BLASTX nr result

ID: Glycyrrhiza24_contig00019193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019193
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601640.1| TBC1 domain family member [Medicago truncatu...   141   5e-32
ref|XP_003552768.1| PREDICTED: TBC1 domain family member 13-like...   112   3e-23
ref|XP_003629671.1| TBC1 domain family member [Medicago truncatu...   112   4e-23
ref|XP_004138936.1| PREDICTED: TBC1 domain family member 13-like...   111   5e-23
ref|XP_002271213.1| PREDICTED: TBC1 domain family member 13 [Vit...   107   8e-22

>ref|XP_003601640.1| TBC1 domain family member [Medicago truncatula]
           gi|355490688|gb|AES71891.1| TBC1 domain family member
           [Medicago truncatula]
          Length = 432

 Score =  141 bits (356), Expect = 5e-32
 Identities = 78/147 (53%), Positives = 92/147 (62%)
 Frame = -2

Query: 442 KRVPDWLNSPLWSSPSDHHRFSAVXXXXXXXXXXXXXXPIREDPPPTIIQHSRTNHNGIG 263
           KRVPDWLNSP+WSSP++ +RFSA                    PP T+++   + HN I 
Sbjct: 4   KRVPDWLNSPMWSSPTEQNRFSATSYPSEPP----------SPPPVTVVEDPPSIHNAI- 52

Query: 262 IXXXXXXXXXXXXXXXXXXXXXSRQGQDQALLLAELSRKVIDMRELRRIASQGIPDASGL 83
                                 SR  Q Q+ LLAELSRKVIDMRELR+IASQGIPD+ GL
Sbjct: 53  TTSPPSSSSSSASTSSTDDMSISRLAQSQSQLLAELSRKVIDMRELRKIASQGIPDSPGL 112

Query: 82  RSTVWKLLLGYLPPDRALWSTELAKKR 2
           RST+WKLLLGYLPPDR+LWS+ELAKKR
Sbjct: 113 RSTIWKLLLGYLPPDRSLWSSELAKKR 139


>ref|XP_003552768.1| PREDICTED: TBC1 domain family member 13-like [Glycine max]
          Length = 424

 Score =  112 bits (280), Expect = 3e-23
 Identities = 71/148 (47%), Positives = 81/148 (54%), Gaps = 1/148 (0%)
 Frame = -2

Query: 442 KRVPDWLNSPLWSSPSDHHRFSAVXXXXXXXXXXXXXXPIREDPPPTIIQHSRTNHNGIG 263
           K+VP+W+NS LWS+PSD                      +RE+PP        TN N   
Sbjct: 5   KQVPEWMNSSLWSTPSD----------------PPASVSVREEPPTI-----PTNQNA-- 41

Query: 262 IXXXXXXXXXXXXXXXXXXXXXSRQGQDQALLLAELSRKVIDMRELRRI-ASQGIPDASG 86
                                 SR  Q Q  LLAELSRKVIDMRELRR+ ASQGI DA  
Sbjct: 42  --SPPLSSSSSVSSPTATADDISRHAQAQVQLLAELSRKVIDMRELRRVVASQGISDAGA 99

Query: 85  LRSTVWKLLLGYLPPDRALWSTELAKKR 2
           LR T+WKLLLGYLPPDR+LWS+ELAKKR
Sbjct: 100 LRPTLWKLLLGYLPPDRSLWSSELAKKR 127


>ref|XP_003629671.1| TBC1 domain family member [Medicago truncatula]
           gi|355523693|gb|AET04147.1| TBC1 domain family member
           [Medicago truncatula]
          Length = 472

 Score =  112 bits (279), Expect = 4e-23
 Identities = 67/165 (40%), Positives = 88/165 (53%), Gaps = 18/165 (10%)
 Frame = -2

Query: 442 KRVPDWLNSPLWSSPS-----------------DHHRFSAVXXXXXXXXXXXXXXPIRED 314
           K+VPDWLNS LWS+P+                      S V               +++ 
Sbjct: 4   KKVPDWLNSSLWSAPTVPPSPATTTTTATTTTTTTEESSPVHSPISPPQPPSPPIVVQDP 63

Query: 313 PPPTIIQHSRTN-HNGIGIXXXXXXXXXXXXXXXXXXXXXSRQGQDQALLLAELSRKVID 137
           PP  II+ SR++ H+   +                            A LLAELS+KV+D
Sbjct: 64  PPKQIIEDSRSDDHHDHDVPPSAYDV------------------SHHAQLLAELSKKVMD 105

Query: 136 MRELRRIASQGIPDASGLRSTVWKLLLGYLPPDRALWSTELAKKR 2
           +RELRRI+ QG+PD++G+RST+WKLLLGYLPPDRALWS+ELAKKR
Sbjct: 106 LRELRRISCQGVPDSAGIRSTLWKLLLGYLPPDRALWSSELAKKR 150


>ref|XP_004138936.1| PREDICTED: TBC1 domain family member 13-like [Cucumis sativus]
           gi|449505611|ref|XP_004162521.1| PREDICTED: TBC1 domain
           family member 13-like [Cucumis sativus]
          Length = 446

 Score =  111 bits (278), Expect = 5e-23
 Identities = 68/152 (44%), Positives = 81/152 (53%), Gaps = 5/152 (3%)
 Frame = -2

Query: 442 KRVPDWLNSPLWSS-PSDH----HRFSAVXXXXXXXXXXXXXXPIREDPPPTIIQHSRTN 278
           KRVPDWLNS LWSS PS      HR+++               P+   PP       RT 
Sbjct: 4   KRVPDWLNSSLWSSAPSVDDDRLHRYTSEPAATTSSPEPVVQPPVPVPPPSATTAVVRTE 63

Query: 277 HNGIGIXXXXXXXXXXXXXXXXXXXXXSRQGQDQALLLAELSRKVIDMRELRRIASQGIP 98
                                      +     QA LL ELS+K+I++RELR+IASQGIP
Sbjct: 64  SPKSDTRDSRGNNNVTNDDNGTSSGPSAEDVSRQAQLLVELSKKIINLRELRKIASQGIP 123

Query: 97  DASGLRSTVWKLLLGYLPPDRALWSTELAKKR 2
           D  G+RSTVWKLLLGYLPPDR LW++ELAKKR
Sbjct: 124 DGPGIRSTVWKLLLGYLPPDRGLWTSELAKKR 155


>ref|XP_002271213.1| PREDICTED: TBC1 domain family member 13 [Vitis vinifera]
           gi|298205157|emb|CBI17216.3| unnamed protein product
           [Vitis vinifera]
          Length = 437

 Score =  107 bits (268), Expect = 8e-22
 Identities = 66/150 (44%), Positives = 79/150 (52%), Gaps = 3/150 (2%)
 Frame = -2

Query: 442 KRVPDWLNSPLWS---SPSDHHRFSAVXXXXXXXXXXXXXXPIREDPPPTIIQHSRTNHN 272
           KRVPDWLNS LWS   S ++  R                  P   +PPP ++Q       
Sbjct: 4   KRVPDWLNSSLWSASPSATEDDRLQRYDSKPSTPTPPSPVAPPVPEPPPAVVQEEPPKPE 63

Query: 271 GIGIXXXXXXXXXXXXXXXXXXXXXSRQGQDQALLLAELSRKVIDMRELRRIASQGIPDA 92
                                    +     QA LLAELS+KVI++RELRR+ASQGIPD 
Sbjct: 64  ---------PKESVNNVHDASSDDSAEDISRQAQLLAELSKKVINVRELRRLASQGIPDG 114

Query: 91  SGLRSTVWKLLLGYLPPDRALWSTELAKKR 2
           +G+RSTVWKLLLGYLP DR  WS+ELAKKR
Sbjct: 115 AGIRSTVWKLLLGYLPTDRGHWSSELAKKR 144


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