BLASTX nr result
ID: Glycyrrhiza24_contig00019334
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00019334 (397 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003553759.1| PREDICTED: uncharacterized protein LOC100783... 95 7e-18 ref|XP_003520839.1| PREDICTED: uncharacterized protein LOC100797... 92 6e-17 ref|XP_003591404.1| Mediator of RNA polymerase II transcription ... 80 1e-13 ref|XP_002319641.1| predicted protein [Populus trichocarpa] gi|2... 72 4e-11 ref|XP_002531290.1| protein with unknown function [Ricinus commu... 72 5e-11 >ref|XP_003553759.1| PREDICTED: uncharacterized protein LOC100783484 [Glycine max] Length = 1718 Score = 94.7 bits (234), Expect = 7e-18 Identities = 48/51 (94%), Positives = 50/51 (98%) Frame = +1 Query: 244 MAAELGQQTVELSTLVTRAAHDSYNSLKELVDKCRSSELSDTDKKISILKF 396 MA+ELGQQTVELSTLVTRAAHDSY SLKELVDKC+SSELSDTDKKISILKF Sbjct: 1 MASELGQQTVELSTLVTRAAHDSYASLKELVDKCKSSELSDTDKKISILKF 51 >ref|XP_003520839.1| PREDICTED: uncharacterized protein LOC100797588 [Glycine max] Length = 1813 Score = 91.7 bits (226), Expect = 6e-17 Identities = 47/51 (92%), Positives = 49/51 (96%) Frame = +1 Query: 244 MAAELGQQTVELSTLVTRAAHDSYNSLKELVDKCRSSELSDTDKKISILKF 396 M AELGQQTVELSTLVTRAA+DSY SLKELVDKC+SSELSDTDKKISILKF Sbjct: 1 MTAELGQQTVELSTLVTRAANDSYASLKELVDKCKSSELSDTDKKISILKF 51 >ref|XP_003591404.1| Mediator of RNA polymerase II transcription subunit [Medicago truncatula] gi|355480452|gb|AES61655.1| Mediator of RNA polymerase II transcription subunit [Medicago truncatula] Length = 1765 Score = 80.5 bits (197), Expect = 1e-13 Identities = 43/50 (86%), Positives = 46/50 (92%), Gaps = 1/50 (2%) Frame = +1 Query: 250 AELGQQTVELSTLVTRAAHDSYNSLKELVDKCR-SSELSDTDKKISILKF 396 AELGQQTVELSTLVTRAA DSYNSLK+LV KC S+ELSDTDKKIS+LKF Sbjct: 4 AELGQQTVELSTLVTRAAQDSYNSLKDLVHKCSCSTELSDTDKKISMLKF 53 >ref|XP_002319641.1| predicted protein [Populus trichocarpa] gi|222858017|gb|EEE95564.1| predicted protein [Populus trichocarpa] Length = 1740 Score = 72.4 bits (176), Expect = 4e-11 Identities = 36/49 (73%), Positives = 44/49 (89%) Frame = +1 Query: 250 AELGQQTVELSTLVTRAAHDSYNSLKELVDKCRSSELSDTDKKISILKF 396 AELGQQTVE STLV+RAA DS+ SLKELVDK +S++ SD+DKKIS+LK+ Sbjct: 2 AELGQQTVEFSTLVSRAAEDSFLSLKELVDKSKSTQQSDSDKKISLLKY 50 >ref|XP_002531290.1| protein with unknown function [Ricinus communis] gi|223529123|gb|EEF31103.1| protein with unknown function [Ricinus communis] Length = 1746 Score = 72.0 bits (175), Expect = 5e-11 Identities = 36/49 (73%), Positives = 44/49 (89%) Frame = +1 Query: 250 AELGQQTVELSTLVTRAAHDSYNSLKELVDKCRSSELSDTDKKISILKF 396 AELGQQTVE STLV+RAA +SY SLKELVDK +S+E SD++KKI++LKF Sbjct: 2 AELGQQTVEFSTLVSRAAEESYLSLKELVDKSKSAEQSDSEKKINLLKF 50