BLASTX nr result

ID: Glycyrrhiza24_contig00019334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019334
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553759.1| PREDICTED: uncharacterized protein LOC100783...    95   7e-18
ref|XP_003520839.1| PREDICTED: uncharacterized protein LOC100797...    92   6e-17
ref|XP_003591404.1| Mediator of RNA polymerase II transcription ...    80   1e-13
ref|XP_002319641.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|XP_002531290.1| protein with unknown function [Ricinus commu...    72   5e-11

>ref|XP_003553759.1| PREDICTED: uncharacterized protein LOC100783484 [Glycine max]
          Length = 1718

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 48/51 (94%), Positives = 50/51 (98%)
 Frame = +1

Query: 244 MAAELGQQTVELSTLVTRAAHDSYNSLKELVDKCRSSELSDTDKKISILKF 396
           MA+ELGQQTVELSTLVTRAAHDSY SLKELVDKC+SSELSDTDKKISILKF
Sbjct: 1   MASELGQQTVELSTLVTRAAHDSYASLKELVDKCKSSELSDTDKKISILKF 51


>ref|XP_003520839.1| PREDICTED: uncharacterized protein LOC100797588 [Glycine max]
          Length = 1813

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 47/51 (92%), Positives = 49/51 (96%)
 Frame = +1

Query: 244 MAAELGQQTVELSTLVTRAAHDSYNSLKELVDKCRSSELSDTDKKISILKF 396
           M AELGQQTVELSTLVTRAA+DSY SLKELVDKC+SSELSDTDKKISILKF
Sbjct: 1   MTAELGQQTVELSTLVTRAANDSYASLKELVDKCKSSELSDTDKKISILKF 51


>ref|XP_003591404.1| Mediator of RNA polymerase II transcription subunit [Medicago
           truncatula] gi|355480452|gb|AES61655.1| Mediator of RNA
           polymerase II transcription subunit [Medicago
           truncatula]
          Length = 1765

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 43/50 (86%), Positives = 46/50 (92%), Gaps = 1/50 (2%)
 Frame = +1

Query: 250 AELGQQTVELSTLVTRAAHDSYNSLKELVDKCR-SSELSDTDKKISILKF 396
           AELGQQTVELSTLVTRAA DSYNSLK+LV KC  S+ELSDTDKKIS+LKF
Sbjct: 4   AELGQQTVELSTLVTRAAQDSYNSLKDLVHKCSCSTELSDTDKKISMLKF 53


>ref|XP_002319641.1| predicted protein [Populus trichocarpa] gi|222858017|gb|EEE95564.1|
           predicted protein [Populus trichocarpa]
          Length = 1740

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/49 (73%), Positives = 44/49 (89%)
 Frame = +1

Query: 250 AELGQQTVELSTLVTRAAHDSYNSLKELVDKCRSSELSDTDKKISILKF 396
           AELGQQTVE STLV+RAA DS+ SLKELVDK +S++ SD+DKKIS+LK+
Sbjct: 2   AELGQQTVEFSTLVSRAAEDSFLSLKELVDKSKSTQQSDSDKKISLLKY 50


>ref|XP_002531290.1| protein with unknown function [Ricinus communis]
           gi|223529123|gb|EEF31103.1| protein with unknown
           function [Ricinus communis]
          Length = 1746

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 36/49 (73%), Positives = 44/49 (89%)
 Frame = +1

Query: 250 AELGQQTVELSTLVTRAAHDSYNSLKELVDKCRSSELSDTDKKISILKF 396
           AELGQQTVE STLV+RAA +SY SLKELVDK +S+E SD++KKI++LKF
Sbjct: 2   AELGQQTVEFSTLVSRAAEESYLSLKELVDKSKSAEQSDSEKKINLLKF 50


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