BLASTX nr result

ID: Glycyrrhiza24_contig00019387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019387
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527204.1| PREDICTED: anaphase-promoting complex subuni...   315   7e-84
ref|XP_003541161.1| PREDICTED: anaphase-promoting complex subuni...   304   1e-80
gb|ACY00262.1| cell division cycle 16 [Medicago truncatula] gi|2...   296   2e-78
ref|XP_002283201.1| PREDICTED: anaphase-promoting complex subuni...   283   2e-74
ref|XP_004168979.1| PREDICTED: anaphase-promoting complex subuni...   283   3e-74

>ref|XP_003527204.1| PREDICTED: anaphase-promoting complex subunit 6-like [Glycine max]
          Length = 545

 Score =  315 bits (806), Expect = 7e-84
 Identities = 148/164 (90%), Positives = 158/164 (96%)
 Frame = +3

Query: 39  TLEIGMECMRTHSYKLAEQFFMQAKSICASDPLVYNELGVVAYYMKEYKKAVWWFEKTLA 218
           TL IGMECMRTHSYKLAEQFF QAKSIC+SDPLVYNELGVVAY+M+EYKKAVWWFEKTLA
Sbjct: 382 TLYIGMECMRTHSYKLAEQFFTQAKSICSSDPLVYNELGVVAYHMEEYKKAVWWFEKTLA 441

Query: 219 LIPTALSEMWEPTVVNLAHAYRKLKMYREAILYYEKALALSTRSVSTYAGLAYTYHLQDD 398
           L+PT LSE+WE TVVNLAHAYRKLKMYREAI YYEKALALSTRSVSTYAGLAYTYHLQDD
Sbjct: 442 LVPTTLSEIWESTVVNLAHAYRKLKMYREAISYYEKALALSTRSVSTYAGLAYTYHLQDD 501

Query: 399 FTTAITYYHKALWLKPDDQFCTEMLSWALVDESRRGIDPNVEFQ 530
           FTTAI YYHKALWLKPDDQFCTEMLSWAL+DESRRG+DP++EF+
Sbjct: 502 FTTAIAYYHKALWLKPDDQFCTEMLSWALIDESRRGVDPSLEFR 545


>ref|XP_003541161.1| PREDICTED: anaphase-promoting complex subunit 6-like [Glycine max]
          Length = 547

 Score =  304 bits (778), Expect = 1e-80
 Identities = 143/159 (89%), Positives = 151/159 (94%)
 Frame = +3

Query: 39  TLEIGMECMRTHSYKLAEQFFMQAKSICASDPLVYNELGVVAYYMKEYKKAVWWFEKTLA 218
           TL IGMECMRTHSYKLAEQFF QAKSIC SDPLVYNELGVVAY+M+EYKKA WWFEKTLA
Sbjct: 382 TLYIGMECMRTHSYKLAEQFFTQAKSICPSDPLVYNELGVVAYHMEEYKKAAWWFEKTLA 441

Query: 219 LIPTALSEMWEPTVVNLAHAYRKLKMYREAILYYEKALALSTRSVSTYAGLAYTYHLQDD 398
           L+PT LSEMWE TVVNLAHAYRKL MY++AI YYEKALALSTRSVSTYAGLAYTYHLQDD
Sbjct: 442 LVPTTLSEMWESTVVNLAHAYRKLTMYQDAISYYEKALALSTRSVSTYAGLAYTYHLQDD 501

Query: 399 FTTAITYYHKALWLKPDDQFCTEMLSWALVDESRRGIDP 515
           FTTAI+YYHKALWLKPDDQFCTEMLSWAL+DESRRG+DP
Sbjct: 502 FTTAISYYHKALWLKPDDQFCTEMLSWALIDESRRGVDP 540


>gb|ACY00262.1| cell division cycle 16 [Medicago truncatula]
           gi|261840666|gb|ACY00263.1| cell division cycle 16
           [Medicago truncatula]
          Length = 539

 Score =  296 bits (759), Expect = 2e-78
 Identities = 143/161 (88%), Positives = 153/161 (95%)
 Frame = +3

Query: 42  LEIGMECMRTHSYKLAEQFFMQAKSICASDPLVYNELGVVAYYMKEYKKAVWWFEKTLAL 221
           L IGMECMRTHSYKLAEQFFMQAKSIC+SDPLVYNELGVVAYYMKEYKKAVWWFEKTLAL
Sbjct: 379 LYIGMECMRTHSYKLAEQFFMQAKSICSSDPLVYNELGVVAYYMKEYKKAVWWFEKTLAL 438

Query: 222 IPTALSEMWEPTVVNLAHAYRKLKMYREAILYYEKALALSTRSVSTYAGLAYTYHLQDDF 401
           IPTALSE WEPT+VN+AHA RKL+MYREAI YYEKALALST S+STYAGLAYTYHLQDDF
Sbjct: 439 IPTALSETWEPTLVNIAHACRKLEMYREAISYYEKALALST-SLSTYAGLAYTYHLQDDF 497

Query: 402 TTAITYYHKALWLKPDDQFCTEMLSWALVDESRRGIDPNVE 524
           +TAITYYHKALWLKPDDQFCTEMLSWAL+DESR   +P++E
Sbjct: 498 STAITYYHKALWLKPDDQFCTEMLSWALIDESRSSGNPHLE 538


>ref|XP_002283201.1| PREDICTED: anaphase-promoting complex subunit 6 [Vitis vinifera]
           gi|302142883|emb|CBI20178.3| unnamed protein product
           [Vitis vinifera]
          Length = 545

 Score =  283 bits (724), Expect = 2e-74
 Identities = 135/162 (83%), Positives = 148/162 (91%)
 Frame = +3

Query: 39  TLEIGMECMRTHSYKLAEQFFMQAKSICASDPLVYNELGVVAYYMKEYKKAVWWFEKTLA 218
           TL IGME MRTHS+KLAEQFFMQAK+IC SDPLVYNELGVVAY MKEY KAVWWF+KTL+
Sbjct: 382 TLYIGMEYMRTHSFKLAEQFFMQAKTICPSDPLVYNELGVVAYDMKEYNKAVWWFQKTLS 441

Query: 219 LIPTALSEMWEPTVVNLAHAYRKLKMYREAILYYEKALALSTRSVSTYAGLAYTYHLQDD 398
            IP++LSEMWEPT+VNLAHAYRKLKMY EAI +YEKAL LSTRS+STYAGLAYTYHLQD+
Sbjct: 442 HIPSSLSEMWEPTIVNLAHAYRKLKMYHEAISFYEKALTLSTRSLSTYAGLAYTYHLQDN 501

Query: 399 FTTAITYYHKALWLKPDDQFCTEMLSWALVDESRRGIDPNVE 524
           F  AITYYHKALWLKPDDQFCTEML+ ALVDE+RRG+DP  E
Sbjct: 502 FPAAITYYHKALWLKPDDQFCTEMLTLALVDEARRGLDPRNE 543


>ref|XP_004168979.1| PREDICTED: anaphase-promoting complex subunit 6-like [Cucumis
           sativus]
          Length = 241

 Score =  283 bits (723), Expect = 3e-74
 Identities = 137/162 (84%), Positives = 146/162 (90%)
 Frame = +3

Query: 39  TLEIGMECMRTHSYKLAEQFFMQAKSICASDPLVYNELGVVAYYMKEYKKAVWWFEKTLA 218
           TL IGME MRTHS+KLAEQFF+QAK+IC SDPLVYNELGVVAY MKEY KA WWFEKTLA
Sbjct: 78  TLYIGMEYMRTHSFKLAEQFFVQAKTICPSDPLVYNELGVVAYDMKEYNKAAWWFEKTLA 137

Query: 219 LIPTALSEMWEPTVVNLAHAYRKLKMYREAILYYEKALALSTRSVSTYAGLAYTYHLQDD 398
            IP+ LSEMWEPTVVNLAH+YRKLKMYREAI YYEKALALSTRS+STYAGLAYT HLQD 
Sbjct: 138 CIPSPLSEMWEPTVVNLAHSYRKLKMYREAIKYYEKALALSTRSLSTYAGLAYTCHLQDH 197

Query: 399 FTTAITYYHKALWLKPDDQFCTEMLSWALVDESRRGIDPNVE 524
           FT AITYYHKALWLKPDDQFCTEMLS AL+DE + G+DP VE
Sbjct: 198 FTAAITYYHKALWLKPDDQFCTEMLSLALMDECQNGMDPKVE 239


Top