BLASTX nr result

ID: Glycyrrhiza24_contig00019636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019636
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591130.1| DNA (cytosine-5)-methyltransferase 3B [Medic...   119   3e-25
dbj|BAB02100.1| unnamed protein product [Arabidopsis thaliana]        117   1e-24
gb|AAF79806.1|AC020646_29 T32E20.13 [Arabidopsis thaliana]            115   3e-24
gb|AAD48963.1|AF147263_5 contains similarity to transposases [Ar...   115   4e-24
pir||H85073 probable transposon protein [imported] - Arabidopsis...   113   2e-23

>ref|XP_003591130.1| DNA (cytosine-5)-methyltransferase 3B [Medicago truncatula]
           gi|355480178|gb|AES61381.1| DNA
           (cytosine-5)-methyltransferase 3B [Medicago truncatula]
          Length = 722

 Score =  119 bits (298), Expect = 3e-25
 Identities = 60/117 (51%), Positives = 78/117 (66%)
 Frame = -3

Query: 363 HILNLIVQEVLKAAGDALHKIRESVKYVRASEGRLRDFQRCIEEVHLSDVGGGFLRLDVA 184
           HILNLIVQ+ LK   DALHKIR+SV YVR  + R   F  C+  V +  +     + D  
Sbjct: 487 HILNLIVQDRLKVVSDALHKIRQSVAYVR-EQSRTLQFFECVRNVGMLVIL--IQQSDCV 543

Query: 183 TKWNATYMMLESAIKYRRAFINLSYNDKHYKICPSNEEWERAEKMCVFLAPFYTITN 13
           T+WN+T+ ML+SAI YRRAF +LS  + ++K CP+++EW RAE MC  L PFY ITN
Sbjct: 544 TRWNSTFRMLQSAINYRRAFYSLSLRNSNFKCCPTSDEWRRAETMCDILKPFYNITN 600


>dbj|BAB02100.1| unnamed protein product [Arabidopsis thaliana]
          Length = 463

 Score =  117 bits (292), Expect = 1e-24
 Identities = 61/122 (50%), Positives = 79/122 (64%)
 Frame = -3

Query: 366 AHILNLIVQEVLKAAGDALHKIRESVKYVRASEGRLRDFQRCIEEVHLSDVGGGFLRLDV 187
           AH+LNLIVQE L  A + L  IRESV++V+ASE R   F  C+E V +    G  L LDV
Sbjct: 302 AHVLNLIVQEGLSIATELLENIRESVRFVKASESRKDAFAACVESVGIRSGAG--LSLDV 359

Query: 186 ATKWNATYMMLESAIKYRRAFINLSYNDKHYKICPSNEEWERAEKMCVFLAPFYTITN*I 7
            T+WN+TY ML  A+K+R+AF +L   D++YK   S  EW+R E++C  L PF TIT   
Sbjct: 360 PTRWNSTYDMLARALKFRKAFASLKECDRNYKSLTSENEWDRGERICDLLKPFSTITTYF 419

Query: 6   SG 1
           SG
Sbjct: 420 SG 421


>gb|AAF79806.1|AC020646_29 T32E20.13 [Arabidopsis thaliana]
          Length = 1335

 Score =  115 bits (289), Expect = 3e-24
 Identities = 63/121 (52%), Positives = 77/121 (63%)
 Frame = -3

Query: 366 AHILNLIVQEVLKAAGDALHKIRESVKYVRASEGRLRDFQRCIEEVHLSDVGGGFLRLDV 187
           AHILNLIVQ+ LK    AL KIR+SVK V+AS+ R   FQ+C+E        G  L LDV
Sbjct: 249 AHILNLIVQDGLKIISGALTKIRDSVKCVKASKARGLAFQQCVEGDQ-----GVVLSLDV 303

Query: 186 ATKWNATYMMLESAIKYRRAFINLSYNDKHYKICPSNEEWERAEKMCVFLAPFYTITN*I 7
            T+WN+ ++MLE A+ Y+R F  L   DK YK CP NEEWER  K+C  L  FY IT  +
Sbjct: 304 QTRWNSMFLMLEKALNYKRVFNRLRVVDKCYKTCPLNEEWERGTKICDILRSFYKITTLM 363

Query: 6   S 4
           S
Sbjct: 364 S 364


>gb|AAD48963.1|AF147263_5 contains similarity to transposases [Arabidopsis thaliana]
           gi|7267311|emb|CAB81093.1| AT4g05510 [Arabidopsis
           thaliana]
          Length = 604

 Score =  115 bits (288), Expect = 4e-24
 Identities = 61/122 (50%), Positives = 76/122 (62%)
 Frame = -3

Query: 366 AHILNLIVQEVLKAAGDALHKIRESVKYVRASEGRLRDFQRCIEEVHLSDVGGGFLRLDV 187
           AH+LN IVQ  L    DAL KIRE+VKYV+ S  R      C+E       G   L LDV
Sbjct: 274 AHVLNRIVQNGLDVISDALSKIRETVKYVKGSTSRRLALAECVE-----GKGEVLLSLDV 328

Query: 186 ATKWNATYMMLESAIKYRRAFINLSYNDKHYKICPSNEEWERAEKMCVFLAPFYTITN*I 7
            T+WN+TY+ML  A+KY+RA       DK+YK CPS+EEW+RA+ +   L PFY ITN +
Sbjct: 329 QTRWNSTYLMLHKALKYQRALNRFKIVDKNYKNCPSSEEWKRAKTIHEILMPFYKITNLM 388

Query: 6   SG 1
           SG
Sbjct: 389 SG 390


>pir||H85073 probable transposon protein [imported] - Arabidopsis thaliana
           gi|5032279|gb|AAD38227.1|AF147264_10 may be a pseudogene
           [Arabidopsis thaliana] gi|7267351|emb|CAB81124.1|
           putative transposon protein [Arabidopsis thaliana]
          Length = 483

 Score =  113 bits (282), Expect = 2e-23
 Identities = 64/122 (52%), Positives = 81/122 (66%), Gaps = 1/122 (0%)
 Frame = -3

Query: 363 HILNLIVQEVLKAAGDALHKIRESVKYVRASEGRLRDFQRCIEEVHLSDVGGGFLRLDVA 184
           HILN+IVQ  LK  GD L KIRES+KYV+ SE R   F +C+E V ++   G  L LDVA
Sbjct: 164 HILNIIVQIGLKGIGDTLEKIRESIKYVKGSEHREILFAKCMENVGINLKAG--LLLDVA 221

Query: 183 TKWNATYMMLESAIKYRRAFINLSYND-KHYKICPSNEEWERAEKMCVFLAPFYTITN*I 7
            +WN+T+ ML+ A+KYR AF NL   D K+YK  P++ EW R ++M  FL  F  ITN I
Sbjct: 222 NRWNSTFKMLDRALKYRAAFGNLKVIDAKNYKFHPTDAEWHRLQQMSDFLESFDQITNLI 281

Query: 6   SG 1
           SG
Sbjct: 282 SG 283


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