BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019406
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containi...   251   4e-65
ref|XP_003610734.1| Pentatricopeptide repeat-containing protein ...   239   2e-61
ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containi...   219   2e-55
ref|XP_002315764.1| predicted protein [Populus trichocarpa] gi|2...   204   5e-51
ref|XP_002868248.1| pentatricopeptide repeat-containing protein ...   187   1e-45

>ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Glycine max]
          Length = 721

 Score =  251 bits (641), Expect = 4e-65
 Identities = 122/137 (89%), Positives = 130/137 (94%)
 Frame = +1

Query: 1   PHEALTLFNEMQQKGIMPDQITMLSVISACAHVGALVQAKWIHTYADKNGFGRVLSVNNA 180
           P EAL LFNEMQ++ I+PDQITMLSVISACA+VGALVQAKWIHTYADKNGFGR L +NNA
Sbjct: 330 PLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKWIHTYADKNGFGRTLPINNA 389

Query: 181 LIDMYAKCGNLVNAREVFDNMPRKNVISWSSMINAFAMHGDADSAISLFQRMKEENIEPN 360
           LIDMYAKCGNLV AREVF+NMPRKNVISWSSMINAFAMHGDADSAI+LF RMKE+NIEPN
Sbjct: 390 LIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGDADSAIALFHRMKEQNIEPN 449

Query: 361 GVTFIGVLYACSHAGLV 411
           GVTFIGVLYACSHAGLV
Sbjct: 450 GVTFIGVLYACSHAGLV 466



 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 51/162 (31%), Positives = 78/162 (48%), Gaps = 31/162 (19%)
 Frame = +1

Query: 13  LTLFNEMQQKGIMPDQITMLSVISACAHVGALVQAKWIHTYADKNGFGRVLSVNNALIDM 192
           L L+ EM+  G  PD I + +V+SACAH G L   K IH +   NGF     +  +L++M
Sbjct: 202 LKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVGSHIQTSLVNM 261

Query: 193 YAKCGNLVNAREVFDNMP-------------------------------RKNVISWSSMI 279
           YA CG +  AREV+D +P                                K+++ WS+MI
Sbjct: 262 YANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVEKDLVCWSAMI 321

Query: 280 NAFAMHGDADSAISLFQRMKEENIEPNGVTFIGVLYACSHAG 405
           + +A       A+ LF  M+   I P+ +T + V+ AC++ G
Sbjct: 322 SGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACANVG 363



 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 44/136 (32%), Positives = 76/136 (55%), Gaps = 1/136 (0%)
 Frame = +1

Query: 1   PHEALTLFNEMQQKGIMPDQITMLSVISACAHVGALVQAKWIHTYADKNGFGRVLS-VNN 177
           P   L+L+  +++ G   D+ +   ++ A + + AL     IH  A K GF      + +
Sbjct: 96  PENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALNLGLEIHGLASKFGFFHADPFIQS 155

Query: 178 ALIDMYAKCGNLVNAREVFDNMPRKNVISWSSMINAFAMHGDADSAISLFQRMKEENIEP 357
           ALI MYA CG +++AR +FD M  ++V++W+ MI+ ++ +   D  + L++ MK    EP
Sbjct: 156 ALIAMYAACGRIMDARFLFDKMSHRDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEP 215

Query: 358 NGVTFIGVLYACSHAG 405
           + +    VL AC+HAG
Sbjct: 216 DAIILCTVLSACAHAG 231



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/119 (26%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
 Frame = +1

Query: 10  ALTLFNEMQQKGIMPDQITMLSVISACAHVGALVQA-KWIHTYADKNGFGRVLSVNNALI 186
           A+ LF+ M+++ I P+ +T + V+ AC+H G + +  K+  +  +++           ++
Sbjct: 434 AIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREHYGCMV 493

Query: 187 DMYAKCGNLVNAREVFDNMP-RKNVISWSSMINAFAMHGDADSAISLFQRMKEENIEPN 360
           D+Y +  +L  A E+ + MP   NVI W S+++A   HG+ +       R+ E  +EP+
Sbjct: 494 DLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLE--LEPD 550


>ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512069|gb|AES93692.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 726

 Score =  239 bits (609), Expect = 2e-61
 Identities = 116/137 (84%), Positives = 124/137 (90%)
 Frame = +1

Query: 1   PHEALTLFNEMQQKGIMPDQITMLSVISACAHVGALVQAKWIHTYADKNGFGRVLSVNNA 180
           P EAL LF+EM QK  +PDQITMLSVISAC+HVGAL QA WIHTY D++GFGR LSVNNA
Sbjct: 335 PQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRALSVNNA 394

Query: 181 LIDMYAKCGNLVNAREVFDNMPRKNVISWSSMINAFAMHGDADSAISLFQRMKEENIEPN 360
           LIDMYAKCGNLV AREVF+NMPRKNVISWSSMINAFAMHG+ADSAI LF+RMKE NIEPN
Sbjct: 395 LIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPN 454

Query: 361 GVTFIGVLYACSHAGLV 411
           GVTFIGVLYAC HAGLV
Sbjct: 455 GVTFIGVLYACGHAGLV 471



 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 31/164 (18%)
 Frame = +1

Query: 7   EALTLFNEMQQKGIMPDQITMLSVISACAHVGALVQAKWIHTYADKNGFGRVLSVNNALI 186
           +AL LF +M+   + PD + + +V+SAC H G L   + IH +   NG+     +  ALI
Sbjct: 205 DALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALI 264

Query: 187 DMYAKCGNL-------------------------------VNAREVFDNMPRKNVISWSS 273
           +MYA CG +                                +AR +FD M  ++++ WS+
Sbjct: 265 NMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSA 324

Query: 274 MINAFAMHGDADSAISLFQRMKEENIEPNGVTFIGVLYACSHAG 405
           MI+ +A       A+ LF  M ++   P+ +T + V+ ACSH G
Sbjct: 325 MISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVG 368



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/136 (30%), Positives = 72/136 (52%), Gaps = 1/136 (0%)
 Frame = +1

Query: 1   PHEALTLFNEMQQ-KGIMPDQITMLSVISACAHVGALVQAKWIHTYADKNGFGRVLSVNN 177
           P + + L++ ++       D+ +  S++ A + V A      IH  A K GF     +  
Sbjct: 101 PEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQT 160

Query: 178 ALIDMYAKCGNLVNAREVFDNMPRKNVISWSSMINAFAMHGDADSAISLFQRMKEENIEP 357
            LI MYA C  +++AR +FD M   + ++W+ +I+ +  +G  D A+ LF+ M+  +++P
Sbjct: 161 GLIAMYASCRRIMDARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALRLFEDMRSSDMKP 220

Query: 358 NGVTFIGVLYACSHAG 405
           + V    VL AC HAG
Sbjct: 221 DSVILCTVLSACGHAG 236



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 2/119 (1%)
 Frame = +1

Query: 10  ALTLFNEMQQKGIMPDQITMLSVISACAHVGALVQA-KWIHTYADKNGFGRVLSVNNALI 186
           A+ LF  M++  I P+ +T + V+ AC H G + +  K   +  +++G          ++
Sbjct: 439 AIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTREHYGCMV 498

Query: 187 DMYAKCGNLVNAREVFDNMP-RKNVISWSSMINAFAMHGDADSAISLFQRMKEENIEPN 360
           D+Y +   L  A E+ + MP   NVI W S+++A  +HG+A+      +R+ E  +EP+
Sbjct: 499 DLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLE--LEPD 555


>ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera] gi|297737070|emb|CBI26271.3| unnamed
           protein product [Vitis vinifera]
          Length = 727

 Score =  219 bits (557), Expect = 2e-55
 Identities = 101/137 (73%), Positives = 117/137 (85%)
 Frame = +1

Query: 1   PHEALTLFNEMQQKGIMPDQITMLSVISACAHVGALVQAKWIHTYADKNGFGRVLSVNNA 180
           P EAL LFNEMQ  GI PDQ+TMLSVI+ACAH+GAL QAKWIH + DKNGFG  L +NNA
Sbjct: 336 PQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNA 395

Query: 181 LIDMYAKCGNLVNAREVFDNMPRKNVISWSSMINAFAMHGDADSAISLFQRMKEENIEPN 360
           LI+MYAKCG+L  AR +FD MPRKNVISW+ MI+AFAMHGDA SA+  F +M++ENIEPN
Sbjct: 396 LIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPN 455

Query: 361 GVTFIGVLYACSHAGLV 411
           G+TF+GVLYACSHAGLV
Sbjct: 456 GITFVGVLYACSHAGLV 472



 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 47/135 (34%), Positives = 75/135 (55%)
 Frame = +1

Query: 1   PHEALTLFNEMQQKGIMPDQITMLSVISACAHVGALVQAKWIHTYADKNGFGRVLSVNNA 180
           P + L ++  M+ +G+  D+ +   ++ A + V +LV+   IH  A K GF     V   
Sbjct: 103 PEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTG 162

Query: 181 LIDMYAKCGNLVNAREVFDNMPRKNVISWSSMINAFAMHGDADSAISLFQRMKEENIEPN 360
           L+ MYA CG +  AR +FD M  ++V++WS MI+ +   G  + A+ LF+ MK  N+EP+
Sbjct: 163 LVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKNYNVEPD 222

Query: 361 GVTFIGVLYACSHAG 405
            +    VL AC  AG
Sbjct: 223 EMMLSTVLSACGRAG 237



 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 53/165 (32%), Positives = 83/165 (50%), Gaps = 31/165 (18%)
 Frame = +1

Query: 4   HEALTLFNEMQQKGIMPDQITMLSVISACAHVGALVQAKWIHTYADKNGFGRVLSVNNAL 183
           ++AL LF EM+   + PD++ + +V+SAC   G L   K IH +  +N       + +AL
Sbjct: 205 NDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSAL 264

Query: 184 IDMYAKCG---------------NLV----------------NAREVFDNMPRKNVISWS 270
           + MYA CG               NLV                NAR VF+ M +K+++ WS
Sbjct: 265 VTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWS 324

Query: 271 SMINAFAMHGDADSAISLFQRMKEENIEPNGVTFIGVLYACSHAG 405
           +MI+ +A       A++LF  M+   I+P+ VT + V+ AC+H G
Sbjct: 325 AMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLG 369



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 34/130 (26%), Positives = 69/130 (53%), Gaps = 3/130 (2%)
 Frame = +1

Query: 10  ALTLFNEMQQKGIMPDQITMLSVISACAHVGALVQAKWI-HTYADKNGFGRVLSVNNALI 186
           AL  F++M+ + I P+ IT + V+ AC+H G + + + I ++  +++           ++
Sbjct: 440 ALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMV 499

Query: 187 DMYAKCGNLVNAREVFDNMP-RKNVISWSSMINAFAMHGDADSAISLFQRMKEENIEPNG 363
           D++ +   L  A E+ + MP   NVI W S++ A  +HG+ +      +R+ E + + +G
Sbjct: 500 DLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLELDPDHDG 559

Query: 364 V-TFIGVLYA 390
              F+  +YA
Sbjct: 560 AHVFLSNIYA 569


>ref|XP_002315764.1| predicted protein [Populus trichocarpa] gi|222864804|gb|EEF01935.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  204 bits (520), Expect = 5e-51
 Identities = 98/137 (71%), Positives = 113/137 (82%)
 Frame = +1

Query: 1   PHEALTLFNEMQQKGIMPDQITMLSVISACAHVGALVQAKWIHTYADKNGFGRVLSVNNA 180
           P EAL LF+EMQ  GI PDQ+T+LSVISACA +G L +AKWIH Y DKNG G  L VNNA
Sbjct: 61  PQEALNLFSEMQVFGIKPDQVTILSVISACARLGVLDRAKWIHMYVDKNGLGGALPVNNA 120

Query: 181 LIDMYAKCGNLVNAREVFDNMPRKNVISWSSMINAFAMHGDADSAISLFQRMKEENIEPN 360
           LIDMYAKCGNL  AR VF+ M  +NVISW+SMINAFA+HGDA +A+  F +MK+ENI+PN
Sbjct: 121 LIDMYAKCGNLGAARGVFEKMQSRNVISWTSMINAFAIHGDASNALKFFYQMKDENIKPN 180

Query: 361 GVTFIGVLYACSHAGLV 411
           GVTF+GVLYACSHAGLV
Sbjct: 181 GVTFVGVLYACSHAGLV 197



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/85 (35%), Positives = 52/85 (61%)
 Frame = +1

Query: 157 RVLSVNNALIDMYAKCGNLVNAREVFDNMPRKNVISWSSMINAFAMHGDADSAISLFQRM 336
           R L V  A+I  Y++ G + +AR +FD M  K+++ WS+MI+ +A       A++LF  M
Sbjct: 12  RNLVVLTAMISGYSRVGRVEDARLIFDQMEEKDLVCWSAMISGYAESDKPQEALNLFSEM 71

Query: 337 KEENIEPNGVTFIGVLYACSHAGLV 411
           +   I+P+ VT + V+ AC+  G++
Sbjct: 72  QVFGIKPDQVTILSVISACARLGVL 96


>ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297314084|gb|EFH44507.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 725

 Score =  187 bits (474), Expect = 1e-45
 Identities = 87/137 (63%), Positives = 108/137 (78%)
 Frame = +1

Query: 1   PHEALTLFNEMQQKGIMPDQITMLSVISACAHVGALVQAKWIHTYADKNGFGRVLSVNNA 180
           P EAL +F EM   GI PD +TMLSVISAC ++G L +AKW+H Y   NG   VL ++NA
Sbjct: 328 PQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNA 387

Query: 181 LIDMYAKCGNLVNAREVFDNMPRKNVISWSSMINAFAMHGDADSAISLFQRMKEENIEPN 360
           LI+MYAKCG L  AR+VF+ MP +NV+SWSSMINAFAMHG+A  ++SLF +MK+EN+EPN
Sbjct: 388 LINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPN 447

Query: 361 GVTFIGVLYACSHAGLV 411
            VTF+GVLY CSH+GLV
Sbjct: 448 EVTFVGVLYGCSHSGLV 464



 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 41/135 (30%), Positives = 70/135 (51%)
 Frame = +1

Query: 1   PHEALTLFNEMQQKGIMPDQITMLSVISACAHVGALVQAKWIHTYADKNGFGRVLSVNNA 180
           P   +  +  ++  G   D+I+   ++ A + V AL +   +H +A K        V   
Sbjct: 95  PRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGFAFKIATLSDPFVETG 154

Query: 181 LIDMYAKCGNLVNAREVFDNMPRKNVISWSSMINAFAMHGDADSAISLFQRMKEENIEPN 360
           L+DMYA CG +  AR VFD M +++V++W++MI  +   G  D A  LF+ MK+ N+ P+
Sbjct: 155 LMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPD 214

Query: 361 GVTFIGVLYACSHAG 405
            +    ++ AC   G
Sbjct: 215 EMILCNIVSACGRTG 229



 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 31/164 (18%)
 Frame = +1

Query: 7   EALTLFNEMQQKGIMPDQITMLSVISACAHVGALVQAKWIHTYADKNG------------ 150
           EA  LF EM+   +MPD++ + +++SAC   G +   + I+ +  +N             
Sbjct: 198 EAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALV 257

Query: 151 --------------FGRVLSVNN-----ALIDMYAKCGNLVNAREVFDNMPRKNVISWSS 273
                         F R +SV N     A++  Y+K G L +AR +FD    K+++ W++
Sbjct: 258 TMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTT 317

Query: 274 MINAFAMHGDADSAISLFQRMKEENIEPNGVTFIGVLYACSHAG 405
           MI+A+A       A+ +F+ M    I+P+ VT + V+ AC + G
Sbjct: 318 MISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLG 361



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/103 (27%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
 Frame = +1

Query: 7   EALTLFNEMQQKGIMPDQITMLSVISACAHVGALVQAKWIH-TYADKNGFGRVLSVNNAL 183
           ++L+LF +M+Q+ + P+++T + V+  C+H G + + K I  +  D+      +     +
Sbjct: 431 DSLSLFAQMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCM 490

Query: 184 IDMYAKCGNLVNAREVFDNMPRK-NVISWSSMINAFAMHGDAD 309
           +D++ +   L  A EV ++MP   NV+ W S+++A  +HG+ +
Sbjct: 491 VDLFGRANLLREALEVIESMPMAPNVVIWGSLMSACRVHGELE 533