BLASTX nr result

ID: Glycyrrhiza24_contig00019754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019754
         (1035 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556072.1| PREDICTED: mediator of RNA polymerase II tra...   273   7e-71
ref|NP_001235064.1| uncharacterized protein LOC100527879 [Glycin...   271   2e-70
gb|AFK35607.1| unknown [Lotus japonicus]                              267   3e-69
gb|AFK36513.1| unknown [Medicago truncatula]                          266   5e-69
ref|XP_002279047.1| PREDICTED: mediator of RNA polymerase II tra...   250   3e-64

>ref|XP_003556072.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           31-like [Glycine max]
          Length = 206

 Score =  273 bits (697), Expect = 7e-71
 Identities = 125/131 (95%), Positives = 129/131 (98%)
 Frame = +2

Query: 38  MASKTESENPTDTTPSSPKNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDE 217
           MASK ESEN TDT+PSSPKN+YKDPDDG+QRFLLELEFVQCLANPTYIHYLAQNRYFEDE
Sbjct: 1   MASKIESENSTDTSPSSPKNIYKDPDDGQQRFLLELEFVQCLANPTYIHYLAQNRYFEDE 60

Query: 218 AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPSNKELAHRQQFYFWK 397
           AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHP+NKELAHRQQFYFWK
Sbjct: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPTNKELAHRQQFYFWK 120

Query: 398 NYRNNRLKHIL 430
           NYRNNRLKHIL
Sbjct: 121 NYRNNRLKHIL 131


>ref|NP_001235064.1| uncharacterized protein LOC100527879 [Glycine max]
           gi|255633448|gb|ACU17082.1| unknown [Glycine max]
          Length = 205

 Score =  271 bits (693), Expect = 2e-70
 Identities = 124/131 (94%), Positives = 128/131 (97%)
 Frame = +2

Query: 38  MASKTESENPTDTTPSSPKNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDE 217
           MASK ESEN TDT+PSSPKN+YKDPDDG+QRFLLELEFVQCLANPTYIHYLAQNRYFEDE
Sbjct: 1   MASKIESENSTDTSPSSPKNIYKDPDDGQQRFLLELEFVQCLANPTYIHYLAQNRYFEDE 60

Query: 218 AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPSNKELAHRQQFYFWK 397
           AFIGYLKYLQYWQRPEYIKFIMYPHC YFLELLQNANFRNAMAHP+NKELAHRQQFYFWK
Sbjct: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCFYFLELLQNANFRNAMAHPTNKELAHRQQFYFWK 120

Query: 398 NYRNNRLKHIL 430
           NYRNNRLKHIL
Sbjct: 121 NYRNNRLKHIL 131


>gb|AFK35607.1| unknown [Lotus japonicus]
          Length = 206

 Score =  267 bits (683), Expect = 3e-69
 Identities = 122/131 (93%), Positives = 126/131 (96%)
 Frame = +2

Query: 38  MASKTESENPTDTTPSSPKNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDE 217
           M SKT+ EN TDTTPS PKN+YKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDE
Sbjct: 1   MTSKTDGENSTDTTPSLPKNIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDE 60

Query: 218 AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPSNKELAHRQQFYFWK 397
           AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLE LQNANFR+AMAHP+NKELAHRQQFYFWK
Sbjct: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLERLQNANFRSAMAHPNNKELAHRQQFYFWK 120

Query: 398 NYRNNRLKHIL 430
           NYRNNRLKHIL
Sbjct: 121 NYRNNRLKHIL 131


>gb|AFK36513.1| unknown [Medicago truncatula]
          Length = 204

 Score =  266 bits (681), Expect = 5e-69
 Identities = 122/131 (93%), Positives = 126/131 (96%)
 Frame = +2

Query: 38  MASKTESENPTDTTPSSPKNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDE 217
           MASKTES +P DT PS PK++YKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDE
Sbjct: 1   MASKTESGSPRDTPPSPPKSIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDE 60

Query: 218 AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPSNKELAHRQQFYFWK 397
           AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHP+NKEL HRQQFYFWK
Sbjct: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPTNKELTHRQQFYFWK 120

Query: 398 NYRNNRLKHIL 430
           NYRNNRLKHIL
Sbjct: 121 NYRNNRLKHIL 131


>ref|XP_002279047.1| PREDICTED: mediator of RNA polymerase II transcription subunit 31
           [Vitis vinifera] gi|297737389|emb|CBI26590.3| unnamed
           protein product [Vitis vinifera]
          Length = 198

 Score =  250 bits (639), Expect = 3e-64
 Identities = 116/131 (88%), Positives = 124/131 (94%)
 Frame = +2

Query: 38  MASKTESENPTDTTPSSPKNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDE 217
           M S  ES++  DT P+SPKNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDE
Sbjct: 1   MDSGKESDSAADT-PTSPKNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDE 59

Query: 218 AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPSNKELAHRQQFYFWK 397
           AFIGYLKYLQYWQ+PEYIKFIMYPHCL+FLELLQNANFRNAMAHP +KELAHRQQF++WK
Sbjct: 60  AFIGYLKYLQYWQQPEYIKFIMYPHCLFFLELLQNANFRNAMAHPGSKELAHRQQFFYWK 119

Query: 398 NYRNNRLKHIL 430
           NYRNNRLKHIL
Sbjct: 120 NYRNNRLKHIL 130


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