BLASTX nr result
ID: Glycyrrhiza24_contig00019429
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00019429
(934 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containi... 478 e-132
ref|XP_003630734.1| Pentatricopeptide repeat-containing protein ... 476 e-132
ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containi... 474 e-131
ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containi... 391 e-106
emb|CBI36294.3| unnamed protein product [Vitis vinifera] 391 e-106
>ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 478 bits (1229), Expect = e-132
Identities = 233/279 (83%), Positives = 245/279 (87%)
Frame = -1
Query: 934 QGCPVDLLAYNNFLEALCKGGHVDEATKNFHDMLSKRVEPDAFTYSIFIRTYCDANDMHS 755
QGCPVDLLAYNN L+ALCKGG VDEA FHDMLSKRVEPDAFTYSIFI +YCDA+D+ S
Sbjct: 245 QGCPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQS 304
Query: 754 AFRVLDKMRRCNLLPNVFTYNCIIKRLCKNEKVEEAYQLLDEMISGGVKPDTWSYNAIQA 575
AFRVLDKMRR NLLPNVFTYNCIIK+LCKNE VEEAYQLLDEMIS GVKPDTWSYNAIQA
Sbjct: 305 AFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEHVEEAYQLLDEMISRGVKPDTWSYNAIQA 364
Query: 574 YHCDHCEVNRALRLMSRMEKDNCLPDRHTYNMVLKLLIRIGRFDKATEVWENMGDKKFYP 395
YHCDHCEVNRALRLM RMEKD CLPDRHTYNMVLKLLIRIGRFDK TEVWENM DKKFYP
Sbjct: 365 YHCDHCEVNRALRLMFRMEKDICLPDRHTYNMVLKLLIRIGRFDKVTEVWENMVDKKFYP 424
Query: 394 SVSTYSVMIHDLCKKKGKLEEACKYFEMMVDEGIPPYVTTIEXXXXXXXXXXXLDHIEIL 215
SVSTYSVMIH CKKKGKLEEACKYFEMM+DEGIPPYVTT+E +DHIEIL
Sbjct: 425 SVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVEMLRNRLLGLGFIDHIEIL 484
Query: 214 ADKMRQSTSCSIQELANVMIGVRVAHSTLRHDDSDIESD 98
A KMRQSTS +IQELAN+MIG R AH+TL D+ DIESD
Sbjct: 485 AAKMRQSTSYAIQELANIMIGNRTAHNTLGRDEMDIESD 523
Score = 61.2 bits (147), Expect = 3e-07
Identities = 40/159 (25%), Positives = 72/159 (45%)
Frame = -1
Query: 832 SKRVEPDAFTYSIFIRTYCDANDMHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNEKVE 653
S E ++ + + R Y AN A R ++M + P + + ++ LCK + V+
Sbjct: 140 SHHYEINSEIFWLIFRAYSQANLPDGAIRSFNRMDEFGVKPTIHDLDKLLFILCKRKHVK 199
Query: 652 EAYQLLDEMISGGVKPDTWSYNAIQAYHCDHCEVNRALRLMSRMEKDNCLPDRHTYNMVL 473
+A QL + +Y+ + + + + +A L M + C D YN +L
Sbjct: 200 QAQQLFHQA-KNRFSLTAKTYSILISGWGEIGDSEKACDLFQAMLEQGCPVDLLAYNNLL 258
Query: 472 KLLIRIGRFDKATEVWENMGDKKFYPSVSTYSVMIHDLC 356
+ L + GR D+A ++ +M K+ P TYS+ IH C
Sbjct: 259 QALCKGGRVDEAKNIFHDMLSKRVEPDAFTYSIFIHSYC 297
>ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524756|gb|AET05210.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 520
Score = 476 bits (1224), Expect = e-132
Identities = 233/279 (83%), Positives = 247/279 (88%)
Frame = -1
Query: 934 QGCPVDLLAYNNFLEALCKGGHVDEATKNFHDMLSKRVEPDAFTYSIFIRTYCDANDMHS 755
QGC VDLLAYNN LEALCKGGHVDEA +DMLSK+VEPDAFTYSIFIR+YCDAN++HS
Sbjct: 242 QGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSKKVEPDAFTYSIFIRSYCDANNVHS 301
Query: 754 AFRVLDKMRRCNLLPNVFTYNCIIKRLCKNEKVEEAYQLLDEMISGGVKPDTWSYNAIQA 575
AF VLDKMRRCNLLPNVFTYNCIIKRLCK +KVEEAYQLLDEMIS G+KPDTWSYNAIQA
Sbjct: 302 AFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEMISSGLKPDTWSYNAIQA 361
Query: 574 YHCDHCEVNRALRLMSRMEKDNCLPDRHTYNMVLKLLIRIGRFDKATEVWENMGDKKFYP 395
YHCDHCEVNRAL+L+SRMEKD C PDRHTYNMVLKLLIRIGRFDKATEVWE MGDKKFYP
Sbjct: 362 YHCDHCEVNRALKLISRMEKDVCFPDRHTYNMVLKLLIRIGRFDKATEVWECMGDKKFYP 421
Query: 394 SVSTYSVMIHDLCKKKGKLEEACKYFEMMVDEGIPPYVTTIEXXXXXXXXXXXLDHIEIL 215
SVSTYSVMIH LCKKKGKLEEACKYF MM+DEGIPPY TTIE LD+IEIL
Sbjct: 422 SVSTYSVMIHGLCKKKGKLEEACKYFAMMIDEGIPPYDTTIEMLRNRLLGLGLLDNIEIL 481
Query: 214 ADKMRQSTSCSIQELANVMIGVRVAHSTLRHDDSDIESD 98
A KMRQSTSCSIQELAN+MIG R A +T R D+SDIESD
Sbjct: 482 AAKMRQSTSCSIQELANIMIGARSAQNTWRRDESDIESD 520
>ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 474 bits (1219), Expect = e-131
Identities = 230/279 (82%), Positives = 244/279 (87%)
Frame = -1
Query: 934 QGCPVDLLAYNNFLEALCKGGHVDEATKNFHDMLSKRVEPDAFTYSIFIRTYCDANDMHS 755
QGCPVDLLAYNN L+ALCKGG VDEA FHDMLSKRVEPDAFTYSIFI +YCDA+D+ S
Sbjct: 245 QGCPVDLLAYNNLLQALCKGGCVDEAKTIFHDMLSKRVEPDAFTYSIFIHSYCDADDVQS 304
Query: 754 AFRVLDKMRRCNLLPNVFTYNCIIKRLCKNEKVEEAYQLLDEMISGGVKPDTWSYNAIQA 575
A RVLDKMRR N+LPNVFTYNCIIKRLCKNE VEEAY LLDEMIS GV+PDTWSYNAIQA
Sbjct: 305 ALRVLDKMRRYNILPNVFTYNCIIKRLCKNEHVEEAYLLLDEMISRGVRPDTWSYNAIQA 364
Query: 574 YHCDHCEVNRALRLMSRMEKDNCLPDRHTYNMVLKLLIRIGRFDKATEVWENMGDKKFYP 395
YHCDHCEVNRA+RLM RMEKDNCLPDRHTYNMVLKLLIRIGRFDK T+VW NMGDKKFYP
Sbjct: 365 YHCDHCEVNRAIRLMFRMEKDNCLPDRHTYNMVLKLLIRIGRFDKVTKVWGNMGDKKFYP 424
Query: 394 SVSTYSVMIHDLCKKKGKLEEACKYFEMMVDEGIPPYVTTIEXXXXXXXXXXXLDHIEIL 215
SVSTYSVMIH CKKKGKLEEACKYFEMM+DEGIPPYVTT+E LDHIEIL
Sbjct: 425 SVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVEMLRNQLLGLGFLDHIEIL 484
Query: 214 ADKMRQSTSCSIQELANVMIGVRVAHSTLRHDDSDIESD 98
A KMRQSTS +IQELAN+MIG R H+TLR D+ DIESD
Sbjct: 485 AAKMRQSTSYAIQELANIMIGNRTTHNTLRRDEMDIESD 523
Score = 62.4 bits (150), Expect = 1e-07
Identities = 47/198 (23%), Positives = 84/198 (42%)
Frame = -1
Query: 796 IFIRTYCDANDMHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNEKVEEAYQLLDEMISG 617
+ R Y AN A R ++M + P + ++ ++ LCK + V++A Q D+
Sbjct: 152 LIFRAYSQANLPDGAIRSFNRMDEFGIKPTINDFDKLLFILCKTKHVKQAQQFFDQ-AKN 210
Query: 616 GVKPDTWSYNAIQAYHCDHCEVNRALRLMSRMEKDNCLPDRHTYNMVLKLLIRIGRFDKA 437
+Y+ + + D + +A L M + C D YN +L+ L + G D+A
Sbjct: 211 RFLLTAKTYSILISGWGDIGDSEKAHELFQAMLEQGCPVDLLAYNNLLQALCKGGCVDEA 270
Query: 436 TEVWENMGDKKFYPSVSTYSVMIHDLCKKKGKLEEACKYFEMMVDEGIPPYVTTIEXXXX 257
++ +M K+ P TYS+ IH C ++ A + + M I P V T
Sbjct: 271 KTIFHDMLSKRVEPDAFTYSIFIHSYC-DADDVQSALRVLDKMRRYNILPNVFTYNCIIK 329
Query: 256 XXXXXXXLDHIEILADKM 203
++ +L D+M
Sbjct: 330 RLCKNEHVEEAYLLLDEM 347
>ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 391 bits (1005), Expect = e-106
Identities = 181/281 (64%), Positives = 228/281 (81%)
Frame = -1
Query: 934 QGCPVDLLAYNNFLEALCKGGHVDEATKNFHDMLSKRVEPDAFTYSIFIRTYCDANDMHS 755
+GC VD++AYN+ LEALCKGG+VDEA K F +M S + PDA +YSIFIR YC+ ND+HS
Sbjct: 248 RGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHS 307
Query: 754 AFRVLDKMRRCNLLPNVFTYNCIIKRLCKNEKVEEAYQLLDEMISGGVKPDTWSYNAIQA 575
AF+VLD+MRR NL+PNVFTYNCI+K+LCK+EKV+EAYQLLDEMI GV PD WSYNAIQA
Sbjct: 308 AFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQA 367
Query: 574 YHCDHCEVNRALRLMSRMEKDNCLPDRHTYNMVLKLLIRIGRFDKATEVWENMGDKKFYP 395
+HCDHCEVN+ALRL+SRMEK+NC+PDRHTYNMVLK+L+R+GRFD+ T+VW M ++ FYP
Sbjct: 368 FHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFYP 427
Query: 394 SVSTYSVMIHDLCKKKGKLEEACKYFEMMVDEGIPPYVTTIEXXXXXXXXXXXLDHIEIL 215
+ STY+VM+H CKKKGKLEEACKYFEMM+D+GIPPY T+E + I++L
Sbjct: 428 AASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVELLRNRVIGLGFSEQIDVL 487
Query: 214 ADKMRQSTSCSIQELANVMIGVRVAHSTLRHDDSDIESD*R 92
A KM +STSC IQEL++VM G + A LR ++ ++ S+ R
Sbjct: 488 AGKMERSTSCVIQELSSVMRGEK-ASGRLRSEEQNLPSEER 527
Score = 109 bits (272), Expect = 1e-21
Identities = 57/178 (32%), Positives = 102/178 (57%)
Frame = -1
Query: 904 NNFLEALCKGGHVDEATKNFHDMLSKRVEPDAFTYSIFIRTYCDANDMHSAFRVLDKMRR 725
+ L LCK HV +A + F D ++ V P+A TYSI +R + D D A ++ ++MR
Sbjct: 189 DQLLYVLCKRKHVKQA-QEFFDKVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRE 247
Query: 724 CNLLPNVFTYNCIIKRLCKNEKVEEAYQLLDEMISGGVKPDTWSYNAIQAYHCDHCEVNR 545
+V YN +++ LCK V+EAY+L EM S G+ PD SY+ +C+ +++
Sbjct: 248 RGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHS 307
Query: 544 ALRLMSRMEKDNCLPDRHTYNMVLKLLIRIGRFDKATEVWENMGDKKFYPSVSTYSVM 371
A +++ RM + N +P+ TYN ++K L + + D+A ++ + M ++ P + +Y+ +
Sbjct: 308 AFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAI 365
Score = 63.5 bits (153), Expect = 7e-08
Identities = 47/198 (23%), Positives = 84/198 (42%)
Frame = -1
Query: 796 IFIRTYCDANDMHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNEKVEEAYQLLDEMISG 617
+ R YC AN A R +M + V + ++ LCK + V++A + D+ ++
Sbjct: 155 LIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDK-VNV 213
Query: 616 GVKPDTWSYNAIQAYHCDHCEVNRALRLMSRMEKDNCLPDRHTYNMVLKLLIRIGRFDKA 437
V P+ +Y+ + D + + A +L M + C D YN +L+ L + G D+A
Sbjct: 214 EVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEA 273
Query: 436 TEVWENMGDKKFYPSVSTYSVMIHDLCKKKGKLEEACKYFEMMVDEGIPPYVTTIEXXXX 257
+++ MG P +YS+ I C + + A + + M + P V T
Sbjct: 274 YKLFREMGSNGLAPDACSYSIFIRAYC-EVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVK 332
Query: 256 XXXXXXXLDHIEILADKM 203
+D L D+M
Sbjct: 333 KLCKSEKVDEAYQLLDEM 350
>emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 391 bits (1005), Expect = e-106
Identities = 181/281 (64%), Positives = 228/281 (81%)
Frame = -1
Query: 934 QGCPVDLLAYNNFLEALCKGGHVDEATKNFHDMLSKRVEPDAFTYSIFIRTYCDANDMHS 755
+GC VD++AYN+ LEALCKGG+VDEA K F +M S + PDA +YSIFIR YC+ ND+HS
Sbjct: 221 RGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHS 280
Query: 754 AFRVLDKMRRCNLLPNVFTYNCIIKRLCKNEKVEEAYQLLDEMISGGVKPDTWSYNAIQA 575
AF+VLD+MRR NL+PNVFTYNCI+K+LCK+EKV+EAYQLLDEMI GV PD WSYNAIQA
Sbjct: 281 AFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQA 340
Query: 574 YHCDHCEVNRALRLMSRMEKDNCLPDRHTYNMVLKLLIRIGRFDKATEVWENMGDKKFYP 395
+HCDHCEVN+ALRL+SRMEK+NC+PDRHTYNMVLK+L+R+GRFD+ T+VW M ++ FYP
Sbjct: 341 FHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFYP 400
Query: 394 SVSTYSVMIHDLCKKKGKLEEACKYFEMMVDEGIPPYVTTIEXXXXXXXXXXXLDHIEIL 215
+ STY+VM+H CKKKGKLEEACKYFEMM+D+GIPPY T+E + I++L
Sbjct: 401 AASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVELLRNRVIGLGFSEQIDVL 460
Query: 214 ADKMRQSTSCSIQELANVMIGVRVAHSTLRHDDSDIESD*R 92
A KM +STSC IQEL++VM G + A LR ++ ++ S+ R
Sbjct: 461 AGKMERSTSCVIQELSSVMRGEK-ASGRLRSEEQNLPSEER 500
Score = 109 bits (272), Expect = 1e-21
Identities = 57/178 (32%), Positives = 102/178 (57%)
Frame = -1
Query: 904 NNFLEALCKGGHVDEATKNFHDMLSKRVEPDAFTYSIFIRTYCDANDMHSAFRVLDKMRR 725
+ L LCK HV +A + F D ++ V P+A TYSI +R + D D A ++ ++MR
Sbjct: 162 DQLLYVLCKRKHVKQA-QEFFDKVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRE 220
Query: 724 CNLLPNVFTYNCIIKRLCKNEKVEEAYQLLDEMISGGVKPDTWSYNAIQAYHCDHCEVNR 545
+V YN +++ LCK V+EAY+L EM S G+ PD SY+ +C+ +++
Sbjct: 221 RGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHS 280
Query: 544 ALRLMSRMEKDNCLPDRHTYNMVLKLLIRIGRFDKATEVWENMGDKKFYPSVSTYSVM 371
A +++ RM + N +P+ TYN ++K L + + D+A ++ + M ++ P + +Y+ +
Sbjct: 281 AFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAI 338
Score = 63.5 bits (153), Expect = 7e-08
Identities = 47/198 (23%), Positives = 84/198 (42%)
Frame = -1
Query: 796 IFIRTYCDANDMHSAFRVLDKMRRCNLLPNVFTYNCIIKRLCKNEKVEEAYQLLDEMISG 617
+ R YC AN A R +M + V + ++ LCK + V++A + D+ ++
Sbjct: 128 LIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDK-VNV 186
Query: 616 GVKPDTWSYNAIQAYHCDHCEVNRALRLMSRMEKDNCLPDRHTYNMVLKLLIRIGRFDKA 437
V P+ +Y+ + D + + A +L M + C D YN +L+ L + G D+A
Sbjct: 187 EVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEA 246
Query: 436 TEVWENMGDKKFYPSVSTYSVMIHDLCKKKGKLEEACKYFEMMVDEGIPPYVTTIEXXXX 257
+++ MG P +YS+ I C + + A + + M + P V T
Sbjct: 247 YKLFREMGSNGLAPDACSYSIFIRAYC-EVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVK 305
Query: 256 XXXXXXXLDHIEILADKM 203
+D L D+M
Sbjct: 306 KLCKSEKVDEAYQLLDEM 323