BLASTX nr result

ID: Glycyrrhiza24_contig00019637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019637
         (1142 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34761.1| unknown [Lotus japonicus]                              385   e-104
ref|XP_003552362.1| PREDICTED: 50S ribosomal protein L22, chloro...   367   3e-99
gb|AFK34292.1| unknown [Medicago truncatula]                          360   3e-97
ref|XP_003589828.1| 50S ribosomal protein L22 [Medicago truncatu...   360   3e-97
ref|XP_003533624.1| PREDICTED: 50S ribosomal protein L22, chloro...   327   2e-89

>gb|AFK34761.1| unknown [Lotus japonicus]
          Length = 273

 Score =  385 bits (989), Expect = e-104
 Identities = 195/259 (75%), Positives = 214/259 (82%)
 Frame = +1

Query: 199 MVQWQRHFFPILRHIHKRVDHVNHSATSLVIXXXXXXXXXXXXXXTWTTPLPSNSRPFFH 378
           MVQWQRH FPILRHIHK VDHV HSA  L I               WTT  PS S P +H
Sbjct: 1   MVQWQRHIFPILRHIHKGVDHVYHSAPKLSISHLSSSFPQGQFQGAWTTTSPSISMPMYH 60

Query: 379 CFQLQRISSSTQLLKNSSEETPVSSPLAQVSILGSSKAEDQNQKVVTKPEKVQAVLKKIK 558
           CFQ Q ISSST LL NS EETPVSSPLA +S+LGSSK EDQNQK V+KPE VQAVLK IK
Sbjct: 61  CFQHQGISSSTWLLANSPEETPVSSPLAPLSLLGSSKGEDQNQKAVSKPENVQAVLKGIK 120

Query: 559 QSPKKVNLVAALVRGMLVKDALMQLQVTVKRAAKTVYQVIHSARANASHNHGLDPERLIV 738
           QSPKKVNLV ALVRGMLVKDAL+QLQ+TVKRAAKTVYQVIHSARANASHN GLD +RLI+
Sbjct: 121 QSPKKVNLVVALVRGMLVKDALLQLQLTVKRAAKTVYQVIHSARANASHNRGLDSDRLII 180

Query: 739 DEAFVGKGFFKKRMAYHAKHRSGIIHRPECRLTVVVREITPEEEAKIARLRVHNYRKLTK 918
            EA+VGKGF+KKR++ H K R GI+HRPECRLTVVVREITPEEEAKIARL+VHN++KL+K
Sbjct: 181 AEAYVGKGFYKKRISIHGKCRHGIMHRPECRLTVVVREITPEEEAKIARLKVHNFKKLSK 240

Query: 919 REKRLVPHQLIETNPVWGR 975
           RE+RLVPH+LIET PVWGR
Sbjct: 241 RERRLVPHKLIETTPVWGR 259


>ref|XP_003552362.1| PREDICTED: 50S ribosomal protein L22, chloroplastic-like [Glycine
           max]
          Length = 277

 Score =  367 bits (942), Expect = 3e-99
 Identities = 197/263 (74%), Positives = 213/263 (80%), Gaps = 4/263 (1%)
 Frame = +1

Query: 199 MVQWQRHFFPILRHIHKRV--DHVNHSATSLVIXXXXXXXXXXXXXX-TWTTP-LPSNSR 366
           MVQW RH FP LRHIHKRV      HSA SLVI               TWTT  LP  SR
Sbjct: 1   MVQWHRHVFPFLRHIHKRVLEPQATHSAPSLVISRLASSLSQGQLGRRTWTTTTLPCFSR 60

Query: 367 PFFHCFQLQRISSSTQLLKNSSEETPVSSPLAQVSILGSSKAEDQNQKVVTKPEKVQAVL 546
           P F  FQ Q ISSS QLL NSSEETPV SPLA VS+L SSK EDQ QKVVTKPEKVQA+L
Sbjct: 61  PVFLTFQHQGISSSAQLLANSSEETPVLSPLAPVSLLSSSKGEDQKQKVVTKPEKVQAIL 120

Query: 547 KKIKQSPKKVNLVAALVRGMLVKDALMQLQVTVKRAAKTVYQVIHSARANASHNHGLDPE 726
           K IKQSPKKVNLVAALVRGMLVKDALMQL++T+KRAAKTVYQVIHSARANASHNHGLDPE
Sbjct: 121 KAIKQSPKKVNLVAALVRGMLVKDALMQLELTIKRAAKTVYQVIHSARANASHNHGLDPE 180

Query: 727 RLIVDEAFVGKGFFKKRMAYHAKHRSGIIHRPECRLTVVVREITPEEEAKIARLRVHNYR 906
           RLIV EAFVGKGF+KKR+  HAK +S +  RPECRLTVVVREIT EEEA+IARLRVHN++
Sbjct: 181 RLIVAEAFVGKGFYKKRLWPHAKGKSSLRVRPECRLTVVVREITAEEEAEIARLRVHNFK 240

Query: 907 KLTKREKRLVPHQLIETNPVWGR 975
           +LTKR+KRLVPHQLIE+NP+WGR
Sbjct: 241 RLTKRQKRLVPHQLIESNPIWGR 263


>gb|AFK34292.1| unknown [Medicago truncatula]
          Length = 285

 Score =  360 bits (925), Expect = 3e-97
 Identities = 185/259 (71%), Positives = 211/259 (81%)
 Frame = +1

Query: 199 MVQWQRHFFPILRHIHKRVDHVNHSATSLVIXXXXXXXXXXXXXXTWTTPLPSNSRPFFH 378
           MVQWQRH FPILR IHK ++  NHSAT+L +               W+  +PS SRPF H
Sbjct: 1   MVQWQRHIFPILRRIHKGLEPANHSATNLALYHSRSSLSQGQLQRQWSIGVPSISRPFDH 60

Query: 379 CFQLQRISSSTQLLKNSSEETPVSSPLAQVSILGSSKAEDQNQKVVTKPEKVQAVLKKIK 558
            FQ Q ISSSTQLLKNSSEE P+SSPL  VS  GSS+ ++QN+K     +KVQA+LKKIK
Sbjct: 61  RFQYQGISSSTQLLKNSSEEAPISSPLVPVSSFGSSQGQEQNKKA----DKVQAILKKIK 116

Query: 559 QSPKKVNLVAALVRGMLVKDALMQLQVTVKRAAKTVYQVIHSARANASHNHGLDPERLIV 738
           QSPKKVNLVAALVRGMLVKDAL+QLQV VKRA+KTVYQVIHSARANASHNHGL+ +RLIV
Sbjct: 117 QSPKKVNLVAALVRGMLVKDALLQLQVLVKRASKTVYQVIHSARANASHNHGLNADRLIV 176

Query: 739 DEAFVGKGFFKKRMAYHAKHRSGIIHRPECRLTVVVREITPEEEAKIARLRVHNYRKLTK 918
            EAFVGKG FKKR++ H K RSGI+HRPECRLTVV+REITPEEEA+IARL+VHN++KLTK
Sbjct: 177 AEAFVGKGDFKKRVSIHGKGRSGIMHRPECRLTVVLREITPEEEAQIARLKVHNFKKLTK 236

Query: 919 REKRLVPHQLIETNPVWGR 975
           +E RLVPHQLIET PVWGR
Sbjct: 237 KEGRLVPHQLIETTPVWGR 255


>ref|XP_003589828.1| 50S ribosomal protein L22 [Medicago truncatula]
           gi|355478876|gb|AES60079.1| 50S ribosomal protein L22
           [Medicago truncatula]
          Length = 326

 Score =  360 bits (925), Expect = 3e-97
 Identities = 185/259 (71%), Positives = 211/259 (81%)
 Frame = +1

Query: 199 MVQWQRHFFPILRHIHKRVDHVNHSATSLVIXXXXXXXXXXXXXXTWTTPLPSNSRPFFH 378
           MVQWQRH FPILR IHK ++  NHSAT+L +               W+  +PS SRPF H
Sbjct: 1   MVQWQRHIFPILRRIHKGLEPANHSATNLALYHSRSSLSQGQLQRQWSIGVPSISRPFDH 60

Query: 379 CFQLQRISSSTQLLKNSSEETPVSSPLAQVSILGSSKAEDQNQKVVTKPEKVQAVLKKIK 558
            FQ Q ISSSTQLLKNSSEE P+SSPL  VS  GSS+ ++QN+K     +KVQA+LKKIK
Sbjct: 61  RFQYQGISSSTQLLKNSSEEAPISSPLVPVSSFGSSQGQEQNKKA----DKVQAILKKIK 116

Query: 559 QSPKKVNLVAALVRGMLVKDALMQLQVTVKRAAKTVYQVIHSARANASHNHGLDPERLIV 738
           QSPKKVNLVAALVRGMLVKDAL+QLQV VKRA+KTVYQVIHSARANASHNHGL+ +RLIV
Sbjct: 117 QSPKKVNLVAALVRGMLVKDALLQLQVLVKRASKTVYQVIHSARANASHNHGLNADRLIV 176

Query: 739 DEAFVGKGFFKKRMAYHAKHRSGIIHRPECRLTVVVREITPEEEAKIARLRVHNYRKLTK 918
            EAFVGKG FKKR++ H K RSGI+HRPECRLTVV+REITPEEEA+IARL+VHN++KLTK
Sbjct: 177 AEAFVGKGDFKKRVSIHGKGRSGIMHRPECRLTVVLREITPEEEAQIARLKVHNFKKLTK 236

Query: 919 REKRLVPHQLIETNPVWGR 975
           +E RLVPHQLIET PVWGR
Sbjct: 237 KEGRLVPHQLIETTPVWGR 255


>ref|XP_003533624.1| PREDICTED: 50S ribosomal protein L22, chloroplastic-like [Glycine
           max]
          Length = 292

 Score =  327 bits (838), Expect(2) = 2e-89
 Identities = 178/241 (73%), Positives = 193/241 (80%), Gaps = 2/241 (0%)
 Frame = +1

Query: 259 HVNHSATSLVIXXXXXXXXXXXXXX-TWTTP-LPSNSRPFFHCFQLQRISSSTQLLKNSS 432
           H  HSA SLVI               TWTT  LP  SRP F   Q Q ISSS  LL NSS
Sbjct: 38  HATHSAPSLVISRLASSLSQVQLGRRTWTTTTLPCFSRPIFLGSQHQGISSSANLLANSS 97

Query: 433 EETPVSSPLAQVSILGSSKAEDQNQKVVTKPEKVQAVLKKIKQSPKKVNLVAALVRGMLV 612
           EETPV SPL  VS+LGSSK EDQ QKVVTK EKVQAVLK IKQSPKKVNLVAALVRGMLV
Sbjct: 98  EETPVLSPLVPVSLLGSSKGEDQKQKVVTKQEKVQAVLKAIKQSPKKVNLVAALVRGMLV 157

Query: 613 KDALMQLQVTVKRAAKTVYQVIHSARANASHNHGLDPERLIVDEAFVGKGFFKKRMAYHA 792
           KDALMQL++T+KRAAKTVYQVIHSARANASHNHGLDPERLIV EAFVGKGF+KKR+  HA
Sbjct: 158 KDALMQLELTIKRAAKTVYQVIHSARANASHNHGLDPERLIVAEAFVGKGFYKKRLWPHA 217

Query: 793 KHRSGIIHRPECRLTVVVREITPEEEAKIARLRVHNYRKLTKREKRLVPHQLIETNPVWG 972
           K +S +  RPECRLTVVVREIT EEEA+IARLRVHN++K TKR++RLVPHQLI +NP+WG
Sbjct: 218 KGKSSLRVRPECRLTVVVREITAEEEAEIARLRVHNFKKRTKRQQRLVPHQLIVSNPIWG 277

Query: 973 R 975
           R
Sbjct: 278 R 278



 Score = 29.6 bits (65), Expect(2) = 2e-89
 Identities = 16/21 (76%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
 Frame = +3

Query: 201 GAMAETFFPNSSSHSQA-SGP 260
           GA+AET FP SS HSQA SGP
Sbjct: 17  GAVAETRFPLSSPHSQASSGP 37


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