BLASTX nr result

ID: Glycyrrhiza24_contig00019706 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019706
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554878.1| PREDICTED: nuclear distribution protein PAC1...   127   1e-27
ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Gly...   121   7e-26
ref|XP_002324039.1| f-box family protein [Populus trichocarpa] g...   110   2e-22
ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c...   107   1e-21
emb|CBI22162.3| unnamed protein product [Vitis vinifera]              107   1e-21

>ref|XP_003554878.1| PREDICTED: nuclear distribution protein PAC1-like [Glycine max]
          Length = 452

 Score =  127 bits (318), Expect = 1e-27
 Identities = 62/82 (75%), Positives = 68/82 (82%)
 Frame = -2

Query: 246 DIRRNQDFLKPEPIAELNGHSGPVTKLHVDEYKIVTGGPAGAYVNVWEVGTGEKTNSLLC 67
           D+RRNQ+ LKPEPIAEL+GH G VT LH+D YKIVTGGP  AYVNVWEV TG +TNSLLC
Sbjct: 326 DVRRNQESLKPEPIAELDGHCGQVTLLHMDPYKIVTGGPDNAYVNVWEVDTGVQTNSLLC 385

Query: 66  CLTEIDGGISGCDAIAVDGCRI 1
            LT  DG  SGCDA+AVDGCRI
Sbjct: 386 SLT--DGAGSGCDAMAVDGCRI 405


>ref|XP_003543846.1| PREDICTED: pleiotropic regulator 1-like [Glycine max]
          Length = 501

 Score =  121 bits (303), Expect = 7e-26
 Identities = 59/82 (71%), Positives = 66/82 (80%)
 Frame = -2

Query: 246 DIRRNQDFLKPEPIAELNGHSGPVTKLHVDEYKIVTGGPAGAYVNVWEVGTGEKTNSLLC 67
           D+RRNQ+ LKPEPIAEL+GH G VT LH+D YKIVTGGP  AYVNVWEV TG +TNSLLC
Sbjct: 376 DVRRNQESLKPEPIAELDGHCGQVTLLHMDPYKIVTGGPDNAYVNVWEVDTGVQTNSLLC 435

Query: 66  CLTEIDGGISGCDAIAVDGCRI 1
             T+  G  SGCDA+ VDGCRI
Sbjct: 436 SSTDDAG--SGCDAMTVDGCRI 455


>ref|XP_002324039.1| f-box family protein [Populus trichocarpa]
           gi|222867041|gb|EEF04172.1| f-box family protein
           [Populus trichocarpa]
          Length = 498

 Score =  110 bits (274), Expect = 2e-22
 Identities = 51/84 (60%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
 Frame = -2

Query: 246 DIRRNQDFLKPEPIAELNGHSGPVTKLHVDEYKIVTGGPAGAYVNVWEVGTGEKTNSLLC 67
           DIR NQ+ LKPEP+AEL+GH+GPVT LH+D YKIVTGGP  +Y+NVWE  TG +TNS +C
Sbjct: 367 DIRINQETLKPEPVAELDGHTGPVTLLHMDPYKIVTGGPEDSYINVWETDTGAQTNSFIC 426

Query: 66  CLTEIDGGIS--GCDAIAVDGCRI 1
           C ++     S  GC A+AV+G RI
Sbjct: 427 CPSDAASSSSGMGCSAMAVNGTRI 450


>ref|XP_002277161.2| PREDICTED: ribosome assembly protein C18.05c [Vitis vinifera]
          Length = 494

 Score =  107 bits (266), Expect = 1e-21
 Identities = 48/82 (58%), Positives = 61/82 (74%)
 Frame = -2

Query: 246 DIRRNQDFLKPEPIAELNGHSGPVTKLHVDEYKIVTGGPAGAYVNVWEVGTGEKTNSLLC 67
           DIR++Q+ LKPEP+ E++GH+GPVT LH+D YKIVTGGP   +VNVWE+ TG +TN+L C
Sbjct: 363 DIRKSQETLKPEPVIEVDGHTGPVTLLHMDPYKIVTGGPEDDHVNVWELDTGTQTNTLAC 422

Query: 66  CLTEIDGGISGCDAIAVDGCRI 1
              E      GC A+A DGCRI
Sbjct: 423 SSDEGPNSNPGCSAMAADGCRI 444


>emb|CBI22162.3| unnamed protein product [Vitis vinifera]
          Length = 491

 Score =  107 bits (266), Expect = 1e-21
 Identities = 48/82 (58%), Positives = 61/82 (74%)
 Frame = -2

Query: 246 DIRRNQDFLKPEPIAELNGHSGPVTKLHVDEYKIVTGGPAGAYVNVWEVGTGEKTNSLLC 67
           DIR++Q+ LKPEP+ E++GH+GPVT LH+D YKIVTGGP   +VNVWE+ TG +TN+L C
Sbjct: 360 DIRKSQETLKPEPVIEVDGHTGPVTLLHMDPYKIVTGGPEDDHVNVWELDTGTQTNTLAC 419

Query: 66  CLTEIDGGISGCDAIAVDGCRI 1
              E      GC A+A DGCRI
Sbjct: 420 SSDEGPNSNPGCSAMAADGCRI 441


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