BLASTX nr result

ID: Glycyrrhiza24_contig00019348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019348
         (990 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43889.1| unknown [Lotus japonicus]                              196   6e-48
sp|Q9M9L0.2|APC11_ARATH RecName: Full=Anaphase-promoting complex...   196   6e-48
ref|XP_003604280.1| Anaphase promoting complex subunit [Medicago...   194   4e-47
ref|NP_187238.2| anaphase-promoting complex subunit 11 [Arabidop...   191   2e-46
ref|XP_002467993.1| hypothetical protein SORBIDRAFT_01g037740 [S...   191   2e-46

>gb|AFK43889.1| unknown [Lotus japonicus]
          Length = 84

 Score =  196 bits (499), Expect = 6e-48
 Identities = 80/84 (95%), Positives = 82/84 (97%)
 Frame = -3

Query: 607 MKVKILQWHAISSWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCI 428
           MKV ILQWHA++SWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCI
Sbjct: 1   MKVNILQWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCI 60

Query: 427 LKWVNSQTSQAHCPMCRREWQFKG 356
           LKWVNSQ SQAHCPMCRREWQFKG
Sbjct: 61  LKWVNSQASQAHCPMCRREWQFKG 84


>sp|Q9M9L0.2|APC11_ARATH RecName: Full=Anaphase-promoting complex subunit 11; AltName:
           Full=Cyclosome subunit 11 gi|16197625|gb|AAL13436.1|
           anaphase promoting complex subunit 11 [Arabidopsis
           thaliana]
          Length = 84

 Score =  196 bits (499), Expect = 6e-48
 Identities = 80/83 (96%), Positives = 83/83 (100%)
 Frame = -3

Query: 607 MKVKILQWHAISSWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCI 428
           MKVKIL+WHA++SWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCI
Sbjct: 1   MKVKILRWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCI 60

Query: 427 LKWVNSQTSQAHCPMCRREWQFK 359
           LKWVNSQTSQAHCPMCRREWQFK
Sbjct: 61  LKWVNSQTSQAHCPMCRREWQFK 83


>ref|XP_003604280.1| Anaphase promoting complex subunit [Medicago truncatula]
           gi|355505335|gb|AES86477.1| Anaphase promoting complex
           subunit [Medicago truncatula]
          Length = 83

 Score =  194 bits (492), Expect = 4e-47
 Identities = 81/84 (96%), Positives = 83/84 (98%)
 Frame = -3

Query: 607 MKVKILQWHAISSWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCI 428
           MKVKIL WHA++SWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCI
Sbjct: 1   MKVKIL-WHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHLHCI 59

Query: 427 LKWVNSQTSQAHCPMCRREWQFKG 356
           LKWVNSQTSQAHCPMCRREWQFKG
Sbjct: 60  LKWVNSQTSQAHCPMCRREWQFKG 83


>ref|NP_187238.2| anaphase-promoting complex subunit 11 [Arabidopsis thaliana]
           gi|334185113|ref|NP_001189819.1| anaphase-promoting
           complex subunit 11 [Arabidopsis thaliana]
           gi|297791461|ref|XP_002863615.1| anaphase promoting
           complex subunit 11 [Arabidopsis lyrata subsp. lyrata]
           gi|297309450|gb|EFH39874.1| anaphase promoting complex
           subunit 11 [Arabidopsis lyrata subsp. lyrata]
           gi|332640788|gb|AEE74309.1| anaphase-promoting complex
           subunit 11 [Arabidopsis thaliana]
           gi|332640789|gb|AEE74310.1| anaphase-promoting complex
           subunit 11 [Arabidopsis thaliana]
          Length = 87

 Score =  191 bits (485), Expect = 2e-46
 Identities = 80/86 (93%), Positives = 83/86 (96%), Gaps = 3/86 (3%)
 Frame = -3

Query: 607 MKVKILQ---WHAISSWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHL 437
           MKVKIL+   WHA++SWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHL
Sbjct: 1   MKVKILRILLWHAVASWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHL 60

Query: 436 HCILKWVNSQTSQAHCPMCRREWQFK 359
           HCILKWVNSQTSQAHCPMCRREWQFK
Sbjct: 61  HCILKWVNSQTSQAHCPMCRREWQFK 86


>ref|XP_002467993.1| hypothetical protein SORBIDRAFT_01g037740 [Sorghum bicolor]
           gi|241921847|gb|EER94991.1| hypothetical protein
           SORBIDRAFT_01g037740 [Sorghum bicolor]
          Length = 89

 Score =  191 bits (485), Expect = 2e-46
 Identities = 78/87 (89%), Positives = 81/87 (93%)
 Frame = -3

Query: 616 GTDMKVKILQWHAISSWTWDAQDETCGICRMAFDGCCPDCKLPGDDCPLIWGACNHAFHL 437
           G  MKVKILQWHA++SWTWDAQDETCGICRMAFDGCCPDCK PGDDCPLIWGACNHA+HL
Sbjct: 3   GNTMKVKILQWHAVASWTWDAQDETCGICRMAFDGCCPDCKFPGDDCPLIWGACNHAYHL 62

Query: 436 HCILKWVNSQTSQAHCPMCRREWQFKG 356
           HCILKWVNSQTS   CPMCRREWQFKG
Sbjct: 63  HCILKWVNSQTSTPLCPMCRREWQFKG 89


Top