BLASTX nr result

ID: Glycyrrhiza24_contig00019494 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019494
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521127.1| PREDICTED: F-box protein At2g32560-like [Gly...   100   2e-19
ref|XP_003554122.1| PREDICTED: F-box protein At2g32560-like [Gly...    96   4e-18
gb|ABD33039.1| Cyclin-like F-box [Medicago truncatula]                 88   8e-16
gb|AFK37960.1| unknown [Medicago truncatula]                           88   8e-16
ref|XP_003624978.1| F-box protein [Medicago truncatula] gi|35549...    88   8e-16

>ref|XP_003521127.1| PREDICTED: F-box protein At2g32560-like [Glycine max]
          Length = 401

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 53/77 (68%), Positives = 62/77 (80%), Gaps = 3/77 (3%)
 Frame = -1

Query: 222 SSRNKEK-ASNQHNQKRVLANFLHGFLLPFK--SSKSGNGRQSRSSLPDDSIASLYLSLE 52
           +S+N+EK +SNQHNQK + A FL G  LPF    +KS  G +S SSLP+DSIA+LYLSLE
Sbjct: 156 ASKNREKISSNQHNQKGIFA-FLRGGFLPFIWIKAKSEKGTESSSSLPEDSIAALYLSLE 214

Query: 51  SGKFWFPAQVYNRENGH 1
           SGKFWFPAQVYNRENGH
Sbjct: 215 SGKFWFPAQVYNRENGH 231


>ref|XP_003554122.1| PREDICTED: F-box protein At2g32560-like [Glycine max]
          Length = 399

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 51/78 (65%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
 Frame = -1

Query: 228 VASSRNKEKASNQHNQKRVLANFLHGFLLPFK--SSKSGNGRQSRSSLPDDSIASLYLSL 55
           VAS   ++ +SNQHNQK + A FL+G  LP     +KS  G QS SSL +DSIA+LYLSL
Sbjct: 153 VASKTREKISSNQHNQKGIFA-FLNGGFLPLLWIKAKSEKGTQSNSSLSEDSIAALYLSL 211

Query: 54  ESGKFWFPAQVYNRENGH 1
           ESGKFWFPAQVYNRENGH
Sbjct: 212 ESGKFWFPAQVYNRENGH 229


>gb|ABD33039.1| Cyclin-like F-box [Medicago truncatula]
          Length = 394

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 51/75 (68%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
 Frame = -1

Query: 222 SSRNKEKASNQH-NQKRVLANFLHGFLLPFKSSKSGNGRQSRSSLPDDSIASLYLSLESG 46
           +S++ EK SNQH NQK VLA FLH FL PF   KS + +  +S  PDDSIA+LYLSLE+G
Sbjct: 155 ASKSIEKNSNQHKNQKTVLA-FLHAFL-PFFWIKSKSEKYIKSR-PDDSIAALYLSLENG 211

Query: 45  KFWFPAQVYNRENGH 1
           KFWFPAQVYNRENGH
Sbjct: 212 KFWFPAQVYNRENGH 226


>gb|AFK37960.1| unknown [Medicago truncatula]
          Length = 394

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 51/75 (68%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
 Frame = -1

Query: 222 SSRNKEKASNQH-NQKRVLANFLHGFLLPFKSSKSGNGRQSRSSLPDDSIASLYLSLESG 46
           +S++ EK SNQH NQK VLA FLH FL PF   KS + +  +S  PDDSIA+LYLSLE+G
Sbjct: 155 ASKSIEKNSNQHKNQKTVLA-FLHAFL-PFFWIKSKSEKYIKSR-PDDSIAALYLSLENG 211

Query: 45  KFWFPAQVYNRENGH 1
           KFWFPAQVYNRENGH
Sbjct: 212 KFWFPAQVYNRENGH 226


>ref|XP_003624978.1| F-box protein [Medicago truncatula] gi|355499993|gb|AES81196.1|
           F-box protein [Medicago truncatula]
          Length = 382

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 51/75 (68%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
 Frame = -1

Query: 222 SSRNKEKASNQH-NQKRVLANFLHGFLLPFKSSKSGNGRQSRSSLPDDSIASLYLSLESG 46
           +S++ EK SNQH NQK VLA FLH FL PF   KS + +  +S  PDDSIA+LYLSLE+G
Sbjct: 143 ASKSIEKNSNQHKNQKTVLA-FLHAFL-PFFWIKSKSEKYIKSR-PDDSIAALYLSLENG 199

Query: 45  KFWFPAQVYNRENGH 1
           KFWFPAQVYNRENGH
Sbjct: 200 KFWFPAQVYNRENGH 214


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