BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019347
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat...   218   4e-55
ref|XP_002519191.1| pentatricopeptide repeat-containing protein,...   148   4e-34
ref|XP_002311400.1| predicted protein [Populus trichocarpa] gi|2...   142   3e-32
ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat...   115   5e-24
ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   115   5e-24

>ref|XP_003530549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Glycine max]
          Length = 678

 Score =  218 bits (555), Expect = 4e-55
 Identities = 106/116 (91%), Positives = 112/116 (96%)
 Frame = +3

Query: 3   LRRMQEEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIQALSE 182
           LRRMQ+EGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFI+ALSE
Sbjct: 557 LRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIEALSE 616

Query: 183 SGRLEEAKKMFYSMEANGCSPDSYICNLFIKTLVQQDCVEEAQKVVERCKQKGISL 350
           SGRLEEAKKMFYSMEANGCSPDSYICNL IK LVQQ+ VEEAQ ++ERC+QKGISL
Sbjct: 617 SGRLEEAKKMFYSMEANGCSPDSYICNLIIKILVQQEYVEEAQNIIERCRQKGISL 672



 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 40/119 (33%), Positives = 70/119 (58%)
 Frame = +3

Query: 6   RRMQEEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIQALSES 185
           R MQ  G+ P+  ++N LI   C+   ++KA+KL +S+  +GL PD +T+S+ +  L + 
Sbjct: 453 RDMQVRGVVPNLVTFNTLINGHCKDGAIDKARKLLESLLENGLKPDIFTFSSIVDGLCQI 512

Query: 186 GRLEEAKKMFYSMEANGCSPDSYICNLFIKTLVQQDCVEEAQKVVERCKQKGISLTFFS 362
            R EEA + F  M   G +P++ I N+ I++L     V  + K++ R +++GIS   +S
Sbjct: 513 KRTEEALECFTEMIEWGINPNAVIYNILIRSLCTIGDVARSVKLLRRMQKEGISPDTYS 571



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 31/115 (26%), Positives = 65/115 (56%)
 Frame = +3

Query: 3   LRRMQEEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIQALSE 182
           L  + E G+ PD +++++++   C++ + E+A + F  M   G+NP+   Y+  I++L  
Sbjct: 487 LESLLENGLKPDIFTFSSIVDGLCQIKRTEEALECFTEMIEWGINPNAVIYNILIRSLCT 546

Query: 183 SGRLEEAKKMFYSMEANGCSPDSYICNLFIKTLVQQDCVEEAQKVVERCKQKGIS 347
            G +  + K+   M+  G SPD+Y  N  I+   + + VE+A+K+ +   + G++
Sbjct: 547 IGDVARSVKLLRRMQKEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLN 601



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 31/107 (28%), Positives = 51/107 (47%)
 Frame = +3

Query: 24  GISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIQALSESGRLEEA 203
           G+SP T  YNALI    + N ++ A   F  M+      D +TY+  I  + + G ++EA
Sbjct: 174 GLSPTTRLYNALIDALVKSNSIDLAYLKFQQMAADNCVADRFTYNTLIHGVCKVGVVDEA 233

Query: 204 KKMFYSMEANGCSPDSYICNLFIKTLVQQDCVEEAQKVVERCKQKGI 344
            ++   M+  G  P+ +   + I+       V+EA  V E  K  G+
Sbjct: 234 LRLVRQMKDKGHFPNVFTYTMLIEGFCIASRVDEAFGVFETMKDSGV 280


>ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541506|gb|EEF43055.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 719

 Score =  148 bits (374), Expect = 4e-34
 Identities = 70/118 (59%), Positives = 87/118 (73%)
 Frame = +3

Query: 3   LRRMQEEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIQALSE 182
           LR+MQ +GI+PD +S+NALIQ FCRM KVE AKKLF SM   GL PDNYTY AFI+   +
Sbjct: 590 LRKMQTDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFIKVFCQ 649

Query: 183 SGRLEEAKKMFYSMEANGCSPDSYICNLFIKTLVQQDCVEEAQKVVERCKQKGISLTF 356
           SGR  EAK++F SMEANGC PDS+ CN+ +  LV+QD  E AQK+ + C + GI + F
Sbjct: 650 SGRFNEAKELFLSMEANGCMPDSFTCNIILDALVKQDQFEAAQKIAKTCSEWGILVNF 707



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 36/108 (33%), Positives = 55/108 (50%)
 Frame = +3

Query: 24  GISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIQALSESGRLEEA 203
           GISP T  YNA+I    + N ++ A   F  MS     PD +TY+  I  +  SG ++EA
Sbjct: 212 GISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVDEA 271

Query: 204 KKMFYSMEANGCSPDSYICNLFIKTLVQQDCVEEAQKVVERCKQKGIS 347
            ++   ME  G SP+ +   + I        V+EA +V+E  K + +S
Sbjct: 272 LRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVS 319



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 34/119 (28%), Positives = 63/119 (52%)
 Frame = +3

Query: 6   RRMQEEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIQALSES 185
           + MQ +GI P+  ++N LI  +C+  ++ K++ L   +   G  PD +T+S+ I  L  +
Sbjct: 486 KEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDGLCRA 545

Query: 186 GRLEEAKKMFYSMEANGCSPDSYICNLFIKTLVQQDCVEEAQKVVERCKQKGISLTFFS 362
            ++E+A   F  M   G SP++   N+ I +L     V  + K++ + +  GI+   FS
Sbjct: 546 KQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFS 604


>ref|XP_002311400.1| predicted protein [Populus trichocarpa] gi|222851220|gb|EEE88767.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  142 bits (358), Expect = 3e-32
 Identities = 67/116 (57%), Positives = 88/116 (75%)
 Frame = +3

Query: 3   LRRMQEEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIQALSE 182
           L+ M+++GISPD +S+NALIQ FCRM KVEKA+K+F SMS  GL P+NYTY A ++AL E
Sbjct: 427 LKDMRKDGISPDIFSFNALIQSFCRMGKVEKAEKMFVSMSTLGLIPNNYTYGALVKALFE 486

Query: 183 SGRLEEAKKMFYSMEANGCSPDSYICNLFIKTLVQQDCVEEAQKVVERCKQKGISL 350
            GR +EAKKMF+SME NGC PDS+ CNL  + L +Q   EE Q + + C ++GI+L
Sbjct: 487 LGRCDEAKKMFFSMEVNGCVPDSFTCNLISENLFKQGDFEELQNIAKICSERGIAL 542



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/117 (31%), Positives = 65/117 (55%)
 Frame = +3

Query: 12  MQEEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIQALSESGR 191
           MQ+ G+SP+  ++N LI   C+  +V KA++L   +   GL PD +T+S+ I  L  + +
Sbjct: 325 MQDRGVSPNLVTFNTLISGHCKDGEVHKARELLQMLLELGLKPDIFTFSSIIDCLCRAQQ 384

Query: 192 LEEAKKMFYSMEANGCSPDSYICNLFIKTLVQQDCVEEAQKVVERCKQKGISLTFFS 362
            ++A   F  M   G SP++   N+ I++L     V  + K+++  ++ GIS   FS
Sbjct: 385 FDDALGCFSEMVEWGISPNAVTYNILIRSLCLIGDVGRSMKLLKDMRKDGISPDIFS 441



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/108 (30%), Positives = 52/108 (48%)
 Frame = +3

Query: 24  GISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIQALSESGRLEEA 203
           GI+P T  YNA+I    + N ++ A   F  MS     PD +TY+  I  + + G ++EA
Sbjct: 49  GITPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNMLIHGVCKIGVVDEA 108

Query: 204 KKMFYSMEANGCSPDSYICNLFIKTLVQQDCVEEAQKVVERCKQKGIS 347
            ++   ME  G S + Y     I        V+EA +V E  K + ++
Sbjct: 109 LRLVKQMEGFGYSANVYTYTNLIYGFCNAKRVDEAFRVFETMKLRNVN 156


>ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Cucumis sativus]
          Length = 697

 Score =  115 bits (287), Expect = 5e-24
 Identities = 53/93 (56%), Positives = 73/93 (78%)
 Frame = +3

Query: 3   LRRMQEEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIQALSE 182
           LR+M+  GI PDT+S+NALIQ +   N+ +KA+KLFDSM R G+ PDNYTY A I++L +
Sbjct: 602 LRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCK 661

Query: 183 SGRLEEAKKMFYSMEANGCSPDSYICNLFIKTL 281
           SGR ++A+++F SM+ NGC+PDSY C+LF  TL
Sbjct: 662 SGRHDKAREIFLSMKENGCTPDSYTCSLFSDTL 694



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/110 (30%), Positives = 59/110 (53%)
 Frame = +3

Query: 12  MQEEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIQALSESGR 191
           M E  + P+  +YN LI  FC +  V ++  L   M   G+ PD ++++A IQ  +   R
Sbjct: 570 MVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNR 629

Query: 192 LEEAKKMFYSMEANGCSPDSYICNLFIKTLVQQDCVEEAQKVVERCKQKG 341
            ++A+K+F SM   G  PD+Y     IK+L +    ++A+++    K+ G
Sbjct: 630 FQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENG 679



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/119 (28%), Positives = 57/119 (47%)
 Frame = +3

Query: 6   RRMQEEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIQALSES 185
           R +   GISP+  +YN LI  FCR   ++KA++L + +  S   PD +T+++ I  L ++
Sbjct: 498 RDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQA 557

Query: 186 GRLEEAKKMFYSMEANGCSPDSYICNLFIKTLVQQDCVEEAQKVVERCKQKGISLTFFS 362
            + E A   F  M      P+    N+ I +      V  +  ++ + K  GI    FS
Sbjct: 558 HKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFS 616



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 29/107 (27%), Positives = 51/107 (47%)
 Frame = +3

Query: 24  GISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIQALSESGRLEEA 203
           G++P T  YNA++    + N ++ A   F  MS     PD +TY+  I  +   G ++EA
Sbjct: 224 GLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDEA 283

Query: 204 KKMFYSMEANGCSPDSYICNLFIKTLVQQDCVEEAQKVVERCKQKGI 344
            ++   ME  G  P+ +   + I          EA KV++  K++ +
Sbjct: 284 LRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGEAFKVLQTMKERNV 330



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/54 (44%), Positives = 35/54 (64%)
 Frame = +3

Query: 24  GISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIQALSES 185
           GI PD Y+Y ALI+  C+  + +KA+++F SM  +G  PD+YT S F   L+ S
Sbjct: 644 GIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYTCSLFSDTLAHS 697


>ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g16890, mitochondrial-like
           [Cucumis sativus]
          Length = 688

 Score =  115 bits (287), Expect = 5e-24
 Identities = 53/93 (56%), Positives = 73/93 (78%)
 Frame = +3

Query: 3   LRRMQEEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIQALSE 182
           LR+M+  GI PDT+S+NALIQ +   N+ +KA+KLFDSM R G+ PDNYTY A I++L +
Sbjct: 593 LRQMKLHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCK 652

Query: 183 SGRLEEAKKMFYSMEANGCSPDSYICNLFIKTL 281
           SGR ++A+++F SM+ NGC+PDSY C+LF  TL
Sbjct: 653 SGRHDKAREIFLSMKENGCTPDSYTCSLFSDTL 685



 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/110 (30%), Positives = 59/110 (53%)
 Frame = +3

Query: 12  MQEEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIQALSESGR 191
           M E  + P+  +YN LI  FC +  V ++  L   M   G+ PD ++++A IQ  +   R
Sbjct: 561 MVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFSFNALIQGYTGKNR 620

Query: 192 LEEAKKMFYSMEANGCSPDSYICNLFIKTLVQQDCVEEAQKVVERCKQKG 341
            ++A+K+F SM   G  PD+Y     IK+L +    ++A+++    K+ G
Sbjct: 621 FQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENG 670



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/119 (28%), Positives = 57/119 (47%)
 Frame = +3

Query: 6   RRMQEEGISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIQALSES 185
           R +   GISP+  +YN LI  FCR   ++KA++L + +  S   PD +T+++ I  L ++
Sbjct: 489 RDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDGLCQA 548

Query: 186 GRLEEAKKMFYSMEANGCSPDSYICNLFIKTLVQQDCVEEAQKVVERCKQKGISLTFFS 362
            + E A   F  M      P+    N+ I +      V  +  ++ + K  GI    FS
Sbjct: 549 HKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMKLHGIQPDTFS 607



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 24/54 (44%), Positives = 35/54 (64%)
 Frame = +3

Query: 24  GISPDTYSYNALIQIFCRMNKVEKAKKLFDSMSRSGLNPDNYTYSAFIQALSES 185
           GI PD Y+Y ALI+  C+  + +KA+++F SM  +G  PD+YT S F   L+ S
Sbjct: 635 GIQPDNYTYGALIKSLCKSGRHDKAREIFLSMKENGCTPDSYTCSLFSDTLAHS 688