BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019462
         (1046 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549241.1| PREDICTED: pentatricopeptide repeat-containi...   180   6e-43
ref|XP_003588687.1| Pentatricopeptide repeat-containing protein ...   161   2e-37
ref|XP_002308636.1| predicted protein [Populus trichocarpa] gi|2...   153   6e-35
ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containi...   149   1e-33
ref|XP_002516618.1| pentatricopeptide repeat-containing protein,...   139   2e-30

>ref|XP_003549241.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
            mitochondrial-like [Glycine max]
          Length = 622

 Score =  180 bits (456), Expect = 6e-43
 Identities = 87/114 (76%), Positives = 103/114 (90%)
 Frame = -3

Query: 1044 EFEDMIRRGIVPQYITFQKMNVELKRRGMTEMAQKLCSLMSSVPHSTNLPNTYGEDRDDA 865
            EFEDMIRRGIVPQY+TFQ+M  +LK++GMTEMAQKLC LMSSVP+S NLPNTYGE R+DA
Sbjct: 508  EFEDMIRRGIVPQYLTFQRMKADLKKQGMTEMAQKLCKLMSSVPYSPNLPNTYGEVREDA 567

Query: 864  HARRKSIIQKAQAFSDLLKDCKDPRELDKYRSSSEDAVSSANCLIEDIKKKTST 703
            +ARRKSII+KA+AFSD+LKDCKDP EL K+RSSSE+ VSS N LIEDI++K +T
Sbjct: 568  YARRKSIIRKAKAFSDMLKDCKDPSELRKHRSSSENTVSSTNSLIEDIERKRNT 621


>ref|XP_003588687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355477735|gb|AES58938.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 587

 Score =  161 bits (408), Expect = 2e-37
 Identities = 81/102 (79%), Positives = 92/102 (90%)
 Frame = -3

Query: 1044 EFEDMIRRGIVPQYITFQKMNVELKRRGMTEMAQKLCSLMSSVPHSTNLPNTYGEDRDDA 865
            EFEDMIRRGI+PQY+TFQK+NVELK++GM EMA+KLC LMSSVP+S  LPNTYGE RDDA
Sbjct: 486  EFEDMIRRGIIPQYLTFQKLNVELKKQGMNEMARKLCHLMSSVPYSDKLPNTYGEVRDDA 545

Query: 864  HARRKSIIQKAQAFSDLLKDCKDPRELDKYRSSSEDAVSSAN 739
            HARRKSIIQKA+A S+LL   KDP+ELDK+RSSSEDAVSS N
Sbjct: 546  HARRKSIIQKAKAVSELL---KDPKELDKFRSSSEDAVSSLN 584


>ref|XP_002308636.1| predicted protein [Populus trichocarpa] gi|222854612|gb|EEE92159.1|
            predicted protein [Populus trichocarpa]
          Length = 607

 Score =  153 bits (387), Expect = 6e-35
 Identities = 75/115 (65%), Positives = 93/115 (80%), Gaps = 1/115 (0%)
 Frame = -3

Query: 1044 EFEDMIRRGIVPQYITFQKMNVELKRRGMTEMAQKLCSLMSSVPHSTNLPNTYGEDRD-D 868
            EFEDM+RRGIVPQY+TF ++N E +++G+TE+A++LC LMSSV HS NLPNTY  DRD  
Sbjct: 493  EFEDMLRRGIVPQYLTFHRLNDEFRKQGLTELARRLCKLMSSVSHSKNLPNTYNVDRDAS 552

Query: 867  AHARRKSIIQKAQAFSDLLKDCKDPRELDKYRSSSEDAVSSANCLIEDIKKKTST 703
             HARRKSI+QKA   S++LK C DPREL K+RSSS++  SSAN LIEDIKK+  T
Sbjct: 553  RHARRKSILQKAGVMSEILKTCNDPRELVKHRSSSQNPESSANQLIEDIKKRAKT 607


>ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
            mitochondrial [Vitis vinifera]
            gi|296081989|emb|CBI20994.3| unnamed protein product
            [Vitis vinifera]
          Length = 597

 Score =  149 bits (376), Expect = 1e-33
 Identities = 72/113 (63%), Positives = 92/113 (81%)
 Frame = -3

Query: 1044 EFEDMIRRGIVPQYITFQKMNVELKRRGMTEMAQKLCSLMSSVPHSTNLPNTYGEDRDDA 865
            EFEDMIRRGIVPQY+TF++MN  L++RG+TEMA+KLC +M+SVPHS+ LPNTY  D D +
Sbjct: 483  EFEDMIRRGIVPQYLTFERMNNALRKRGLTEMARKLCDMMASVPHSSKLPNTYSGDGDAS 542

Query: 864  HARRKSIIQKAQAFSDLLKDCKDPRELDKYRSSSEDAVSSANCLIEDIKKKTS 706
             AR+ SIIQ+A+A SD+LK C DPREL K RSS E+ V  A+ LIEDIK++ +
Sbjct: 543  RARKTSIIQRAEAMSDILKTCNDPRELVKRRSSFENTVLVADQLIEDIKRRAN 595


>ref|XP_002516618.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223544438|gb|EEF45959.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 577

 Score =  139 bits (349), Expect = 2e-30
 Identities = 69/114 (60%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
 Frame = -3

Query: 1044 EFEDMIRRGIVPQYITFQKMNVELKRRGMTEMAQKLCSLMSSVPHSTNLPNTYGEDRDD- 868
            EFEDMI++GIVPQY+TFQ++N EL++RGM E A+KL  +MSSVPHSTNLPNTY  + D  
Sbjct: 462  EFEDMIQKGIVPQYLTFQRLNDELRKRGMVERARKLSDMMSSVPHSTNLPNTYSVEGDAL 521

Query: 867  AHARRKSIIQKAQAFSDLLKDCKDPRELDKYRSSSEDAVSSANCLIEDIKKKTS 706
              ARR SI+QKA+A S +LK C DPREL K +SSS++ ++SA  LIE+I+K+ +
Sbjct: 522  RRARRSSILQKAEAMSKILKTCNDPRELVKLKSSSQNPITSAIQLIENIRKRVN 575