BLASTX nr result

ID: Glycyrrhiza24_contig00019438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019438
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48593.1| unknown [Lotus japonicus]                              102   4e-20
gb|ABN09101.1| Ribonuclease H [Medicago truncatula]                    92   3e-17
gb|ABE80156.1| Ribonuclease H [Medicago truncatula]                    91   1e-16
gb|ABD28646.1| Ribonuclease H [Medicago truncatula]                    90   2e-16
ref|XP_003620113.1| Resistance protein PRG [Medicago truncatula]...    88   8e-16

>gb|AFK48593.1| unknown [Lotus japonicus]
          Length = 272

 Score =  102 bits (253), Expect = 4e-20
 Identities = 60/140 (42%), Positives = 76/140 (54%), Gaps = 15/140 (10%)
 Frame = -3

Query: 468 VLNVDGSSLGNPSPVGFGGLLQIGEGEWIFGFYGSIGTSENLQAEL-------------- 331
           VLNVDGS  G P   GFGG  +   G W+ GF+G +     L  EL              
Sbjct: 116 VLNVDGSVHGTPQRGGFGGCFRTIHGNWLRGFFGYLDECCILHLELLGMFHGLSLAWEQG 175

Query: 330 HRLV-CYSDSKSAIELSKAHVSATHAYAALILKTNDLLQREWEIELIHTLREGNGSADVL 154
           +R+V C SDS+ A+ L K+  S+ H YAAL+    DL  R+W +EL HTLREGN  AD+L
Sbjct: 176 YRIVECQSDSQDAVTLVKSTPSSCHRYAALVWDIKDLQSRDWIVELRHTLREGNACADLL 235

Query: 153 AKLGASQQDKMKILPSPPGG 94
            K GA Q D + I  +P  G
Sbjct: 236 VKHGADQNDDLVITENPIAG 255


>gb|ABN09101.1| Ribonuclease H [Medicago truncatula]
          Length = 170

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 54/149 (36%), Positives = 74/149 (49%), Gaps = 15/149 (10%)
 Frame = -3

Query: 501 VIWHSSRTLLPVLNVDGSSLGNPSPVGFGGLLQIGEGEWIFGFYGSIGTSENLQAELHRL 322
           + WH        +NVDGSS GNP   GFGGL++   G WI GF  S G   NL  EL+ +
Sbjct: 2   IAWHPPTAPGLKINVDGSSFGNPGRAGFGGLIRNDVGGWIHGFSESCGRVSNLLVELYAI 61

Query: 321 V---------------CYSDSKSAIELSKAHVSATHAYAALILKTNDLLQREWEIELIHT 187
           +                  D KSA++L   + +  H +A ++ +   L+ R+W +   HT
Sbjct: 62  LNGLQLAWDLGFRIITLEPDYKSALDLILDNDTTYHPHAIVLGRIRTLMSRDWSLLFNHT 121

Query: 186 LREGNGSADVLAKLGASQQDKMKILPSPP 100
           LREGN  AD LAK  A     +K+  SPP
Sbjct: 122 LREGNECADWLAKYDAQSDVSLKLWVSPP 150


>gb|ABE80156.1| Ribonuclease H [Medicago truncatula]
          Length = 438

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 62/150 (41%), Positives = 77/150 (51%), Gaps = 16/150 (10%)
 Frame = -3

Query: 501 VIWHSSRTLLPVLNVDGSSLGNPSPVGFGGLLQIGEGEWIFGFYGSIGTSEN-LQAEL-- 331
           V W++      +LNVDGS LG PS  G+GG+L+   G +I GF G I  S + LQAEL  
Sbjct: 271 VKWNNRNHHDHILNVDGSCLGTPSRTGYGGILRNSAGLFISGFSGFIPNSTDILQAELTA 330

Query: 330 -------------HRLVCYSDSKSAIELSKAHVSATHAYAALILKTNDLLQREWEIELIH 190
                        + ++CYSDS  A+ L        H YA LI    DLL     I L H
Sbjct: 331 IHQSLHMVIDSNMNDVMCYSDSLLAVNLIMNDTPRYHTYAVLIQNIKDLLSVR-NITLHH 389

Query: 189 TLREGNGSADVLAKLGASQQDKMKILPSPP 100
           TLREGN  AD  AKLGA+    + +  SPP
Sbjct: 390 TLREGNQCADFFAKLGANSDVHLVVHQSPP 419


>gb|ABD28646.1| Ribonuclease H [Medicago truncatula]
          Length = 208

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 61/150 (40%), Positives = 77/150 (51%), Gaps = 16/150 (10%)
 Frame = -3

Query: 501 VIWHSSRTLLPVLNVDGSSLGNPSPVGFGGLLQIGEGEWIFGFYGSIGTSEN-LQAEL-- 331
           V W+S+  L  +LNVDGS  G P+  G+GG+++   G ++  F G I  S + L AEL  
Sbjct: 41  VRWNSNNHLCHILNVDGSCSGIPTRAGYGGIIRNSAGLYLSCFSGFIADSTDILLAELTA 100

Query: 330 -HR------------LVCYSDSKSAIELSKAHVSATHAYAALILKTNDLLQREWEIELIH 190
            HR            + CYSDS  +I L     S  HAYA LI    DLL       + H
Sbjct: 101 IHRGFSIASDMGVNEMACYSDSLLSINLITGQASKYHAYAVLIQDIKDLLSSH-NFSIQH 159

Query: 189 TLREGNGSADVLAKLGASQQDKMKILPSPP 100
            LREGN  AD +AK GAS  +   I PSPP
Sbjct: 160 CLREGNQCADFMAKFGASSNNVCFIHPSPP 189


>ref|XP_003620113.1| Resistance protein PRG [Medicago truncatula]
            gi|355495128|gb|AES76331.1| Resistance protein PRG
            [Medicago truncatula]
          Length = 1256

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 57/148 (38%), Positives = 76/148 (51%), Gaps = 16/148 (10%)
 Frame = -3

Query: 495  WHSSRTLLPVLNVDGSSLGNPSPVGFGGLLQIGEGEWIFGFYGSIGTSE-NLQAEL---- 331
            W++S     +LNVDGS LG P   GFGG+++   G ++  F G I  S   L AEL    
Sbjct: 1091 WNNSNQSCIILNVDGSCLGTPIRAGFGGIIRNNAGLFLKAFSGFIQDSTCILHAELTAIF 1150

Query: 330  -----------HRLVCYSDSKSAIELSKAHVSATHAYAALILKTNDLLQREWEIELIHTL 184
                         L C+SDS+ AI L  A +   HAYA LI    ++L       ++HTL
Sbjct: 1151 HGLTLAASMGIEELACFSDSQIAISLITAAIPRFHAYAVLIQDIKEILASN-NFTILHTL 1209

Query: 183  REGNGSADVLAKLGASQQDKMKILPSPP 100
            REGN  AD +AKLGAS  ++     +PP
Sbjct: 1210 REGNHCADFMAKLGASSTEEFTEHHNPP 1237


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