BLASTX nr result

ID: Glycyrrhiza24_contig00019337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019337
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616631.1| FACT complex subunit SSRP1 [Medicago truncat...   104   7e-21
ref|XP_003517023.1| PREDICTED: FACT complex subunit SSRP1-like [...   103   1e-20
ref|XP_003521979.1| PREDICTED: FACT complex subunit SSRP1-like [...   103   2e-20
sp|O04235.1|SSRP1_VICFA RecName: Full=FACT complex subunit SSRP1...   103   2e-20
ref|XP_002517473.1| structure-specific recognition protein, puta...    99   5e-19

>ref|XP_003616631.1| FACT complex subunit SSRP1 [Medicago truncatula]
           gi|355517966|gb|AES99589.1| FACT complex subunit SSRP1
           [Medicago truncatula]
          Length = 648

 Score =  104 bits (260), Expect = 7e-21
 Identities = 48/51 (94%), Positives = 50/51 (98%)
 Frame = -3

Query: 153 MTDGHLFNNITLGGRGGTNPGQIKIYSGGILWKRQGGGKSIEVDKADIMGV 1
           MTDGHLFNNITLGGRGGTNPGQIKIYSGGILWKRQGGGKSIEVDK+DI+ V
Sbjct: 1   MTDGHLFNNITLGGRGGTNPGQIKIYSGGILWKRQGGGKSIEVDKSDIVSV 51


>ref|XP_003517023.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
          Length = 640

 Score =  103 bits (257), Expect = 1e-20
 Identities = 47/51 (92%), Positives = 49/51 (96%)
 Frame = -3

Query: 153 MTDGHLFNNITLGGRGGTNPGQIKIYSGGILWKRQGGGKSIEVDKADIMGV 1
           MTDGHLFNNITLGGRGGTNPGQIKIY GGI+WKRQGGGK IEVDK+DIMGV
Sbjct: 1   MTDGHLFNNITLGGRGGTNPGQIKIYPGGIIWKRQGGGKLIEVDKSDIMGV 51


>ref|XP_003521979.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
          Length = 614

 Score =  103 bits (256), Expect = 2e-20
 Identities = 47/51 (92%), Positives = 49/51 (96%)
 Frame = -3

Query: 153 MTDGHLFNNITLGGRGGTNPGQIKIYSGGILWKRQGGGKSIEVDKADIMGV 1
           MTDGHLFNNITLGGRGGTNPGQIKIY GGI+WKRQGGGK IEVDK+DIMGV
Sbjct: 1   MTDGHLFNNITLGGRGGTNPGQIKIYPGGIVWKRQGGGKLIEVDKSDIMGV 51


>sp|O04235.1|SSRP1_VICFA RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
           chromatin transcription complex subunit SSRP1; AltName:
           Full=Recombination signal sequence recognition protein 1
           gi|2104679|emb|CAA66480.1| transcription factor [Vicia
           faba var. minor]
          Length = 642

 Score =  103 bits (256), Expect = 2e-20
 Identities = 47/51 (92%), Positives = 49/51 (96%)
 Frame = -3

Query: 153 MTDGHLFNNITLGGRGGTNPGQIKIYSGGILWKRQGGGKSIEVDKADIMGV 1
           MTDGHLFNNITLG RGGTNPGQIKIYSGGILWKRQGGGK+I+VDK DIMGV
Sbjct: 1   MTDGHLFNNITLGXRGGTNPGQIKIYSGGILWKRQGGGKTIDVDKTDIMGV 51


>ref|XP_002517473.1| structure-specific recognition protein, putative [Ricinus communis]
           gi|223543484|gb|EEF45015.1| structure-specific
           recognition protein, putative [Ricinus communis]
          Length = 640

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 42/51 (82%), Positives = 50/51 (98%)
 Frame = -3

Query: 153 MTDGHLFNNITLGGRGGTNPGQIKIYSGGILWKRQGGGKSIEVDKADIMGV 1
           MTDGHLFNNI+LGGRGGTNPGQ+K++SGGILWK+QGGGK++EVDKADI G+
Sbjct: 1   MTDGHLFNNISLGGRGGTNPGQLKLHSGGILWKKQGGGKAVEVDKADIAGL 51


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