BLASTX nr result

ID: Glycyrrhiza24_contig00019177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019177
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526646.1| PREDICTED: replication factor C subunit 4-li...   175   4e-42
ref|XP_003523427.1| PREDICTED: replication factor C subunit 4-li...   174   9e-42
gb|AFK40832.1| unknown [Lotus japonicus]                              171   4e-41
ref|XP_003602047.1| Replication factor C subunit [Medicago trunc...   171   4e-41
ref|XP_004168930.1| PREDICTED: replication factor C subunit 4-li...   171   8e-41

>ref|XP_003526646.1| PREDICTED: replication factor C subunit 4-like isoform 1 [Glycine
           max]
          Length = 342

 Score =  175 bits (443), Expect = 4e-42
 Identities = 84/84 (100%), Positives = 84/84 (100%)
 Frame = +1

Query: 91  MAPILQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 270
           MAPILQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPILQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 271 AIAHQLFGPELYKSRVLELNASDD 342
           AIAHQLFGPELYKSRVLELNASDD
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDD 84


>ref|XP_003523427.1| PREDICTED: replication factor C subunit 4-like isoform 1 [Glycine
           max]
          Length = 342

 Score =  174 bits (440), Expect = 9e-42
 Identities = 83/84 (98%), Positives = 84/84 (100%)
 Frame = +1

Query: 91  MAPILQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 270
           MAPILQS+QPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPILQSTQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 271 AIAHQLFGPELYKSRVLELNASDD 342
           AIAHQLFGPELYKSRVLELNASDD
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDD 84


>gb|AFK40832.1| unknown [Lotus japonicus]
          Length = 342

 Score =  171 bits (434), Expect = 4e-41
 Identities = 82/84 (97%), Positives = 84/84 (100%)
 Frame = +1

Query: 91  MAPILQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 270
           MAPI+QSSQPWVEKYRPKQVKDVA+QDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPIVQSSQPWVEKYRPKQVKDVAYQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 271 AIAHQLFGPELYKSRVLELNASDD 342
           AIAHQLFGPELYKSRVLELNASDD
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDD 84


>ref|XP_003602047.1| Replication factor C subunit [Medicago truncatula]
           gi|357520353|ref|XP_003630465.1| Replication factor C
           subunit [Medicago truncatula]
           gi|217073528|gb|ACJ85124.1| unknown [Medicago
           truncatula] gi|355491095|gb|AES72298.1| Replication
           factor C subunit [Medicago truncatula]
           gi|355524487|gb|AET04941.1| Replication factor C subunit
           [Medicago truncatula] gi|388492316|gb|AFK34224.1|
           unknown [Medicago truncatula]
          Length = 339

 Score =  171 bits (434), Expect = 4e-41
 Identities = 81/84 (96%), Positives = 84/84 (100%)
 Frame = +1

Query: 91  MAPILQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 270
           MAPI+QS+QPWVEKYRPKQVKDVAHQ+EVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPIIQSTQPWVEKYRPKQVKDVAHQEEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 60

Query: 271 AIAHQLFGPELYKSRVLELNASDD 342
           AIAHQLFGPELYKSRVLELNASDD
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDD 84


>ref|XP_004168930.1| PREDICTED: replication factor C subunit 4-like [Cucumis sativus]
          Length = 219

 Score =  171 bits (432), Expect = 8e-41
 Identities = 81/84 (96%), Positives = 83/84 (98%)
 Frame = +1

Query: 91  MAPILQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTAL 270
           MAP+LQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLET +CPHMLFYGPPGTGKTTTAL
Sbjct: 1   MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL 60

Query: 271 AIAHQLFGPELYKSRVLELNASDD 342
           AIAHQLFGPELYKSRVLELNASDD
Sbjct: 61  AIAHQLFGPELYKSRVLELNASDD 84


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