BLASTX nr result

ID: Glycyrrhiza24_contig00019465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019465
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containi...   246   1e-63
ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250...   230   8e-59
emb|CBI36868.3| unnamed protein product [Vitis vinifera]              230   8e-59
ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp....   208   4e-52
ref|NP_191848.2| pentatricopeptide repeat-containing protein [Ar...   207   9e-52

>ref|XP_003536884.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g62890-like [Glycine max]
          Length = 1116

 Score =  246 bits (628), Expect = 1e-63
 Identities = 115/139 (82%), Positives = 128/139 (92%)
 Frame = -2

Query: 420 RDLMEVRGIKKVPGCSLVEIDGVLHEFFVGDDSHPETQNIHRMLEEIMKRLEKKGYVRNT 241
           RDLMEVRGIKK+PGCSLVE+DGV+ EFF GD+SHPE  N++ ML+EIMKRLEK GY RNT
Sbjct: 422 RDLMEVRGIKKLPGCSLVEVDGVIREFFAGDNSHPELLNLYVMLDEIMKRLEKHGYERNT 481

Query: 240 SEVLLDLDEEGKEFALSLHSEKLAVAYCFLRTSPGTTIRIVKNLRICGDCHVVMKMISRE 61
            EVLLDLDEEGKEFALSLHSEKLA+AYCFLRTSPGTTIRIVKNLRIC DCHV +K+IS+E
Sbjct: 482 GEVLLDLDEEGKEFALSLHSEKLAIAYCFLRTSPGTTIRIVKNLRICSDCHVAIKIISKE 541

Query: 60  FKREIVVRDCNRFHHFRNG 4
           F REI+VRDCNRFHHF+NG
Sbjct: 542 FNREIIVRDCNRFHHFKNG 560


>ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
          Length = 1130

 Score =  230 bits (587), Expect = 8e-59
 Identities = 110/139 (79%), Positives = 122/139 (87%)
 Frame = -2

Query: 420 RDLMEVRGIKKVPGCSLVEIDGVLHEFFVGDDSHPETQNIHRMLEEIMKRLEKKGYVRNT 241
           RDLME  GIKKVPGCSL+E+ GVLHEFFVGDDSHPET+ IH MLEEI++RL+ +GYV NT
Sbjct: 426 RDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNT 485

Query: 240 SEVLLDLDEEGKEFALSLHSEKLAVAYCFLRTSPGTTIRIVKNLRICGDCHVVMKMISRE 61
            EVLLDLDEEGKE ALSLHSEKLA+AY FL+TSPGT IRIVKNLRIC DCHV +KMIS+ 
Sbjct: 486 KEVLLDLDEEGKELALSLHSEKLALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISKV 545

Query: 60  FKREIVVRDCNRFHHFRNG 4
           F REI+VRDCNRFHHF  G
Sbjct: 546 FDREIIVRDCNRFHHFTQG 564


>emb|CBI36868.3| unnamed protein product [Vitis vinifera]
          Length = 541

 Score =  230 bits (587), Expect = 8e-59
 Identities = 110/139 (79%), Positives = 122/139 (87%)
 Frame = -2

Query: 420 RDLMEVRGIKKVPGCSLVEIDGVLHEFFVGDDSHPETQNIHRMLEEIMKRLEKKGYVRNT 241
           RDLME  GIKKVPGCSL+E+ GVLHEFFVGDDSHPET+ IH MLEEI++RL+ +GYV NT
Sbjct: 395 RDLMETMGIKKVPGCSLIEVGGVLHEFFVGDDSHPETRQIHMMLEEILERLKVEGYVGNT 454

Query: 240 SEVLLDLDEEGKEFALSLHSEKLAVAYCFLRTSPGTTIRIVKNLRICGDCHVVMKMISRE 61
            EVLLDLDEEGKE ALSLHSEKLA+AY FL+TSPGT IRIVKNLRIC DCHV +KMIS+ 
Sbjct: 455 KEVLLDLDEEGKELALSLHSEKLALAYGFLKTSPGTPIRIVKNLRICRDCHVAIKMISKV 514

Query: 60  FKREIVVRDCNRFHHFRNG 4
           F REI+VRDCNRFHHF  G
Sbjct: 515 FDREIIVRDCNRFHHFTQG 533


>ref|XP_002876693.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322531|gb|EFH52952.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 572

 Score =  208 bits (529), Expect = 4e-52
 Identities = 96/139 (69%), Positives = 118/139 (84%)
 Frame = -2

Query: 420 RDLMEVRGIKKVPGCSLVEIDGVLHEFFVGDDSHPETQNIHRMLEEIMKRLEKKGYVRNT 241
           R  MEV+GIKKVPGCS VE++GV+HEF VGD+S  E++ I+ MLEEIM+RL + GYV +T
Sbjct: 426 RHEMEVKGIKKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLEEIMQRLREAGYVSDT 485

Query: 240 SEVLLDLDEEGKEFALSLHSEKLAVAYCFLRTSPGTTIRIVKNLRICGDCHVVMKMISRE 61
            EVLLDL+E+ KE ALS HSEKLA+A+C ++T PGT +RI+KNLRICGDCH+VMKMIS+ 
Sbjct: 486 KEVLLDLEEKDKEMALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKL 545

Query: 60  FKREIVVRDCNRFHHFRNG 4
           F REIVVRDCNRFHHF +G
Sbjct: 546 FSREIVVRDCNRFHHFSDG 564


>ref|NP_191848.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75116883|sp|Q683I9.1|PP295_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g62890 gi|51968398|dbj|BAD42891.1| putative protein
           [Arabidopsis thaliana] gi|332646886|gb|AEE80407.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 573

 Score =  207 bits (526), Expect = 9e-52
 Identities = 95/139 (68%), Positives = 118/139 (84%)
 Frame = -2

Query: 420 RDLMEVRGIKKVPGCSLVEIDGVLHEFFVGDDSHPETQNIHRMLEEIMKRLEKKGYVRNT 241
           R  MEV+GI KVPGCS VE++GV+HEF VGD+S  E++ I+ ML+EIM+RL + GYV +T
Sbjct: 427 RHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDT 486

Query: 240 SEVLLDLDEEGKEFALSLHSEKLAVAYCFLRTSPGTTIRIVKNLRICGDCHVVMKMISRE 61
            EVLLDL+E+ KE ALS HSEKLA+A+C ++T PGT +RI+KNLRICGDCH+VMKMIS+ 
Sbjct: 487 KEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKL 546

Query: 60  FKREIVVRDCNRFHHFRNG 4
           F REIVVRDCNRFHHFR+G
Sbjct: 547 FSREIVVRDCNRFHHFRDG 565


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