BLASTX nr result

ID: Glycyrrhiza24_contig00019469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019469
         (1182 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535051.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   479   e-133
ref|XP_003546242.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   478   e-132
ref|XP_002515824.1| Protein SEY1, putative [Ricinus communis] gi...   374   e-101
ref|XP_002322326.1| predicted protein [Populus trichocarpa] gi|2...   363   6e-98
ref|XP_002270213.2| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   362   1e-97

>ref|XP_003535051.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 2-like [Glycine max]
          Length = 829

 Score =  479 bits (1232), Expect = e-133
 Identities = 248/320 (77%), Positives = 270/320 (84%)
 Frame = -1

Query: 1179 RMQQSLRDYARKVVENKAREEAGKILIRMKDRFSTVFNHDSDSLPRIWTDKEDIRTITRD 1000
            RMQQSLRDYARKVVENKAR+EAGKILIRMKDRFSTVFNHD+DSLPR+WT KEDIR ITRD
Sbjct: 517  RMQQSLRDYARKVVENKARDEAGKILIRMKDRFSTVFNHDNDSLPRVWTGKEDIRAITRD 576

Query: 999  ARIASLKLLSDMAAIRLDEKSDRIESVLQSSLIDKTSAATSSQYTSREASVDPLASSTWE 820
            AR ASLKLLSDMAAIRLDEK DRIES L SSLIDKTSAATSSQY +REASVDPLASSTWE
Sbjct: 577  ARSASLKLLSDMAAIRLDEKPDRIESALYSSLIDKTSAATSSQYLTREASVDPLASSTWE 636

Query: 819  EVSPEETLITPVQCKSLWRQFQGETEYTVTQAISAQEAYKRSNNQLPSPWTMLAMAILGF 640
            EVSPE+ LITPVQCK+LWRQFQGETEYTVTQAISAQEAYKRSNN LP PW ++AM ILGF
Sbjct: 637  EVSPEDVLITPVQCKALWRQFQGETEYTVTQAISAQEAYKRSNNWLPPPWAIMAMVILGF 696

Query: 639  DEFMMLLKNPLYLIVIFVVYLIGKAIWIQMDIAGEFQHGTLAGLLAISSKFLPTVMNLLK 460
            +EFMMLLKNPLYL+ IFV YL+GKAIW+QMDIAGEF+HGTL GLL+ISSKFLPTVMNL+K
Sbjct: 697  NEFMMLLKNPLYLMFIFVAYLLGKAIWVQMDIAGEFRHGTLPGLLSISSKFLPTVMNLIK 756

Query: 459  RLAEEAQGGNRAPEGTEPQPQPQRSAAQIFRNQMERPDXXXXXXXXXXXXXXXXXDGDNE 280
            RLAEEAQ GN+ P+    + Q   S  QIFRN + +PD                   DNE
Sbjct: 757  RLAEEAQ-GNQTPQ----ESQGSTSQTQIFRNHVHKPD--SVSNSISNVSSVGSSVDDNE 809

Query: 279  YTTTNLSHRRRTNVPDAEFS 220
            Y+T NLSHRRRTN P+AEFS
Sbjct: 810  YSTANLSHRRRTNAPEAEFS 829


>ref|XP_003546242.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 2-like [Glycine max]
          Length = 829

 Score =  478 bits (1231), Expect = e-132
 Identities = 247/321 (76%), Positives = 271/321 (84%)
 Frame = -1

Query: 1182 ERMQQSLRDYARKVVENKAREEAGKILIRMKDRFSTVFNHDSDSLPRIWTDKEDIRTITR 1003
            ERMQQSLRDYARKVVENKAR+EAGKILIRMKDRFSTVFNHD+DSLPR+WT KED+R ITR
Sbjct: 516  ERMQQSLRDYARKVVENKARDEAGKILIRMKDRFSTVFNHDNDSLPRVWTGKEDVRAITR 575

Query: 1002 DARIASLKLLSDMAAIRLDEKSDRIESVLQSSLIDKTSAATSSQYTSREASVDPLASSTW 823
            DAR ASLKLLSDMAAIRLDEK DRIES L SSLIDKTSAATSSQY +REASVDPLASSTW
Sbjct: 576  DARSASLKLLSDMAAIRLDEKPDRIESALHSSLIDKTSAATSSQYLTREASVDPLASSTW 635

Query: 822  EEVSPEETLITPVQCKSLWRQFQGETEYTVTQAISAQEAYKRSNNQLPSPWTMLAMAILG 643
            EEVSPE+ LITPVQCK+LWRQFQGETEYTVTQAISAQEAYKRSNN LP PW ++AM ILG
Sbjct: 636  EEVSPEDVLITPVQCKALWRQFQGETEYTVTQAISAQEAYKRSNNWLPPPWAIMAMVILG 695

Query: 642  FDEFMMLLKNPLYLIVIFVVYLIGKAIWIQMDIAGEFQHGTLAGLLAISSKFLPTVMNLL 463
            F+EFM+LLKNPLYL+ IFV YL+GKAIW+QMDIAGEF+HGTL GLL+ISSKFLPT MNL+
Sbjct: 696  FNEFMLLLKNPLYLMFIFVAYLLGKAIWVQMDIAGEFRHGTLPGLLSISSKFLPTFMNLI 755

Query: 462  KRLAEEAQGGNRAPEGTEPQPQPQRSAAQIFRNQMERPDXXXXXXXXXXXXXXXXXDGDN 283
            KRLAEEAQ GN+ P+    + Q   S  QIFRNQ+ +PD                   DN
Sbjct: 756  KRLAEEAQ-GNQTPQ----ESQGSASQTQIFRNQVHKPD--SVSTSISNVSSVGLSVDDN 808

Query: 282  EYTTTNLSHRRRTNVPDAEFS 220
            EY+TTNLS RRRTN P+AEFS
Sbjct: 809  EYSTTNLSQRRRTNAPEAEFS 829


>ref|XP_002515824.1| Protein SEY1, putative [Ricinus communis] gi|223545053|gb|EEF46566.1|
            Protein SEY1, putative [Ricinus communis]
          Length = 779

 Score =  374 bits (960), Expect = e-101
 Identities = 183/249 (73%), Positives = 219/249 (87%)
 Frame = -1

Query: 1182 ERMQQSLRDYARKVVENKAREEAGKILIRMKDRFSTVFNHDSDSLPRIWTDKEDIRTITR 1003
            + M Q+LRDYAR VVE KAREEAGK+LIRMKDRFSTVF+HD+DS+PR+WT KEDIRTIT+
Sbjct: 515  DAMVQTLRDYARNVVEKKAREEAGKVLIRMKDRFSTVFSHDNDSMPRVWTGKEDIRTITK 574

Query: 1002 DARIASLKLLSDMAAIRLDEKSDRIESVLQSSLIDKTSAATSSQYTSREASVDPLASSTW 823
            DAR ASLKLLS M AIRLDEK D+IE+VL SSL+D T A   S+        DPLASSTW
Sbjct: 575  DARFASLKLLSVMTAIRLDEKPDKIENVLFSSLMDGTVAVLYSRDRIIGGISDPLASSTW 634

Query: 822  EEVSPEETLITPVQCKSLWRQFQGETEYTVTQAISAQEAYKRSNNQLPSPWTMLAMAILG 643
            EEVSP++TLITPVQCKSLWRQF+ ETEYT+TQAISAQEA++RSNN LP PW ++AM +LG
Sbjct: 635  EEVSPKDTLITPVQCKSLWRQFKAETEYTITQAISAQEAHRRSNNWLPPPWAIVAMIVLG 694

Query: 642  FDEFMMLLKNPLYLIVIFVVYLIGKAIWIQMDIAGEFQHGTLAGLLAISSKFLPTVMNLL 463
            F+EFM+LLKNPLYL+++FV +L+ KA+W+QMDIAGEFQ+GTLAG+L+ISS+FLPT+MNLL
Sbjct: 695  FNEFMLLLKNPLYLVILFVAFLLSKALWVQMDIAGEFQNGTLAGILSISSRFLPTLMNLL 754

Query: 462  KRLAEEAQG 436
            +RLAEEAQG
Sbjct: 755  RRLAEEAQG 763


>ref|XP_002322326.1| predicted protein [Populus trichocarpa] gi|222869322|gb|EEF06453.1|
            predicted protein [Populus trichocarpa]
          Length = 721

 Score =  363 bits (931), Expect = 6e-98
 Identities = 178/249 (71%), Positives = 216/249 (86%)
 Frame = -1

Query: 1182 ERMQQSLRDYARKVVENKAREEAGKILIRMKDRFSTVFNHDSDSLPRIWTDKEDIRTITR 1003
            + M Q+LR+Y R VVE KAREEAGK+LIRMKDRF+T+FNHD+DS+PR+WT KEDIR IT+
Sbjct: 467  DTMVQNLREYGRNVVEKKAREEAGKVLIRMKDRFTTIFNHDNDSMPRVWTGKEDIRAITK 526

Query: 1002 DARIASLKLLSDMAAIRLDEKSDRIESVLQSSLIDKTSAATSSQYTSREASVDPLASSTW 823
            DAR ASLK+LS +AAIRLDEKSD IE+VL SSL D T +  SS+  S  AS D LASSTW
Sbjct: 527  DARSASLKILSTLAAIRLDEKSDDIENVLFSSLSDGTVSVPSSKDRSIGASSDSLASSTW 586

Query: 822  EEVSPEETLITPVQCKSLWRQFQGETEYTVTQAISAQEAYKRSNNQLPSPWTMLAMAILG 643
            +EVSP+ TL+TPVQCKSLWRQF+ ETEY+VTQAISAQEA+KRSNN LP PW ++AM +LG
Sbjct: 587  KEVSPKATLLTPVQCKSLWRQFKAETEYSVTQAISAQEAHKRSNNWLPPPWAIVAMVVLG 646

Query: 642  FDEFMMLLKNPLYLIVIFVVYLIGKAIWIQMDIAGEFQHGTLAGLLAISSKFLPTVMNLL 463
            F+EFM+LL+NPLYL+V+FVVYL+ KA+W+QMDI GEF++G L G+L+ISS+ LPTVMNLL
Sbjct: 647  FNEFMVLLRNPLYLLVLFVVYLLSKALWVQMDITGEFRNGALPGILSISSRLLPTVMNLL 706

Query: 462  KRLAEEAQG 436
            +RLAEEAQG
Sbjct: 707  RRLAEEAQG 715


>ref|XP_002270213.2| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 2 [Vitis vinifera]
          Length = 808

 Score =  362 bits (928), Expect = 1e-97
 Identities = 181/260 (69%), Positives = 217/260 (83%)
 Frame = -1

Query: 1179 RMQQSLRDYARKVVENKAREEAGKILIRMKDRFSTVFNHDSDSLPRIWTDKEDIRTITRD 1000
            +M Q+L++YAR VVE KAREEAGK+LI MKDRFSTVFNHD DS+PR+WT KE+IR IT+D
Sbjct: 498  KMMQNLKEYARIVVEKKAREEAGKVLILMKDRFSTVFNHDHDSMPRVWTGKENIRIITKD 557

Query: 999  ARIASLKLLSDMAAIRLDEKSDRIESVLQSSLIDKTSAATSSQYTSREASVDPLASSTWE 820
            A  ASLKLLS MAAIRL+EK D+IE+VL SSL+D T +   SQ     AS DPLASSTWE
Sbjct: 558  AYSASLKLLSVMAAIRLNEKPDKIENVLFSSLMDGTVSVPLSQDKKMGASPDPLASSTWE 617

Query: 819  EVSPEETLITPVQCKSLWRQFQGETEYTVTQAISAQEAYKRSNNQLPSPWTMLAMAILGF 640
            EV P +TLITPVQCKSLWRQF+ ETEY VTQAISAQEA+K+S+N LP PW ++AM +LGF
Sbjct: 618  EVPPNKTLITPVQCKSLWRQFKAETEYIVTQAISAQEAHKQSSNWLPPPWAIVAMVVLGF 677

Query: 639  DEFMMLLKNPLYLIVIFVVYLIGKAIWIQMDIAGEFQHGTLAGLLAISSKFLPTVMNLLK 460
            +EFM+LLKNPLYL+V F+++L+ KA+W+QMD+ GEF +G LAGLLAISS+FLPTVMNLL+
Sbjct: 678  NEFMLLLKNPLYLMVFFIIFLLSKALWVQMDLTGEFHNGNLAGLLAISSRFLPTVMNLLR 737

Query: 459  RLAEEAQGGNRAPEGTEPQP 400
            RLAEEAQ GN  P+   P P
Sbjct: 738  RLAEEAQ-GNPTPQPPRPPP 756


Top