BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019511
         (618 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003618343.1| Chloroplastic group IIA intron splicing faci...   124   2e-26
ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron sp...   110   2e-22
ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplasti...   110   2e-22
emb|CBI34982.3| unnamed protein product [Vitis vinifera]              106   3e-21
ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron sp...   106   3e-21

>ref|XP_003618343.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
           truncatula] gi|355493358|gb|AES74561.1| Chloroplastic
           group IIA intron splicing facilitator CRS1 [Medicago
           truncatula]
          Length = 1096

 Score =  124 bits (310), Expect = 2e-26
 Identities = 74/140 (52%), Positives = 83/140 (59%), Gaps = 5/140 (3%)
 Frame = +3

Query: 213 PTKFVIRCSSSETRTVPDSAIQRIADKLRSLGI---TDHQSPXXXXXXXXXXGEIFVPLP 383
           P+KF IR SSS + T+PDSAIQRIADKL SLGI   T   S           GEIF+PLP
Sbjct: 28  PSKFTIRTSSSNSHTLPDSAIQRIADKLHSLGIITTTTGHSSSSSTTSTTTAGEIFLPLP 87

Query: 384 HQLPKQRVGHTIDQSWSTPENPVP--GKGFAALSENXXXXXXXXXXXXXXXXXXXXXXXX 557
           H LPK RVGHT+D SWSTPENPVP  G G   LSEN                        
Sbjct: 88  HTLPKYRVGHTLDLSWSTPENPVPLVGAGLEKLSEN-----EVERARLAKEKKREEKRKR 142

Query: 558 APTVAELSLTEAEIMRLRKL 617
            PT+AELSLT+ EI+RLR+L
Sbjct: 143 VPTLAELSLTDGEILRLREL 162


>ref|XP_004147480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Cucumis sativus]
          Length = 1032

 Score =  110 bits (276), Expect = 2e-22
 Identities = 64/136 (47%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
 Frame = +3

Query: 216 TKFVIRCSSSETRTVPDSAIQRIADKLRSLGITDHQ-SPXXXXXXXXXXGEIFVPLPHQL 392
           ++F++RC S ++ T+P SAIQRIADKLRSLG T+    P          G IFVPLP+QL
Sbjct: 40  SRFLLRCCSIDSETLPKSAIQRIADKLRSLGFTESPPEPLPDPNSPSAPGAIFVPLPNQL 99

Query: 393 PKQRVGHTIDQSWSTPENPVPGKGF-AALSENXXXXXXXXXXXXXXXXXXXXXXXXAPTV 569
           PK RVGHTID SWS PENPVP  G   A+                           AP++
Sbjct: 100 PKYRVGHTIDSSWSMPENPVPEPGTGTAIKRFHELRGEVQKWKKRDGVREKKREERAPSL 159

Query: 570 AELSLTEAEIMRLRKL 617
           AELSLTE E+ RLR +
Sbjct: 160 AELSLTEEELGRLRTI 175


>ref|XP_004164655.1| PREDICTED: LOW QUALITY PROTEIN: chloroplastic group IIA intron
           splicing facilitator CRS1, chloroplastic-like [Cucumis
           sativus]
          Length = 1053

 Score =  110 bits (275), Expect = 2e-22
 Identities = 65/139 (46%), Positives = 79/139 (56%), Gaps = 2/139 (1%)
 Frame = +3

Query: 207 LDPTKFVIRCSSSETRTVPDSAIQRIADKLRSLGITDHQS-PXXXXXXXXXXGEIFVPLP 383
           L  ++F++RC S ++ T+P SAIQRIADKLRSLG T+               G IFVPLP
Sbjct: 57  LKSSRFLLRCCSIDSETLPKSAIQRIADKLRSLGFTEXTPRTLPDPNSPSAPGAIFVPLP 116

Query: 384 HQLPKQRVGHTIDQSWSTPENPVPGKGF-AALSENXXXXXXXXXXXXXXXXXXXXXXXXA 560
           +QLPK RVGHTID SWSTPENPVP  G   A+                           A
Sbjct: 117 NQLPKYRVGHTIDSSWSTPENPVPEPGTGTAIKRFHELRGEVQKWKKRDGVREKKREERA 176

Query: 561 PTVAELSLTEAEIMRLRKL 617
           P++AELSLTE E+ RLR +
Sbjct: 177 PSLAELSLTEEELGRLRTI 195


>emb|CBI34982.3| unnamed protein product [Vitis vinifera]
          Length = 1028

 Score =  106 bits (265), Expect = 3e-21
 Identities = 64/143 (44%), Positives = 80/143 (55%), Gaps = 6/143 (4%)
 Frame = +3

Query: 201 KTLDP--TKFVIRCSSSETRTVPDSAIQRIADKLRSLGITDHQSPXXXXXXXXXX----G 362
           KTL+P  +KF++R S+ + +T+P +AIQRIA+KLRSLG  D                  G
Sbjct: 56  KTLNPKPSKFILRASNPDAQTLPKTAIQRIAEKLRSLGYVDGDESRKVLSSDKPANGSAG 115

Query: 363 EIFVPLPHQLPKQRVGHTIDQSWSTPENPVPGKGFAALSENXXXXXXXXXXXXXXXXXXX 542
           EIFVPLP+QLPK RVGHTIDQSWS PENPVP  G   +                      
Sbjct: 116 EIFVPLPNQLPKHRVGHTIDQSWSLPENPVPEPGTGGV---ITRFHELRKEVKREKKLVR 172

Query: 543 XXXXXAPTVAELSLTEAEIMRLR 611
                APT+AEL+L E E+ RL+
Sbjct: 173 KEDERAPTLAELTLPEEELRRLK 195


>ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Vitis vinifera]
          Length = 1044

 Score =  106 bits (265), Expect = 3e-21
 Identities = 64/143 (44%), Positives = 80/143 (55%), Gaps = 6/143 (4%)
 Frame = +3

Query: 201 KTLDP--TKFVIRCSSSETRTVPDSAIQRIADKLRSLGITDHQSPXXXXXXXXXX----G 362
           KTL+P  +KF++R S+ + +T+P +AIQRIA+KLRSLG  D                  G
Sbjct: 56  KTLNPKPSKFILRASNPDAQTLPKTAIQRIAEKLRSLGYVDGDESRKVLSSDKPANGSAG 115

Query: 363 EIFVPLPHQLPKQRVGHTIDQSWSTPENPVPGKGFAALSENXXXXXXXXXXXXXXXXXXX 542
           EIFVPLP+QLPK RVGHTIDQSWS PENPVP  G   +                      
Sbjct: 116 EIFVPLPNQLPKHRVGHTIDQSWSLPENPVPEPGTGGV---ITRFHELRKEVKREKKLVR 172

Query: 543 XXXXXAPTVAELSLTEAEIMRLR 611
                APT+AEL+L E E+ RL+
Sbjct: 173 KEDERAPTLAELTLPEEELRRLK 195