BLASTX nr result

ID: Glycyrrhiza24_contig00019316 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019316
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521418.1| PREDICTED: ras-related protein RABC2a-like [...    68   7e-10
ref|NP_001236498.1| uncharacterized protein LOC100527726 [Glycin...    68   7e-10
ref|NP_568121.1| RAB GTPase-C2A [Arabidopsis thaliana] gi|297810...    67   1e-09
ref|XP_002519452.1| protein with unknown function [Ricinus commu...    67   1e-09
ref|XP_002322909.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09

>ref|XP_003521418.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
          Length = 211

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/36 (97%), Positives = 35/36 (97%)
 Frame = -1

Query: 109 YDLSFKILLIGDSGVGKSSLLVSFISCSVEDLSPTI 2
           YDLSFKILLIGDSGVGKSSLLVSFIS SVEDLSPTI
Sbjct: 11  YDLSFKILLIGDSGVGKSSLLVSFISSSVEDLSPTI 46


>ref|NP_001236498.1| uncharacterized protein LOC100527726 [Glycine max]
           gi|255633056|gb|ACU16883.1| unknown [Glycine max]
          Length = 194

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/36 (97%), Positives = 35/36 (97%)
 Frame = -1

Query: 109 YDLSFKILLIGDSGVGKSSLLVSFISCSVEDLSPTI 2
           YDLSFKILLIGDSGVGKSSLLVSFIS SVEDLSPTI
Sbjct: 11  YDLSFKILLIGDSGVGKSSLLVSFISSSVEDLSPTI 46


>ref|NP_568121.1| RAB GTPase-C2A [Arabidopsis thaliana]
           gi|297810433|ref|XP_002873100.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|75098916|sp|O49841.1|RAC2A_ARATH RecName:
           Full=Ras-related protein RABC2a; Short=AtRABC2a;
           AltName: Full=Ras-related protein Rab18B; Short=AtRab18B
           gi|2723477|dbj|BAA24074.1| GTP-binding protein
           [Arabidopsis thaliana] gi|7378638|emb|CAB83314.1| AtRab
           GTP-binding protein [Arabidopsis thaliana]
           gi|26453054|dbj|BAC43603.1| putative AtRab GTP-binding
           protein [Arabidopsis thaliana]
           gi|29824251|gb|AAP04086.1| unknown protein [Arabidopsis
           thaliana] gi|297318937|gb|EFH49359.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|332003236|gb|AED90619.1| RAB GTPase-C2A [Arabidopsis
           thaliana]
          Length = 210

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 34/36 (94%), Positives = 35/36 (97%)
 Frame = -1

Query: 109 YDLSFKILLIGDSGVGKSSLLVSFISCSVEDLSPTI 2
           YDLSFKILLIGDSGVGKSSLLVSFIS SVEDL+PTI
Sbjct: 10  YDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTI 45


>ref|XP_002519452.1| protein with unknown function [Ricinus communis]
           gi|223541315|gb|EEF42866.1| protein with unknown
           function [Ricinus communis]
          Length = 216

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 34/36 (94%), Positives = 35/36 (97%)
 Frame = -1

Query: 109 YDLSFKILLIGDSGVGKSSLLVSFISCSVEDLSPTI 2
           YDLSFKILLIGDSGVGKSSLLVSFIS SVEDL+PTI
Sbjct: 13  YDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTI 48


>ref|XP_002322909.1| predicted protein [Populus trichocarpa] gi|222867539|gb|EEF04670.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 34/36 (94%), Positives = 35/36 (97%)
 Frame = -1

Query: 109 YDLSFKILLIGDSGVGKSSLLVSFISCSVEDLSPTI 2
           YDLSFKILLIGDSGVGKSSLLVSFIS SVEDL+PTI
Sbjct: 8   YDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTI 43


Top