BLASTX nr result

ID: Glycyrrhiza24_contig00019389 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019389
         (784 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549030.1| PREDICTED: probable RNA-binding protein 18-l...   279   4e-73
ref|XP_003533164.1| PREDICTED: probable RNA-binding protein 18-l...   275   1e-71
ref|XP_003589418.1| Polyadenylate-binding protein [Medicago trun...   268   1e-69
gb|AFK40282.1| unknown [Medicago truncatula]                          267   2e-69
ref|XP_003636251.1| Polyadenylate-binding protein [Medicago trun...   263   3e-68

>ref|XP_003549030.1| PREDICTED: probable RNA-binding protein 18-like [Glycine max]
          Length = 212

 Score =  279 bits (714), Expect = 4e-73
 Identities = 142/160 (88%), Positives = 151/160 (94%), Gaps = 1/160 (0%)
 Frame = +1

Query: 145 VMDPNGSIDDKSENRLYIGNLDLRITEAALLKMFSPFGKIVSEDFLWHTRGPRRGEPRGF 324
           VMDPN   DD+ E+RLYIGNLDLRITEAALLKMFSP+GKI+SEDFLWHTRGP+RGEPRGF
Sbjct: 56  VMDPN---DDRGESRLYIGNLDLRITEAALLKMFSPYGKIISEDFLWHTRGPKRGEPRGF 112

Query: 325 AFIQYSTKEEAELAKEKMHGRLACGRPLVVRLASEKYMLETACSSTKAAGEGHKMHLTGG 504
           AFIQYSTKEEAELAKEKMHGRLACGRPL VRLA EK+MLETA +STKAAGEGHKMHLTGG
Sbjct: 113 AFIQYSTKEEAELAKEKMHGRLACGRPLFVRLAGEKFMLETADNSTKAAGEGHKMHLTGG 172

Query: 505 GG-MGQTSRSAKIAAIKNKLKSLEEENSRSKKQKQSDNIS 621
           GG MGQTSR AKIAAIKNKLKSLEEE+SRSKKQK+SDNIS
Sbjct: 173 GGAMGQTSRHAKIAAIKNKLKSLEEESSRSKKQKRSDNIS 212


>ref|XP_003533164.1| PREDICTED: probable RNA-binding protein 18-like [Glycine max]
          Length = 157

 Score =  275 bits (702), Expect = 1e-71
 Identities = 140/160 (87%), Positives = 149/160 (93%), Gaps = 1/160 (0%)
 Frame = +1

Query: 145 VMDPNGSIDDKSENRLYIGNLDLRITEAALLKMFSPFGKIVSEDFLWHTRGPRRGEPRGF 324
           + DPN   DD+ E+RLYIGNLDLRITEAALLKMFSP+GKI+SEDFLWHTRGP+RGEPRGF
Sbjct: 1   MQDPN---DDRGESRLYIGNLDLRITEAALLKMFSPYGKIISEDFLWHTRGPKRGEPRGF 57

Query: 325 AFIQYSTKEEAELAKEKMHGRLACGRPLVVRLASEKYMLETACSSTKAAGEGHKMHLTGG 504
           AFIQYSTKEEAELAKEKMHGRLAC RPLVVRLA +K MLET  SSTKAAGEGHKMHLTGG
Sbjct: 58  AFIQYSTKEEAELAKEKMHGRLACSRPLVVRLAGDKCMLETVDSSTKAAGEGHKMHLTGG 117

Query: 505 GG-MGQTSRSAKIAAIKNKLKSLEEENSRSKKQKQSDNIS 621
           GG MGQTSRSAKIAAIKNKLKSLEEE+SR+KKQKQSDNIS
Sbjct: 118 GGAMGQTSRSAKIAAIKNKLKSLEEESSRTKKQKQSDNIS 157


>ref|XP_003589418.1| Polyadenylate-binding protein [Medicago truncatula]
           gi|357473041|ref|XP_003606805.1| Polyadenylate-binding
           protein [Medicago truncatula]
           gi|355478466|gb|AES59669.1| Polyadenylate-binding
           protein [Medicago truncatula]
           gi|355507860|gb|AES89002.1| Polyadenylate-binding
           protein [Medicago truncatula]
          Length = 157

 Score =  268 bits (684), Expect = 1e-69
 Identities = 133/158 (84%), Positives = 145/158 (91%)
 Frame = +1

Query: 148 MDPNGSIDDKSENRLYIGNLDLRITEAALLKMFSPFGKIVSEDFLWHTRGPRRGEPRGFA 327
           MD NGS+DDK ENRLY+GNLDLRITEA LLKMFSP+GKI+SEDFLWHTRGP+RGEPRGFA
Sbjct: 1   MDLNGSVDDKCENRLYVGNLDLRITEATLLKMFSPYGKIMSEDFLWHTRGPKRGEPRGFA 60

Query: 328 FIQYSTKEEAELAKEKMHGRLACGRPLVVRLASEKYMLETACSSTKAAGEGHKMHLTGGG 507
           FIQYSTKEEA LAKEKMHGRLAC RPLVVRLA E+Y LE A SSTKA  EGHK+HLT GG
Sbjct: 61  FIQYSTKEEAILAKEKMHGRLACSRPLVVRLAGERYALEKADSSTKAVSEGHKLHLT-GG 119

Query: 508 GMGQTSRSAKIAAIKNKLKSLEEENSRSKKQKQSDNIS 621
           G+GQTSRSAKIAAIKNKLKSLEE+NS++KKQK SDN+S
Sbjct: 120 GIGQTSRSAKIAAIKNKLKSLEEDNSKTKKQKLSDNVS 157


>gb|AFK40282.1| unknown [Medicago truncatula]
          Length = 157

 Score =  267 bits (683), Expect = 2e-69
 Identities = 132/158 (83%), Positives = 145/158 (91%)
 Frame = +1

Query: 148 MDPNGSIDDKSENRLYIGNLDLRITEAALLKMFSPFGKIVSEDFLWHTRGPRRGEPRGFA 327
           MD NGS+DDK ENRLY+GNLDLRITEA LLKMFSP+GKI+SEDFLWHTRGP+RGEPRGFA
Sbjct: 1   MDLNGSVDDKCENRLYVGNLDLRITEATLLKMFSPYGKIMSEDFLWHTRGPKRGEPRGFA 60

Query: 328 FIQYSTKEEAELAKEKMHGRLACGRPLVVRLASEKYMLETACSSTKAAGEGHKMHLTGGG 507
           FIQYSTKEEA LAKEKMHGRLAC RPLV+RLA E+Y LE A SSTKA  EGHK+HLT GG
Sbjct: 61  FIQYSTKEEAILAKEKMHGRLACSRPLVIRLAGERYALEKADSSTKAVSEGHKLHLT-GG 119

Query: 508 GMGQTSRSAKIAAIKNKLKSLEEENSRSKKQKQSDNIS 621
           G+GQTSRSAKIAAIKNKLKSLEE+NS++KKQK SDN+S
Sbjct: 120 GIGQTSRSAKIAAIKNKLKSLEEDNSKTKKQKLSDNVS 157


>ref|XP_003636251.1| Polyadenylate-binding protein [Medicago truncatula]
           gi|355502186|gb|AES83389.1| Polyadenylate-binding
           protein [Medicago truncatula]
          Length = 157

 Score =  263 bits (672), Expect = 3e-68
 Identities = 132/158 (83%), Positives = 143/158 (90%)
 Frame = +1

Query: 148 MDPNGSIDDKSENRLYIGNLDLRITEAALLKMFSPFGKIVSEDFLWHTRGPRRGEPRGFA 327
           MDPNGS+DDK ENRL +GNLDLRITEAALLKMFSP+GKIVS D LWHTRGP+RGEPRGFA
Sbjct: 1   MDPNGSVDDKCENRLCVGNLDLRITEAALLKMFSPYGKIVSVDLLWHTRGPKRGEPRGFA 60

Query: 328 FIQYSTKEEAELAKEKMHGRLACGRPLVVRLASEKYMLETACSSTKAAGEGHKMHLTGGG 507
           FI YSTKEEA LA+EKMHGRLAC RPLVVRLA E+Y LE A SSTKA  EGHK+HLT GG
Sbjct: 61  FIHYSTKEEAILAREKMHGRLACSRPLVVRLAGERYALEKADSSTKAVSEGHKLHLT-GG 119

Query: 508 GMGQTSRSAKIAAIKNKLKSLEEENSRSKKQKQSDNIS 621
           G+GQTSRSAKIAAIKNKLKSLEE+NS++KKQK SDNIS
Sbjct: 120 GIGQTSRSAKIAAIKNKLKSLEEDNSKTKKQKLSDNIS 157


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