK38384.1| unknown [Medicago truncatula]
          Length = 406

 Score =  153 bits (387), Expect = 1e-35
 Identities = 76/101 (75%), Positives = 82/101 (81%), Gaps = 4/101 (3%)
 Frame = -1

Query: 519 CSSSKGNPTYEIDDVGLGLS----KYSHLSLQKNRELCLYPREAGYGTIDPNFRNNVEGE 352
           CSS K +   EID VGLGLS    KYSH+ LQ+NREL LYPR AG+GTID + R NVEGE
Sbjct: 306 CSSGKSSSASEIDGVGLGLSQEGNKYSHMPLQRNRELFLYPRGAGHGTIDSSSRGNVEGE 365

Query: 351 DQNLEATLRKRKAPLGNNEDDGQFCRHLGVPSNRFTGRPGS 229
           DQNLEA  RKRKAPL NNE+DGQFCRHLGVPSNRFTGRPGS
Sbjct: 366 DQNLEAMFRKRKAPLANNEEDGQFCRHLGVPSNRFTGRPGS 406


>ref|XP_003609369.1| hypothetical protein MTR_4g114900 [Medicago truncatula]
           gi|355510424|gb|AES91566.1| hypothetical protein
           MTR_4g114900 [Medicago truncatula]
          Length = 406

 Score =  153 bits (387), Expect = 1e-35
 Identities = 76/101 (75%), Positives = 82/101 (81%), Gaps = 4/101 (3%)
 Frame = -1

Query: 519 CSSSKGNPTYEIDDVGLGLS----KYSHLSLQKNRELCLYPREAGYGTIDPNFRNNVEGE 352
           CSS K +   EID VGLGLS    KYSH+ LQ+NREL LYPR AG+GTID + R NVEGE
Sbjct: 306 CSSGKSSSASEIDGVGLGLSQEGNKYSHMPLQRNRELFLYPRGAGHGTIDSSSRGNVEGE 365

Query: 351 DQNLEATLRKRKAPLGNNEDDGQFCRHLGVPSNRFTGRPGS 229
           DQNLEA  RKRKAPL NNE+DGQFCRHLGVPSNRFTGRPGS
Sbjct: 366 DQNLEAMFRKRKAPLANNEEDGQFCRHLGVPSNRFTGRPGS 406


>gb|ACJ85266.1| unknown [Medicago truncatula]
          Length = 406

 Score =  153 bits (386), Expect = 2e-35
 Identities = 75/101 (74%), Positives = 82/101 (81%), Gaps = 4/101 (3%)
 Frame = -1

Query: 519 CSSSKGNPTYEIDDVGLGLS----KYSHLSLQKNRELCLYPREAGYGTIDPNFRNNVEGE 352
           CSS K +   E+D VGLGLS    KYSH+ LQ+NREL LYPR AG+GTID + R NVEGE
Sbjct: 306 CSSGKSSSASEVDGVGLGLSQEGNKYSHMPLQRNRELFLYPRGAGHGTIDSSSRGNVEGE 365

Query: 351 DQNLEATLRKRKAPLGNNEDDGQFCRHLGVPSNRFTGRPGS 229
           DQNLEA  RKRKAPL NNE+DGQFCRHLGVPSNRFTGRPGS
Sbjct: 366 DQNLEAMFRKRKAPLANNEEDGQFCRHLGVPSNRFTGRPGS 406


>gb|ACU17650.1| unknown [Glycine max]
          Length = 399

 Score =  118 bits (296), Expect(2) = 4e-28
 Identities = 60/85 (70%), Positives = 68/85 (80%), Gaps = 5/85 (5%)
 Frame = -1

Query: 519 CSSSKGNPTYEIDDVGLGLS----KYSHLSLQKNRELCLYPREAGYGTIDPNF-RNNVEG 355
           CSSSK +  YE+DDVGLG+S    ++SHLSLQK RE C YPRE GYGTI+    + NVEG
Sbjct: 302 CSSSKSSLAYEVDDVGLGVSPGSSRFSHLSLQKYREFCFYPRETGYGTIESTSGKCNVEG 361

Query: 354 EDQNLEATLRKRKAPLGNNEDDGQF 280
           EDQNLEATLRKRKAPLGNN +DGQF
Sbjct: 362 EDQNLEATLRKRKAPLGNNVEDGQF 386



 Score = 31.2 bits (69), Expect(2) = 4e-28
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = -3

Query: 280 LPASRGPIQSFYW 242
           LP SRGPIQSFYW
Sbjct: 387 LPESRGPIQSFYW 399


>ref|XP_002308072.1| predicted protein [Populus trichocarpa] gi|222854048|gb|EEE91595.1|
           predicted protein [Populus trichocarpa]
          Length = 263

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 37/78 (47%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
 Frame = -1

Query: 459 KYSHLSLQKNRELCLYPREAGYGTIDPNFRNNV----EGEDQNLEATLRKRKAPLGNNED 292
           K+S  S Q+N+E C +P   G  T DP+   +V    EG+DQNLE T+RKRKAP  +N +
Sbjct: 187 KFSVFSQQRNKEFCFFP---GTSTRDPSGSCSVKWVSEGDDQNLETTIRKRKAPFRDNAE 243

Query: 291 DGQFCRHLGVPSNRFTGR 238
           DG FC      SN F GR
Sbjct: 244 DGHFCWQ----SNMFIGR 257


Top