BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019442
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548486.1| PREDICTED: transcription-repair-coupling fac...   182   2e-44
ref|XP_002320427.1| predicted protein [Populus trichocarpa] gi|2...   181   4e-44
ref|XP_003553316.1| PREDICTED: transcription-repair-coupling fac...   181   7e-44
ref|XP_002512803.1| dead box ATP-dependent RNA helicase, putativ...   177   8e-43
emb|CBI21248.3| unnamed protein product [Vitis vinifera]              176   1e-42

>ref|XP_003548486.1| PREDICTED: transcription-repair-coupling factor-like [Glycine max]
          Length = 826

 Score =  182 bits (463), Expect = 2e-44
 Identities = 85/99 (85%), Positives = 96/99 (96%)
 Frame = +2

Query: 2   GTIFGEQQTGDVGNVGIDLFFEMLFESLSKVDDHRIVAVPYRSVQVDLNISPPLPSEYIN 181
           G IFGEQQ+GDVGNVGIDLFFEMLFESLSKV+DHR+V+VPY SVQVD+NI+P LPS+YIN
Sbjct: 630 GAIFGEQQSGDVGNVGIDLFFEMLFESLSKVEDHRVVSVPYHSVQVDININPHLPSDYIN 689

Query: 182 YLENPMEILNEAERVAEKDIWSLMQFTENLRRQYGKEPR 298
           YLENP++I+N+AERVAEKDIWSLMQFTENLRRQYGKEPR
Sbjct: 690 YLENPLKIINDAERVAEKDIWSLMQFTENLRRQYGKEPR 728


>ref|XP_002320427.1| predicted protein [Populus trichocarpa] gi|222861200|gb|EEE98742.1|
           predicted protein [Populus trichocarpa]
          Length = 817

 Score =  181 bits (460), Expect = 4e-44
 Identities = 83/98 (84%), Positives = 94/98 (95%)
 Frame = +2

Query: 2   GTIFGEQQTGDVGNVGIDLFFEMLFESLSKVDDHRIVAVPYRSVQVDLNISPPLPSEYIN 181
           GTIFGEQQTGDVGNVG+D FFEMLFESLSKVD+HR+++VPY+SVQ+DLNI+P LPS+YIN
Sbjct: 621 GTIFGEQQTGDVGNVGVDFFFEMLFESLSKVDEHRVISVPYQSVQIDLNINPHLPSDYIN 680

Query: 182 YLENPMEILNEAERVAEKDIWSLMQFTENLRRQYGKEP 295
           YLENPMEI+NEAE+ AE DIWSLMQFTENLRRQYGKEP
Sbjct: 681 YLENPMEIINEAEKAAETDIWSLMQFTENLRRQYGKEP 718


>ref|XP_003553316.1| PREDICTED: transcription-repair-coupling factor-like [Glycine max]
          Length = 823

 Score =  181 bits (458), Expect = 7e-44
 Identities = 84/99 (84%), Positives = 95/99 (95%)
 Frame = +2

Query: 2   GTIFGEQQTGDVGNVGIDLFFEMLFESLSKVDDHRIVAVPYRSVQVDLNISPPLPSEYIN 181
           G IFGEQQ+GDVGNVGIDLFFEMLFESLSKV+DH +V+VPY SVQVD+NI+P LPS+YIN
Sbjct: 627 GAIFGEQQSGDVGNVGIDLFFEMLFESLSKVEDHHVVSVPYHSVQVDININPHLPSDYIN 686

Query: 182 YLENPMEILNEAERVAEKDIWSLMQFTENLRRQYGKEPR 298
           YL+NPM+I+N+AERVAEKDIWSLMQFTENLRRQYGKEPR
Sbjct: 687 YLDNPMKIINDAERVAEKDIWSLMQFTENLRRQYGKEPR 725


>ref|XP_002512803.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223547814|gb|EEF49306.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 857

 Score =  177 bits (449), Expect = 8e-43
 Identities = 82/98 (83%), Positives = 95/98 (96%)
 Frame = +2

Query: 2   GTIFGEQQTGDVGNVGIDLFFEMLFESLSKVDDHRIVAVPYRSVQVDLNISPPLPSEYIN 181
           GTIFGEQQTGDVGNVGIDLFFEMLFESLSKV++HR+VAV Y+SVQ+DLN++P LPS+YIN
Sbjct: 629 GTIFGEQQTGDVGNVGIDLFFEMLFESLSKVEEHRVVAVSYQSVQIDLNVNPHLPSDYIN 688

Query: 182 YLENPMEILNEAERVAEKDIWSLMQFTENLRRQYGKEP 295
           YLENPMEI+++AE+ AEKDIWSLMQFTE+LRRQYGKEP
Sbjct: 689 YLENPMEIISQAEKAAEKDIWSLMQFTESLRRQYGKEP 726


>emb|CBI21248.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  176 bits (447), Expect = 1e-42
 Identities = 82/98 (83%), Positives = 94/98 (95%)
 Frame = +2

Query: 2   GTIFGEQQTGDVGNVGIDLFFEMLFESLSKVDDHRIVAVPYRSVQVDLNISPPLPSEYIN 181
           G IFGEQQTGDVGNVGIDLFFEMLFESLSKV++HR+++VPY+SVQ D+NI+P LPSEYIN
Sbjct: 444 GNIFGEQQTGDVGNVGIDLFFEMLFESLSKVEEHRLISVPYQSVQFDININPHLPSEYIN 503

Query: 182 YLENPMEILNEAERVAEKDIWSLMQFTENLRRQYGKEP 295
           YLENPMEI++EAE+ AE+DIWSLMQFTENLRRQYGKEP
Sbjct: 504 YLENPMEIISEAEKSAEEDIWSLMQFTENLRRQYGKEP 541