BLASTX nr result

ID: Glycyrrhiza24_contig00019339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019339
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609575.1| Helicase swr1 [Medicago truncatula] gi|35551...   132   4e-29
ref|XP_003609574.1| Helicase swr1 [Medicago truncatula] gi|35551...   132   4e-29
ref|XP_004134469.1| PREDICTED: uncharacterized protein LOC101206...   108   6e-22
emb|CBI26124.3| unnamed protein product [Vitis vinifera]              103   1e-20
emb|CAN84155.1| hypothetical protein VITISV_029853 [Vitis vinifera]   103   1e-20

>ref|XP_003609575.1| Helicase swr1 [Medicago truncatula] gi|355510630|gb|AES91772.1|
           Helicase swr1 [Medicago truncatula]
          Length = 3310

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/78 (82%), Positives = 67/78 (85%)
 Frame = +1

Query: 1   SAMPFKEQQLKQLRAQCLVFLAFRNGLAPKKLHLEIALGTTFSREDGCRKDLIDPKGKSQ 180
           S MPFKE QLKQLRAQCLVFLAFRNGL PKKLHLE+A GT F+REDG  KD  DPKGKSQ
Sbjct: 408 STMPFKENQLKQLRAQCLVFLAFRNGLPPKKLHLEVAFGTFFAREDGSNKDSNDPKGKSQ 467

Query: 181 SFNEPGNTSGVIMPFGSS 234
           SF+EPGN  GVIMPFGSS
Sbjct: 468 SFSEPGNMPGVIMPFGSS 485


>ref|XP_003609574.1| Helicase swr1 [Medicago truncatula] gi|355510629|gb|AES91771.1|
           Helicase swr1 [Medicago truncatula]
          Length = 3312

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/78 (82%), Positives = 67/78 (85%)
 Frame = +1

Query: 1   SAMPFKEQQLKQLRAQCLVFLAFRNGLAPKKLHLEIALGTTFSREDGCRKDLIDPKGKSQ 180
           S MPFKE QLKQLRAQCLVFLAFRNGL PKKLHLE+A GT F+REDG  KD  DPKGKSQ
Sbjct: 408 STMPFKENQLKQLRAQCLVFLAFRNGLPPKKLHLEVAFGTFFAREDGSNKDSNDPKGKSQ 467

Query: 181 SFNEPGNTSGVIMPFGSS 234
           SF+EPGN  GVIMPFGSS
Sbjct: 468 SFSEPGNMPGVIMPFGSS 485


>ref|XP_004134469.1| PREDICTED: uncharacterized protein LOC101206586, partial [Cucumis
           sativus]
          Length = 2086

 Score =  108 bits (269), Expect = 6e-22
 Identities = 54/76 (71%), Positives = 63/76 (82%)
 Frame = +1

Query: 1   SAMPFKEQQLKQLRAQCLVFLAFRNGLAPKKLHLEIALGTTFSREDGCRKDLIDPKGKSQ 180
           S +PFKEQQLKQLRAQCLVFLAFRNGL PKKLHLEIALG  F +E+G RKD +DP+G SQ
Sbjct: 331 SRLPFKEQQLKQLRAQCLVFLAFRNGLMPKKLHLEIALGNNFPKEEGLRKD-VDPRGISQ 389

Query: 181 SFNEPGNTSGVIMPFG 228
           SFNE  +++  +MP G
Sbjct: 390 SFNEARSSNEGMMPSG 405


>emb|CBI26124.3| unnamed protein product [Vitis vinifera]
          Length = 2266

 Score =  103 bits (257), Expect = 1e-20
 Identities = 54/80 (67%), Positives = 58/80 (72%), Gaps = 4/80 (5%)
 Frame = +1

Query: 1   SAMPFKEQQLKQLRAQCLVFLAFRNGLAPKKLHLEIALGTTFSRE----DGCRKDLIDPK 168
           S MPFKEQ LKQLRAQCLVFLA RN L PKKLHLEIALG  + +E    DG RK+LID K
Sbjct: 403 SGMPFKEQHLKQLRAQCLVFLAIRNNLMPKKLHLEIALGNIYPKEGGITDGPRKELIDHK 462

Query: 169 GKSQSFNEPGNTSGVIMPFG 228
           GK  S NEP N   V +PFG
Sbjct: 463 GKDYSLNEPSNVPEVPVPFG 482


>emb|CAN84155.1| hypothetical protein VITISV_029853 [Vitis vinifera]
          Length = 771

 Score =  103 bits (257), Expect = 1e-20
 Identities = 54/80 (67%), Positives = 58/80 (72%), Gaps = 4/80 (5%)
 Frame = +1

Query: 1   SAMPFKEQQLKQLRAQCLVFLAFRNGLAPKKLHLEIALGTTFSRE----DGCRKDLIDPK 168
           S MPFKEQ LKQLRAQCLVFLA RN L PKKLHLEIALG  + +E    DG RK+LID K
Sbjct: 437 SGMPFKEQHLKQLRAQCLVFLAIRNNLMPKKLHLEIALGNIYPKEGGITDGPRKELIDHK 496

Query: 169 GKSQSFNEPGNTSGVIMPFG 228
           GK  S NEP N   V +PFG
Sbjct: 497 GKDYSLNEPSNVPEVPVPFG 516


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