BLASTX nr result

ID: Glycyrrhiza24_contig00019479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019479
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278909.1| PREDICTED: pentatricopeptide repeat-containi...    38   3e-06

>ref|XP_002278909.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06270
           [Vitis vinifera] gi|302143379|emb|CBI21940.3| unnamed
           protein product [Vitis vinifera]
          Length = 343

 Score = 37.7 bits (86), Expect(3) = 3e-06
 Identities = 18/32 (56%), Positives = 23/32 (71%)
 Frame = +1

Query: 205 GLVIFLLSSLCTIDQLVDAVKVLKSMGRAALV 300
           G   +L+ SLC IDQLV+AV VLKSMG+   +
Sbjct: 172 GTCNYLILSLCAIDQLVEAVIVLKSMGQVGCI 203



 Score = 35.4 bits (80), Expect(3) = 3e-06
 Identities = 21/32 (65%), Positives = 23/32 (71%)
 Frame = +2

Query: 32  FLVPSKAPIPSLALAILQWILRSG*IIVPQTH 127
           F + S  P+P LALAILQ  LRSG I VPQTH
Sbjct: 108 FTLQSANPLP-LALAILQRTLRSGCIPVPQTH 138



 Score = 21.6 bits (44), Expect(3) = 3e-06
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +3

Query: 198 DCGTCNF 218
           DCGTCN+
Sbjct: 170 DCGTCNY 176


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