BLASTX nr result

ID: Glycyrrhiza24_contig00019231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019231
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535712.1| PREDICTED: zinc finger CCCH domain-containin...   254   4e-66
ref|XP_003555260.1| PREDICTED: zinc finger CCCH domain-containin...   253   9e-66
ref|XP_003638436.1| Zinc finger CCCH domain-containing protein [...   231   4e-59
ref|XP_002282967.2| PREDICTED: zinc finger CCCH domain-containin...   209   2e-52
emb|CBI26957.3| unnamed protein product [Vitis vinifera]              209   2e-52

>ref|XP_003535712.1| PREDICTED: zinc finger CCCH domain-containing protein 15-like
           [Glycine max]
          Length = 360

 Score =  254 bits (650), Expect = 4e-66
 Identities = 117/127 (92%), Positives = 123/127 (96%), Gaps = 1/127 (0%)
 Frame = +1

Query: 40  RTKGATRSRASSTPPDAVQKVYVRGGQKEEEPLEMVVYNQGMFKTELCNKWQETGTCPYG 219
           R KGATR RAS+TPP+ VQKVYVRGGQKEEEPLEM+VYNQGMFKTELCNKWQETGTCPYG
Sbjct: 234 RNKGATRPRASATPPEPVQKVYVRGGQKEEEPLEMIVYNQGMFKTELCNKWQETGTCPYG 293

Query: 220 DHCQFAHGIGELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTEQEKA-ISQPKP 396
           DHCQFAHGIGELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTEQEKA +SQPKP
Sbjct: 294 DHCQFAHGIGELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTEQEKAVVSQPKP 353

Query: 397 RTMKLDR 417
           R+MKL+R
Sbjct: 354 RSMKLER 360


>ref|XP_003555260.1| PREDICTED: zinc finger CCCH domain-containing protein 15-like
           [Glycine max]
          Length = 321

 Score =  253 bits (647), Expect = 9e-66
 Identities = 116/127 (91%), Positives = 123/127 (96%), Gaps = 1/127 (0%)
 Frame = +1

Query: 40  RTKGATRSRASSTPPDAVQKVYVRGGQKEEEPLEMVVYNQGMFKTELCNKWQETGTCPYG 219
           R KGATR RAS+TPP+ VQKVYVRGG+KEEEPLEM+VYNQGMFKTELCNKWQETGTCPYG
Sbjct: 195 RNKGATRPRASATPPEPVQKVYVRGGEKEEEPLEMIVYNQGMFKTELCNKWQETGTCPYG 254

Query: 220 DHCQFAHGIGELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTEQEKA-ISQPKP 396
           DHCQFAHGIGELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTEQEKA +SQPKP
Sbjct: 255 DHCQFAHGIGELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTEQEKAVVSQPKP 314

Query: 397 RTMKLDR 417
           R+MKL+R
Sbjct: 315 RSMKLER 321


>ref|XP_003638436.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|355504371|gb|AES85574.1| Zinc finger CCCH
           domain-containing protein [Medicago truncatula]
          Length = 139

 Score =  231 bits (590), Expect = 4e-59
 Identities = 104/108 (96%), Positives = 108/108 (100%)
 Frame = +1

Query: 94  QKVYVRGGQKEEEPLEMVVYNQGMFKTELCNKWQETGTCPYGDHCQFAHGIGELRPVIRH 273
           QKV+VRGGQKEEEPLEMVVYNQGMFKTELCNKWQETGTCPYGDHCQFAHGIGELRPVIRH
Sbjct: 32  QKVFVRGGQKEEEPLEMVVYNQGMFKTELCNKWQETGTCPYGDHCQFAHGIGELRPVIRH 91

Query: 274 PRYKTEVCRMVLAGVVCPYGHRCHFRHALTEQEKAISQPKPRTMKLDR 417
           PRYKTEVCRMVLAGVVCPYGHRCHFRHALTEQEKA+SQPKPR+MKL+R
Sbjct: 92  PRYKTEVCRMVLAGVVCPYGHRCHFRHALTEQEKAMSQPKPRSMKLER 139


>ref|XP_002282967.2| PREDICTED: zinc finger CCCH domain-containing protein 15 [Vitis
           vinifera]
          Length = 396

 Score =  209 bits (531), Expect = 2e-52
 Identities = 97/126 (76%), Positives = 108/126 (85%)
 Frame = +1

Query: 40  RTKGATRSRASSTPPDAVQKVYVRGGQKEEEPLEMVVYNQGMFKTELCNKWQETGTCPYG 219
           RT+   R R +S P +  QKVYVRG +KEEEP+E+ VYNQGMFKTELCNKWQE+GTCPYG
Sbjct: 272 RTRIPNRLRTTS-PLNGTQKVYVRGVKKEEEPVELEVYNQGMFKTELCNKWQESGTCPYG 330

Query: 220 DHCQFAHGIGELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTEQEKAISQPKPR 399
           DHCQFAHGI ELRPVIRHPRYKTEVCRMVLAG  CPYGHRCHFRHALTEQE+ + Q +PR
Sbjct: 331 DHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGDACPYGHRCHFRHALTEQERFMGQLQPR 390

Query: 400 TMKLDR 417
            +KLDR
Sbjct: 391 AIKLDR 396


>emb|CBI26957.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score =  209 bits (531), Expect = 2e-52
 Identities = 97/126 (76%), Positives = 108/126 (85%)
 Frame = +1

Query: 40  RTKGATRSRASSTPPDAVQKVYVRGGQKEEEPLEMVVYNQGMFKTELCNKWQETGTCPYG 219
           RT+   R R +S P +  QKVYVRG +KEEEP+E+ VYNQGMFKTELCNKWQE+GTCPYG
Sbjct: 274 RTRIPNRLRTTS-PLNGTQKVYVRGVKKEEEPVELEVYNQGMFKTELCNKWQESGTCPYG 332

Query: 220 DHCQFAHGIGELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTEQEKAISQPKPR 399
           DHCQFAHGI ELRPVIRHPRYKTEVCRMVLAG  CPYGHRCHFRHALTEQE+ + Q +PR
Sbjct: 333 DHCQFAHGIEELRPVIRHPRYKTEVCRMVLAGDACPYGHRCHFRHALTEQERFMGQLQPR 392

Query: 400 TMKLDR 417
            +KLDR
Sbjct: 393 AIKLDR 398


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