BLASTX nr result

ID: Glycyrrhiza24_contig00019410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019410
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631046.1| Poly(A) polymerase [Medicago truncatula] gi|...   191   5e-47
ref|XP_003524351.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) poly...   183   1e-44
ref|XP_003534153.1| PREDICTED: poly(A) polymerase-like [Glycine ...   165   4e-39
ref|XP_003530048.1| PREDICTED: poly(A) polymerase-like [Glycine ...   160   1e-37
ref|XP_003620365.1| Poly(A) polymerase [Medicago truncatula] gi|...   143   2e-32

>ref|XP_003631046.1| Poly(A) polymerase [Medicago truncatula] gi|355525068|gb|AET05522.1|
            Poly(A) polymerase [Medicago truncatula]
          Length = 822

 Score =  191 bits (485), Expect = 5e-47
 Identities = 98/156 (62%), Positives = 119/156 (76%)
 Frame = -3

Query: 470  NSKSFASLPPTSREVHEDRNPVSTASSCDVKCDDAEVNSMGEQKSEKPNLKSSGECSSRD 291
            NS+SF+SLPP+SR+VHED NPVS A+SC VKCDD E+N M EQKSEKP+L  SGEC   D
Sbjct: 577  NSRSFSSLPPSSRDVHEDGNPVSIANSCSVKCDDTELNCMSEQKSEKPDLNFSGECPG-D 635

Query: 290  RETNGSVKSNSQVNPLLTATDTSSYKEAEKLAIEKIMCGPYDGHQAFSXXXXXXXXXXEH 111
            RET+GSVKSNSQ+ PLL ATD S+++EAEK+ I+KI+CGP + HQAF           E+
Sbjct: 636  RETDGSVKSNSQIIPLLAATDRSNFEEAEKVVIQKIVCGPCEVHQAFPEEPDELEDDLEY 695

Query: 110  RNQVKDFGGNVKNSNLDSSNSEFAVAAEPVIATKEN 3
            RN+VKDFGGN+ N N DS+ S   VAAEPV + KEN
Sbjct: 696  RNKVKDFGGNLANINFDSTKS--VVAAEPVFSQKEN 729


>ref|XP_003524351.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Glycine
           max]
          Length = 702

 Score =  183 bits (464), Expect = 1e-44
 Identities = 96/134 (71%), Positives = 104/134 (77%)
 Frame = -3

Query: 470 NSKSFASLPPTSREVHEDRNPVSTASSCDVKCDDAEVNSMGEQKSEKPNLKSSGECSSRD 291
           NSKS ASLPP+SREVHED NP+S ASSC VK +D+E+NS  EQ+SEKP+LKSSGEC   D
Sbjct: 530 NSKSMASLPPSSREVHEDENPISPASSCFVKSNDSEINSTSEQQSEKPDLKSSGECPG-D 588

Query: 290 RETNGSVKSNSQVNPLLTATDTSSYKEAEKLAIEKIMCGPYDGHQAFSXXXXXXXXXXEH 111
           RETNGSV SN QVN  LTATDTSS KEAEKLAIEKIMCGPYD  Q FS          E 
Sbjct: 589 RETNGSVTSNLQVNAALTATDTSSSKEAEKLAIEKIMCGPYDAQQVFSGEPDELEDDLEF 648

Query: 110 RNQVKDFGGNVKNS 69
           RNQVKDFGG +KNS
Sbjct: 649 RNQVKDFGGKMKNS 662


>ref|XP_003534153.1| PREDICTED: poly(A) polymerase-like [Glycine max]
          Length = 757

 Score =  165 bits (417), Expect = 4e-39
 Identities = 90/152 (59%), Positives = 109/152 (71%)
 Frame = -3

Query: 470  NSKSFASLPPTSREVHEDRNPVSTASSCDVKCDDAEVNSMGEQKSEKPNLKSSGECSSRD 291
            NSKS  SL P SREV+ED +P+S +SSC +K D++EVNS+G QKSEKP L S GE  S D
Sbjct: 550  NSKSPVSLAPPSREVNEDISPISASSSCSMKFDESEVNSIGGQKSEKPCLNSPGEIPSGD 609

Query: 290  RETNGSVKSNSQVNPLLTATDTSSYKEAEKLAIEKIMCGPYDGHQAFSXXXXXXXXXXEH 111
              TNGSV +N QVNP+L A DTS+ KE EKLAIEKIM GPYD HQAF           ++
Sbjct: 610  SGTNGSVTNNQQVNPVLAAADTSNSKEEEKLAIEKIMSGPYDAHQAFPEEPEELEDDTQY 669

Query: 110  RNQVKDFGGNVKNSNLDSSNSEFAVAAEPVIA 15
            +NQ KD GGN+KN N++S  S+ AVA EPVI+
Sbjct: 670  KNQDKDSGGNMKN-NMESLLSKPAVAEEPVIS 700


>ref|XP_003530048.1| PREDICTED: poly(A) polymerase-like [Glycine max]
          Length = 757

 Score =  160 bits (405), Expect = 1e-37
 Identities = 88/152 (57%), Positives = 107/152 (70%)
 Frame = -3

Query: 470  NSKSFASLPPTSREVHEDRNPVSTASSCDVKCDDAEVNSMGEQKSEKPNLKSSGECSSRD 291
            NS+S  SLPP SREVHED +P+S +SSC +K D++EVNS+G QKSEK  LKS GE  S D
Sbjct: 550  NSRSPVSLPPPSREVHEDISPISASSSCSMKFDESEVNSIGGQKSEKLCLKSPGEIPSGD 609

Query: 290  RETNGSVKSNSQVNPLLTATDTSSYKEAEKLAIEKIMCGPYDGHQAFSXXXXXXXXXXEH 111
              TNGSV SN QVNP+L A DTS+ KE EKLAIEKIM G YD HQAF           ++
Sbjct: 610  SGTNGSVTSNQQVNPVLAAADTSNSKEEEKLAIEKIMSGLYDAHQAFQEEPKELEDNTQY 669

Query: 110  RNQVKDFGGNVKNSNLDSSNSEFAVAAEPVIA 15
            +NQ KD   N+KN N++S +S+ AV  EPVI+
Sbjct: 670  KNQDKDSSANMKN-NMESLDSKPAVPEEPVIS 700


>ref|XP_003620365.1| Poly(A) polymerase [Medicago truncatula]
           gi|355495380|gb|AES76583.1| Poly(A) polymerase [Medicago
           truncatula]
          Length = 752

 Score =  143 bits (360), Expect = 2e-32
 Identities = 80/151 (52%), Positives = 96/151 (63%)
 Frame = -3

Query: 467 SKSFASLPPTSREVHEDRNPVSTASSCDVKCDDAEVNSMGEQKSEKPNLKSSGECSSRDR 288
           SKS AS+ P +R V EDRNP S  SSC +K DD+EVNSMG+QKSEK  LKS GE  + D 
Sbjct: 549 SKSSASVSPPNRNVPEDRNPFSATSSCSMKFDDSEVNSMGDQKSEKLCLKSVGEIPAGDS 608

Query: 287 ETNGSVKSNSQVNPLLTATDTSSYKEAEKLAIEKIMCGPYDGHQAFSXXXXXXXXXXEHR 108
            TNGS   N Q    L A DTS+ KE E+LAIE IM GPY+ HQA +           +R
Sbjct: 609 VTNGSATDNKQ----LDAPDTSNTKEEERLAIEHIMAGPYEAHQALTEEPDELEQDMGYR 664

Query: 107 NQVKDFGGNVKNSNLDSSNSEFAVAAEPVIA 15
           NQV D GG+VK++N DSSN    V  + VI+
Sbjct: 665 NQVNDNGGSVKSNNFDSSNPNPVVVEDQVIS 695


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