BLASTX nr result

ID: Glycyrrhiza24_contig00019457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019457
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK40800.1| unknown [Medicago truncatula]                          198   8e-49
ref|NP_001236050.1| uncharacterized protein LOC100527179 [Glycin...   190   3e-46
ref|XP_003551777.1| PREDICTED: upstream activation factor subuni...   188   1e-45
ref|XP_002322444.1| predicted protein [Populus trichocarpa] gi|2...   187   1e-45
gb|ABE11612.1| SWIb domain-containing protein [Solanum chacoense]     184   2e-44

>gb|AFK40800.1| unknown [Medicago truncatula]
          Length = 100

 Score =  198 bits (504), Expect = 8e-49
 Identities = 96/100 (96%), Positives = 98/100 (98%)
 Frame = -3

Query: 558 MLPQRMKKAVTDNPKKLANLIDLVNLPSTLRDFLGQSQISRLGCFMRVWSYIKTNNLQDP 379
           MLPQRMKKAVTDNPKKLANLIDLVNLPSTLRDF+GQSQ SRL CFMRVWSYIKTNNLQDP
Sbjct: 1   MLPQRMKKAVTDNPKKLANLIDLVNLPSTLRDFVGQSQTSRLSCFMRVWSYIKTNNLQDP 60

Query: 378 NNKNVVNCDEKLKGILLGKPQVELAELPALIKLHFPKEPK 259
           NNKNVVNCDEKLKGILLGKPQV+LAELPALIKLHFPKEPK
Sbjct: 61  NNKNVVNCDEKLKGILLGKPQVDLAELPALIKLHFPKEPK 100


>ref|NP_001236050.1| uncharacterized protein LOC100527179 [Glycine max]
           gi|255631726|gb|ACU16230.1| unknown [Glycine max]
          Length = 100

 Score =  190 bits (482), Expect = 3e-46
 Identities = 91/100 (91%), Positives = 96/100 (96%)
 Frame = -3

Query: 558 MLPQRMKKAVTDNPKKLANLIDLVNLPSTLRDFLGQSQISRLGCFMRVWSYIKTNNLQDP 379
           MLPQRMKKA+TDNPKKLANLIDLVNLPSTLR+F+GQSQISRLGCF  +WSYIKTNNLQD 
Sbjct: 1   MLPQRMKKAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKCIWSYIKTNNLQDQ 60

Query: 378 NNKNVVNCDEKLKGILLGKPQVELAELPALIKLHFPKEPK 259
           NNKNVVNCDEKLK ILLGKPQVELAELPALIK+HFPKEPK
Sbjct: 61  NNKNVVNCDEKLKSILLGKPQVELAELPALIKMHFPKEPK 100


>ref|XP_003551777.1| PREDICTED: upstream activation factor subunit spp27-like [Glycine
           max]
          Length = 100

 Score =  188 bits (477), Expect = 1e-45
 Identities = 91/100 (91%), Positives = 95/100 (95%)
 Frame = -3

Query: 558 MLPQRMKKAVTDNPKKLANLIDLVNLPSTLRDFLGQSQISRLGCFMRVWSYIKTNNLQDP 379
           MLPQRMKKA+TDNPKKLANLIDLVNLPSTLR+F+GQSQISRLGCF  VW YIKTNNLQD 
Sbjct: 1   MLPQRMKKAITDNPKKLANLIDLVNLPSTLREFVGQSQISRLGCFKCVWFYIKTNNLQDQ 60

Query: 378 NNKNVVNCDEKLKGILLGKPQVELAELPALIKLHFPKEPK 259
           NNKNVVNCDEKLK ILLGKPQVELAELPALIK+HFPKEPK
Sbjct: 61  NNKNVVNCDEKLKSILLGKPQVELAELPALIKMHFPKEPK 100


>ref|XP_002322444.1| predicted protein [Populus trichocarpa] gi|222869440|gb|EEF06571.1|
           predicted protein [Populus trichocarpa]
          Length = 100

 Score =  187 bits (476), Expect = 1e-45
 Identities = 90/100 (90%), Positives = 95/100 (95%)
 Frame = -3

Query: 558 MLPQRMKKAVTDNPKKLANLIDLVNLPSTLRDFLGQSQISRLGCFMRVWSYIKTNNLQDP 379
           MLPQ+MKKA+TDNPK+LANLIDLVNLPSTLRDF+GQSQIS LGCFMRVWSYIKTNNLQDP
Sbjct: 1   MLPQKMKKAITDNPKQLANLIDLVNLPSTLRDFVGQSQISHLGCFMRVWSYIKTNNLQDP 60

Query: 378 NNKNVVNCDEKLKGILLGKPQVELAELPALIKLHFPKEPK 259
           NNKNVVNCDEKLK ILLGK QVEL ELPALIKLHFPK+ K
Sbjct: 61  NNKNVVNCDEKLKSILLGKQQVELVELPALIKLHFPKQKK 100


>gb|ABE11612.1| SWIb domain-containing protein [Solanum chacoense]
          Length = 100

 Score =  184 bits (467), Expect = 2e-44
 Identities = 86/100 (86%), Positives = 93/100 (93%)
 Frame = -3

Query: 558 MLPQRMKKAVTDNPKKLANLIDLVNLPSTLRDFLGQSQISRLGCFMRVWSYIKTNNLQDP 379
           MLPQRMKK +TDNPKKLANLIDLVNLPSTLR+F+GQSQ SRLGCF RVWSYIK NNLQDP
Sbjct: 1   MLPQRMKKVMTDNPKKLANLIDLVNLPSTLREFMGQSQTSRLGCFKRVWSYIKENNLQDP 60

Query: 378 NNKNVVNCDEKLKGILLGKPQVELAELPALIKLHFPKEPK 259
           NNKN+VNCDEKLK +LLGKPQVEL ELP LIKLHFPK+P+
Sbjct: 61  NNKNLVNCDEKLKSVLLGKPQVELTELPTLIKLHFPKQPR 100


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