BLASTX nr result

ID: Glycyrrhiza24_contig00019369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019369
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542386.1| PREDICTED: DNA repair protein RAD51 homolog ...   215   3e-54
gb|AFK39468.1| unknown [Medicago truncatula]                          212   2e-53
ref|XP_003609937.1| DNA repair protein RAD51-like protein [Medic...   212   2e-53
ref|XP_003551035.1| PREDICTED: DNA repair protein RAD51 homolog ...   210   1e-52
dbj|BAF02935.1| RAD51 homolog [Populus nigra]                         209   2e-52

>ref|XP_003542386.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Glycine max]
          Length = 344

 Score =  215 bits (547), Expect = 3e-54
 Identities = 113/126 (89%), Positives = 119/126 (94%)
 Frame = -1

Query: 382 SMEQQRPQKTVAQQQQDEGEEVQHGPLPVEQLQASGIASVDVKKLKDAGICTVESVSYTP 203
           +MEQQR QK  A QQQDE EE+Q GPLPVEQLQASGIA+ DVKKLKDAGICTVESV+YTP
Sbjct: 4   TMEQQRHQK--APQQQDEAEEIQPGPLPVEQLQASGIAATDVKKLKDAGICTVESVAYTP 61

Query: 202 RKDLLQIKGISEAKVDKIIEAASKLVPMGFTSASELHAQREAIIQITTGSRELDKILEGG 23
           RKDLLQIKGISEAKVDKIIEAASKLVPMGFTSASELHAQR+AIIQITTGSRELDKILEGG
Sbjct: 62  RKDLLQIKGISEAKVDKIIEAASKLVPMGFTSASELHAQRDAIIQITTGSRELDKILEGG 121

Query: 22  IETGSI 5
           +ETGSI
Sbjct: 122 VETGSI 127


>gb|AFK39468.1| unknown [Medicago truncatula]
          Length = 161

 Score =  212 bits (540), Expect = 2e-53
 Identities = 110/125 (88%), Positives = 118/125 (94%)
 Frame = -1

Query: 379 MEQQRPQKTVAQQQQDEGEEVQHGPLPVEQLQASGIASVDVKKLKDAGICTVESVSYTPR 200
           MEQQR +KT AQQ   E EE+QHGPLPVEQLQASGIA++D+KKLKDAGICTVESV+YTPR
Sbjct: 1   MEQQRLEKT-AQQHDQETEEIQHGPLPVEQLQASGIAALDIKKLKDAGICTVESVAYTPR 59

Query: 199 KDLLQIKGISEAKVDKIIEAASKLVPMGFTSASELHAQREAIIQITTGSRELDKILEGGI 20
           KDLLQIKGIS+AKVDKIIEAA KLVPMGFTSASELHAQRE+IIQITTGSRELDKILEGGI
Sbjct: 60  KDLLQIKGISDAKVDKIIEAAGKLVPMGFTSASELHAQRESIIQITTGSRELDKILEGGI 119

Query: 19  ETGSI 5
           ETGSI
Sbjct: 120 ETGSI 124


>ref|XP_003609937.1| DNA repair protein RAD51-like protein [Medicago truncatula]
           gi|355510992|gb|AES92134.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
          Length = 341

 Score =  212 bits (540), Expect = 2e-53
 Identities = 110/125 (88%), Positives = 118/125 (94%)
 Frame = -1

Query: 379 MEQQRPQKTVAQQQQDEGEEVQHGPLPVEQLQASGIASVDVKKLKDAGICTVESVSYTPR 200
           MEQQR +KT AQQ   E EE+QHGPLPVEQLQASGIA++D+KKLKDAGICTVESV+YTPR
Sbjct: 1   MEQQRLEKT-AQQHDQETEEIQHGPLPVEQLQASGIAALDIKKLKDAGICTVESVAYTPR 59

Query: 199 KDLLQIKGISEAKVDKIIEAASKLVPMGFTSASELHAQREAIIQITTGSRELDKILEGGI 20
           KDLLQIKGIS+AKVDKIIEAA KLVPMGFTSASELHAQRE+IIQITTGSRELDKILEGGI
Sbjct: 60  KDLLQIKGISDAKVDKIIEAAGKLVPMGFTSASELHAQRESIIQITTGSRELDKILEGGI 119

Query: 19  ETGSI 5
           ETGSI
Sbjct: 120 ETGSI 124


>ref|XP_003551035.1| PREDICTED: DNA repair protein RAD51 homolog [Glycine max]
          Length = 343

 Score =  210 bits (534), Expect = 1e-52
 Identities = 109/124 (87%), Positives = 115/124 (92%)
 Frame = -1

Query: 376 EQQRPQKTVAQQQQDEGEEVQHGPLPVEQLQASGIASVDVKKLKDAGICTVESVSYTPRK 197
           +QQRPQ      QQDE EE+QHGPLPVEQLQASGIA+ DVKKLKDAGICTVESV+YTPRK
Sbjct: 9   QQQRPQ------QQDEAEEIQHGPLPVEQLQASGIAATDVKKLKDAGICTVESVAYTPRK 62

Query: 196 DLLQIKGISEAKVDKIIEAASKLVPMGFTSASELHAQREAIIQITTGSRELDKILEGGIE 17
           DLLQIKGISEAKVDKIIEAASKLVPMGFTSASELHAQR+AIIQITTGS ELDKILEGG+E
Sbjct: 63  DLLQIKGISEAKVDKIIEAASKLVPMGFTSASELHAQRDAIIQITTGSTELDKILEGGVE 122

Query: 16  TGSI 5
           TGSI
Sbjct: 123 TGSI 126


>dbj|BAF02935.1| RAD51 homolog [Populus nigra]
          Length = 342

 Score =  209 bits (531), Expect = 2e-52
 Identities = 105/125 (84%), Positives = 118/125 (94%)
 Frame = -1

Query: 379 MEQQRPQKTVAQQQQDEGEEVQHGPLPVEQLQASGIASVDVKKLKDAGICTVESVSYTPR 200
           MEQQR QK V QQQ ++ EEVQHGP PVEQLQASGIAS+DVKKLKDAG+CTVESV+++PR
Sbjct: 1   MEQQRNQKAVNQQQHEDHEEVQHGPFPVEQLQASGIASLDVKKLKDAGLCTVESVAFSPR 60

Query: 199 KDLLQIKGISEAKVDKIIEAASKLVPMGFTSASELHAQREAIIQITTGSRELDKILEGGI 20
           K+LLQIKGISEAKVDKIIEAASKLVP+GFTSAS+LHAQR+ IIQIT+GSRELDKILEGG+
Sbjct: 61  KELLQIKGISEAKVDKIIEAASKLVPLGFTSASQLHAQRQEIIQITSGSRELDKILEGGV 120

Query: 19  ETGSI 5
           ETGSI
Sbjct: 121 ETGSI 125


Top