BLASTX nr result

ID: Glycyrrhiza24_contig00019432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019432
         (1273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546242.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   707   0.0  
ref|XP_003535051.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 hom...   697   0.0  
ref|XP_002515824.1| Protein SEY1, putative [Ricinus communis] gi...   628   e-178
ref|NP_199329.1| Root hair defective 3 GTP-binding protein (RHD3...   619   e-175
ref|XP_002865275.1| root hair defective 3 GTP-binding family pro...   610   e-172

>ref|XP_003546242.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 2-like [Glycine max]
          Length = 829

 Score =  707 bits (1826), Expect = 0.0
 Identities = 352/387 (90%), Positives = 368/387 (95%)
 Frame = +2

Query: 110  SDDDCRATQLIAGDGVFNASGLDNFIKSTNLTACGLSYAVVAIMGPQSSGKSTLMNHLFR 289
            ++DDC ATQLI GDG FN +GLDNFI++ NL +CGLSYAVVAIMGPQSSGKSTLMNHLF 
Sbjct: 2    ANDDCCATQLIDGDGEFNVAGLDNFIRTVNLASCGLSYAVVAIMGPQSSGKSTLMNHLFH 61

Query: 290  TSFREMDAFRGRFQTTKGIWIAKCVGIEPFTIAMDLEGTDGRERGEDDTAFEKQSALFAL 469
            TSFREMDAFRGR QTTKGIWIAKCVGIEP TIAMDLEGTDGRERGEDDTAFEKQSALFAL
Sbjct: 62   TSFREMDAFRGRSQTTKGIWIAKCVGIEPSTIAMDLEGTDGRERGEDDTAFEKQSALFAL 121

Query: 470  AISDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTKTPIEHLE 649
            AISDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTKTP+E+LE
Sbjct: 122  AISDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTKTPLENLE 181

Query: 650  PILREDIQKIWDAVPKPQAHKHTPLSEFFNVEVTALSSYEDKEDKFKEEVAQLRQRFFHS 829
            PILREDIQKIWD V KPQAH HTPLSEFFNVEVTALSSYEDKEDKFKEEVAQLRQRFFHS
Sbjct: 182  PILREDIQKIWDGVRKPQAHLHTPLSEFFNVEVTALSSYEDKEDKFKEEVAQLRQRFFHS 241

Query: 830  VAPGGLAGDRRGVVPASALSISAQQIWKIIRENKDLDLPAHKVMVATVRCEEIANEKLSH 1009
            +APGGLAGDRRGVVPASA SISAQQIWK+IRENKDLDLPAHKVMVATVRCEEIANEKL+ 
Sbjct: 242  IAPGGLAGDRRGVVPASAFSISAQQIWKVIRENKDLDLPAHKVMVATVRCEEIANEKLNR 301

Query: 1010 LRSDKGWLELEEAVQSGPVRGFGEKLSSIIDAYLSQYDEEAIFFEEAVRNAKRKQLESNT 1189
            LRSDKGWLELEEA++ GPVRGFGEKLSSIIDA LSQYDEEAIFF+EAVRNAKRKQLES  
Sbjct: 302  LRSDKGWLELEEAIELGPVRGFGEKLSSIIDACLSQYDEEAIFFDEAVRNAKRKQLESKA 361

Query: 1190 LDFVYPAYTTMLGHLRSKALDDFKTKL 1270
            LD VYPAYTT+LGH+RSKALDDFKTKL
Sbjct: 362  LDLVYPAYTTLLGHIRSKALDDFKTKL 388


>ref|XP_003535051.1| PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 2-like [Glycine max]
          Length = 829

 Score =  697 bits (1798), Expect = 0.0
 Identities = 345/387 (89%), Positives = 366/387 (94%)
 Frame = +2

Query: 110  SDDDCRATQLIAGDGVFNASGLDNFIKSTNLTACGLSYAVVAIMGPQSSGKSTLMNHLFR 289
            ++DDC ATQLI G   FN +GLD+FI++ NL +CGLSYAVVAIMGPQSSGKSTLMNHLF 
Sbjct: 2    ANDDCCATQLIDGHAEFNVAGLDSFIRTVNLASCGLSYAVVAIMGPQSSGKSTLMNHLFH 61

Query: 290  TSFREMDAFRGRFQTTKGIWIAKCVGIEPFTIAMDLEGTDGRERGEDDTAFEKQSALFAL 469
            TSFREMDAFRGR QTTKGIWIAKCVGIEP TIAMDLEGTDGRERGEDDTAFEKQSALFAL
Sbjct: 62   TSFREMDAFRGRSQTTKGIWIAKCVGIEPSTIAMDLEGTDGRERGEDDTAFEKQSALFAL 121

Query: 470  AISDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTKTPIEHLE 649
            AISDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTKTP+E+LE
Sbjct: 122  AISDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTKTPLENLE 181

Query: 650  PILREDIQKIWDAVPKPQAHKHTPLSEFFNVEVTALSSYEDKEDKFKEEVAQLRQRFFHS 829
            PILREDIQKIWD + KP+AH+HTPL EFFNVEVTALSSYEDKEDKFKEEVAQLRQRFFHS
Sbjct: 182  PILREDIQKIWDGIRKPEAHQHTPLCEFFNVEVTALSSYEDKEDKFKEEVAQLRQRFFHS 241

Query: 830  VAPGGLAGDRRGVVPASALSISAQQIWKIIRENKDLDLPAHKVMVATVRCEEIANEKLSH 1009
            +APGGLAGDRRGVVPASA SISAQQIWK+IRENKDLDLPAHKVMVATVRCEEIANEKL+ 
Sbjct: 242  IAPGGLAGDRRGVVPASAFSISAQQIWKVIRENKDLDLPAHKVMVATVRCEEIANEKLNQ 301

Query: 1010 LRSDKGWLELEEAVQSGPVRGFGEKLSSIIDAYLSQYDEEAIFFEEAVRNAKRKQLESNT 1189
            LRSDKGWLELEEA++ GPVRGFGEKLSSIIDA LSQYDEEAIFF+EAVRNAK+KQLES  
Sbjct: 302  LRSDKGWLELEEAIELGPVRGFGEKLSSIIDACLSQYDEEAIFFDEAVRNAKQKQLESKA 361

Query: 1190 LDFVYPAYTTMLGHLRSKALDDFKTKL 1270
            LD VYPAYTT+LGH+RSKALDDFKTKL
Sbjct: 362  LDLVYPAYTTLLGHIRSKALDDFKTKL 388


>ref|XP_002515824.1| Protein SEY1, putative [Ricinus communis] gi|223545053|gb|EEF46566.1|
            Protein SEY1, putative [Ricinus communis]
          Length = 779

 Score =  628 bits (1620), Expect = e-178
 Identities = 305/385 (79%), Positives = 351/385 (91%)
 Frame = +2

Query: 116  DDCRATQLIAGDGVFNASGLDNFIKSTNLTACGLSYAVVAIMGPQSSGKSTLMNHLFRTS 295
            ++C +TQLI G+GVFN  GLDNF+++T L+ CGLSYAVV+IMGPQSSGKSTL+NHLF T+
Sbjct: 3    EECCSTQLIDGNGVFNVVGLDNFVRTTKLSDCGLSYAVVSIMGPQSSGKSTLLNHLFYTN 62

Query: 296  FREMDAFRGRFQTTKGIWIAKCVGIEPFTIAMDLEGTDGRERGEDDTAFEKQSALFALAI 475
            FREM+A+ GR QTTKGIWIA+C GIEPFTIAMDLEGTDGRERGEDDTAFEKQSALFALAI
Sbjct: 63   FREMNAYTGRSQTTKGIWIARCAGIEPFTIAMDLEGTDGRERGEDDTAFEKQSALFALAI 122

Query: 476  SDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTKTPIEHLEPI 655
            +DIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTKTP+E+LEP+
Sbjct: 123  ADIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTKTPLEYLEPV 182

Query: 656  LREDIQKIWDAVPKPQAHKHTPLSEFFNVEVTALSSYEDKEDKFKEEVAQLRQRFFHSVA 835
            LREDIQKIW  V KP+AHK+TPLS+FFNVEV AL SYE+KE++FKE+VAQLRQRFFHS++
Sbjct: 183  LREDIQKIWHTVAKPEAHKYTPLSDFFNVEVIALPSYEEKEEQFKEQVAQLRQRFFHSIS 242

Query: 836  PGGLAGDRRGVVPASALSISAQQIWKIIRENKDLDLPAHKVMVATVRCEEIANEKLSHLR 1015
            PGGLAGDRRGVVPAS  S SAQQIWKII++NKDLDLPAHKVMVATVRCEEIANEKL+ L 
Sbjct: 243  PGGLAGDRRGVVPASGFSFSAQQIWKIIKDNKDLDLPAHKVMVATVRCEEIANEKLNCLI 302

Query: 1016 SDKGWLELEEAVQSGPVRGFGEKLSSIIDAYLSQYDEEAIFFEEAVRNAKRKQLESNTLD 1195
            SD+ WL L EAVQ+G V GFG+KLS+I++ YLS+YD EAI+F+E VRNAKRKQLE+  L+
Sbjct: 303  SDEDWLALVEAVQAGTVPGFGKKLSTILETYLSEYDMEAIYFDEGVRNAKRKQLETKALE 362

Query: 1196 FVYPAYTTMLGHLRSKALDDFKTKL 1270
             V+PAY ++LGHLRSK L++FKT L
Sbjct: 363  LVHPAYISILGHLRSKTLENFKTSL 387


>ref|NP_199329.1| Root hair defective 3 GTP-binding protein (RHD3) [Arabidopsis
            thaliana] gi|75171237|sp|Q9FKE9.1|RD3H2_ARATH RecName:
            Full=Protein ROOT HAIR DEFECTIVE 3 homolog 2; AltName:
            Full=Protein SEY1 homolog 3 gi|9759601|dbj|BAB11389.1|
            GTP-binding protein-like; root hair defective 3
            protein-like [Arabidopsis thaliana]
            gi|332007828|gb|AED95211.1| Root hair defective 3
            GTP-binding protein (RHD3) [Arabidopsis thaliana]
          Length = 834

 Score =  619 bits (1597), Expect = e-175
 Identities = 301/389 (77%), Positives = 344/389 (88%)
 Frame = +2

Query: 104  MGSDDDCRATQLIAGDGVFNASGLDNFIKSTNLTACGLSYAVVAIMGPQSSGKSTLMNHL 283
            MG +DD  +TQLI G+G FN  GLDNF+K T L+ CGLSYAVVAIMGPQSSGKSTL+NHL
Sbjct: 1    MGENDDGCSTQLIDGNGEFNVKGLDNFVKKTKLSDCGLSYAVVAIMGPQSSGKSTLLNHL 60

Query: 284  FRTSFREMDAFRGRFQTTKGIWIAKCVGIEPFTIAMDLEGTDGRERGEDDTAFEKQSALF 463
            F+TSFREMDAF GR QTTKGIW+A+CVGIEPFTIAMDLEGTDGRERGEDDT FEKQSALF
Sbjct: 61   FKTSFREMDAFAGRSQTTKGIWMARCVGIEPFTIAMDLEGTDGRERGEDDTTFEKQSALF 120

Query: 464  ALAISDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTKTPIEH 643
            A+A++DIVLINMWCHDIGREQAANKPLLKTVFQVM+RLFSPRKTTLLFVIRDKTKTPIE 
Sbjct: 121  AIAVADIVLINMWCHDIGREQAANKPLLKTVFQVMLRLFSPRKTTLLFVIRDKTKTPIEL 180

Query: 644  LEPILREDIQKIWDAVPKPQAHKHTPLSEFFNVEVTALSSYEDKEDKFKEEVAQLRQRFF 823
            LE  LREDIQKIWD+V KP+AHK+TPL+EFFNV + ALSSYE+KE +F++EVA+LRQRFF
Sbjct: 181  LERALREDIQKIWDSVRKPEAHKNTPLNEFFNVMIVALSSYEEKEKQFEQEVAELRQRFF 240

Query: 824  HSVAPGGLAGDRRGVVPASALSISAQQIWKIIRENKDLDLPAHKVMVATVRCEEIANEKL 1003
            HS++PGGLAGDRRGVVPAS  S S+QQIWK+I+EN+DLDLPAHKVMVATVRCEEIANEKL
Sbjct: 241  HSISPGGLAGDRRGVVPASGFSFSSQQIWKVIKENRDLDLPAHKVMVATVRCEEIANEKL 300

Query: 1004 SHLRSDKGWLELEEAVQSGPVRGFGEKLSSIIDAYLSQYDEEAIFFEEAVRNAKRKQLES 1183
              L +++ WLEL EA + G V GFG+KLSSI++ Y S+YD EAI+F+E VR  KR QL+ 
Sbjct: 301  RDLATNESWLELHEAAEGGLVPGFGKKLSSILEKYFSEYDAEAIYFDEGVRKEKRLQLKL 360

Query: 1184 NTLDFVYPAYTTMLGHLRSKALDDFKTKL 1270
            N LDFVYP+Y TMLGHLRS AL+ FK +L
Sbjct: 361  NALDFVYPSYATMLGHLRSNALESFKIRL 389


>ref|XP_002865275.1| root hair defective 3 GTP-binding family protein [Arabidopsis lyrata
            subsp. lyrata] gi|297311110|gb|EFH41534.1| root hair
            defective 3 GTP-binding family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 833

 Score =  610 bits (1574), Expect = e-172
 Identities = 298/389 (76%), Positives = 341/389 (87%)
 Frame = +2

Query: 104  MGSDDDCRATQLIAGDGVFNASGLDNFIKSTNLTACGLSYAVVAIMGPQSSGKSTLMNHL 283
            MG +DD  +TQLI G+G FN  GLDNF+K T L+ CGLSYAVVAIMGPQSSGKSTL+NHL
Sbjct: 1    MGENDDGCSTQLIDGNGEFNVKGLDNFVKKTKLSDCGLSYAVVAIMGPQSSGKSTLLNHL 60

Query: 284  FRTSFREMDAFRGRFQTTKGIWIAKCVGIEPFTIAMDLEGTDGRERGEDDTAFEKQSALF 463
            F+TSFREMDAF GR QTTKGIW+A+CVGIEPFTIAMDLEGTDGRERGEDDT FE+QSALF
Sbjct: 61   FKTSFREMDAFAGRSQTTKGIWMARCVGIEPFTIAMDLEGTDGRERGEDDTTFERQSALF 120

Query: 464  ALAISDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTKTPIEH 643
            A+A++DIVLINMWCHDIGREQAANKPLLKTVFQVM+RLFSPRKTTLLFVIRDKTKTPIE 
Sbjct: 121  AIAVADIVLINMWCHDIGREQAANKPLLKTVFQVMLRLFSPRKTTLLFVIRDKTKTPIEL 180

Query: 644  LEPILREDIQKIWDAVPKPQAHKHTPLSEFFNVEVTALSSYEDKEDKFKEEVAQLRQRFF 823
            LE  LREDIQKIWD V KP+AHK+TPL+EFFNV + ALSSYE+KE +FK+EVA+LRQRFF
Sbjct: 181  LERALREDIQKIWDLVRKPEAHKNTPLNEFFNVMIVALSSYEEKEKQFKQEVAELRQRFF 240

Query: 824  HSVAPGGLAGDRRGVVPASALSISAQQIWKIIRENKDLDLPAHKVMVATVRCEEIANEKL 1003
            HS++PGGLAGDRRGVVPAS  S S+QQIW++I+EN+DLDLPAHKVMVATVRCEEIANEKL
Sbjct: 241  HSISPGGLAGDRRGVVPASGFSFSSQQIWRVIKENRDLDLPAHKVMVATVRCEEIANEKL 300

Query: 1004 SHLRSDKGWLELEEAVQSGPVRGFGEKLSSIIDAYLSQYDEEAIFFEEAVRNAKRKQLES 1183
              L +++ WLEL EAV+ G V GFG+KLSSI++ Y S+YD EAI+F+E VR  KR QL+ 
Sbjct: 301  RDLATNESWLELHEAVEGGLVPGFGKKLSSILEKYFSEYDAEAIYFDEGVRKEKRLQLKL 360

Query: 1184 NTLDFVYPAYTTMLGHLRSKALDDFKTKL 1270
              LD V+ AY TMLGHLRS AL+ FK +L
Sbjct: 361  KALDLVHTAYATMLGHLRSNALESFKIQL 389


Top