BLASTX nr result

ID: Glycyrrhiza24_contig00019741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019741
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529692.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   196   1e-48
ref|XP_003633412.1| PREDICTED: ZF-HD homeobox protein At4g24660 ...   196   1e-48
ref|XP_002525870.1| transcription factor, putative [Ricinus comm...   180   1e-43
ref|XP_003550152.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   179   2e-43
ref|XP_002331077.1| predicted protein [Populus trichocarpa] gi|2...   152   4e-35

>ref|XP_003529692.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Glycine max]
          Length = 283

 Score =  196 bits (499), Expect = 1e-48
 Identities = 110/149 (73%), Positives = 116/149 (77%), Gaps = 6/149 (4%)
 Frame = +2

Query: 86  EDH----YKKVAVQVRYRECLKNHAAAMGGNATDGCGEFMPSGEEGTIEALNCSACHCHR 253
           EDH    YKKV   VRYRECLKNHAAAMGGNATDGCGEFMPSGEEGTIEALNCSACHCHR
Sbjct: 56  EDHGLGSYKKV---VRYRECLKNHAAAMGGNATDGCGEFMPSGEEGTIEALNCSACHCHR 112

Query: 254 NFHRKEVEGDSSSEYHQYASHFNRLQGRKFILGPPHKNLLPPEALGYHPTAATGNILPSR 433
           NFHRKEVEG+ S +YH    H N +  R+ ILG PHKNLLPPEALGY PTAA       R
Sbjct: 113 NFHRKEVEGEPSCDYH----HLN-INRRRHILG-PHKNLLPPEALGY-PTAA-------R 158

Query: 434 TVPPHHMIMPYNY-NIG-PLPSESDEQEE 514
           +VPPH MIMPYN   IG  LPSESDEQE+
Sbjct: 159 SVPPHQMIMPYNIGGIGHHLPSESDEQED 187


>ref|XP_003633412.1| PREDICTED: ZF-HD homeobox protein At4g24660 [Vitis vinifera]
          Length = 281

 Score =  196 bits (499), Expect = 1e-48
 Identities = 108/166 (65%), Positives = 121/166 (72%), Gaps = 2/166 (1%)
 Frame = +2

Query: 23  PQNPSNGSSMXXXXXXXXXVLEDH--YKKVAVQVRYRECLKNHAAAMGGNATDGCGEFMP 196
           PQ PSNG  +          LEDH  YKK    VRYRECLKNHAAAMGGNATDGCGEFMP
Sbjct: 50  PQIPSNGPPIPS-------TLEDHVPYKKA---VRYRECLKNHAAAMGGNATDGCGEFMP 99

Query: 197 SGEEGTIEALNCSACHCHRNFHRKEVEGDSSSEYHQYASHFNRLQGRKFILGPPHKNLLP 376
            GEEGT+EALNCSACHCHRNFHRKEVEG+ SS    ++ H NR+ GRK ILG  HKN++ 
Sbjct: 100 GGEEGTLEALNCSACHCHRNFHRKEVEGERSSCDCFHSPHLNRV-GRKVILG-HHKNIIG 157

Query: 377 PEALGYHPTAATGNILPSRTVPPHHMIMPYNYNIGPLPSESDEQEE 514
           PEALGY     TG ++ SR  PPH MIM  +YN+G LPSESDEQE+
Sbjct: 158 PEALGY----PTGTLISSRPPPPHQMIM--SYNMGSLPSESDEQED 197


>ref|XP_002525870.1| transcription factor, putative [Ricinus communis]
           gi|223534875|gb|EEF36564.1| transcription factor,
           putative [Ricinus communis]
          Length = 311

 Score =  180 bits (456), Expect = 1e-43
 Identities = 99/152 (65%), Positives = 116/152 (76%), Gaps = 8/152 (5%)
 Frame = +2

Query: 83  LEDHYKKVAV------QVRYRECLKNHAAAMGGNATDGCGEFMPSGEEGTIEALNCSACH 244
           L+DH+   +        V+Y+ECLKNHAAAMGGNATDGCGEFMPSGEEG+IEAL CSAC+
Sbjct: 70  LDDHHHVTSTTSTFKKMVKYKECLKNHAAAMGGNATDGCGEFMPSGEEGSIEALTCSACN 129

Query: 245 CHRNFHRKEVEGDSSSEYHQYASHFNRLQGRKFILGPPHKNLLPPEALGYHPTAATGNIL 424
           CHRNFHRKE++G+ ++    Y  HFNR+ GRK ILG  HKN+L PEALGY PT  TG ++
Sbjct: 130 CHRNFHRKEIDGE-TNPCDYYPPHFNRV-GRKVILG-HHKNILAPEALGY-PT-GTGTLV 184

Query: 425 PSR-TVPPHH-MIMPYNYNIGPLPSESDEQEE 514
           PSR TV PHH MIM YN   G LPSESDEQE+
Sbjct: 185 PSRATVAPHHQMIMSYNMG-GSLPSESDEQED 215


>ref|XP_003550152.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Glycine max]
          Length = 286

 Score =  179 bits (455), Expect = 2e-43
 Identities = 101/162 (62%), Positives = 109/162 (67%), Gaps = 1/162 (0%)
 Frame = +2

Query: 32  PSNGSSMXXXXXXXXXVLEDHYKKVAVQVRYRECLKNHAAAMGGNATDGCGEFMPSGEEG 211
           PSNG              ED YKKV   VRYRECLKNHAAAMGGNATDGCGEFMPSG+EG
Sbjct: 49  PSNGIPTTMQQQEEEEEEEDRYKKV---VRYRECLKNHAAAMGGNATDGCGEFMPSGKEG 105

Query: 212 TIEALNCSACHCHRNFHRKEVEGDSSSEYHQYASHFNRLQGRKFILGPPHKNLLPPEALG 391
           +IEALNCSACHCHRNFHRKEVEG+          H   +  R+ ILGP       PEALG
Sbjct: 106 SIEALNCSACHCHRNFHRKEVEGE--------PQHHLNINRRRLILGP------HPEALG 151

Query: 392 YHPTAATGNILPSRTVPPHHMIMPYNYNIG-PLPSESDEQEE 514
           Y PTAA      +R+VPPH MIMPYN  IG  LPSESDEQE+
Sbjct: 152 Y-PTAA------ARSVPPHQMIMPYNIGIGHHLPSESDEQED 186


>ref|XP_002331077.1| predicted protein [Populus trichocarpa] gi|222872805|gb|EEF09936.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score =  152 bits (383), Expect = 4e-35
 Identities = 79/132 (59%), Positives = 90/132 (68%)
 Frame = +2

Query: 119 RYRECLKNHAAAMGGNATDGCGEFMPSGEEGTIEALNCSACHCHRNFHRKEVEGDSSSEY 298
           RYRECLKNHAAAMGGNATDGCGEFMPSGEEG+IEAL CSAC+CHRNFHR+E+EG+ +S  
Sbjct: 1   RYRECLKNHAAAMGGNATDGCGEFMPSGEEGSIEALTCSACNCHRNFHRREIEGEHTSS- 59

Query: 299 HQYASHFNRLQGRKFILGPPHKNLLPPEALGYHPTAATGNILPSRTVPPHHMIMPYNYNI 478
                                     PEALGY PT ATG ++P R   PHH  M  +YN+
Sbjct: 60  --------------------------PEALGY-PT-ATGTLVPPRAAAPHHQ-MIMSYNM 90

Query: 479 GPLPSESDEQEE 514
           G LPSESDEQE+
Sbjct: 91  GSLPSESDEQED 102


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