BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019097
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590454.1| RNA polymerase sigma factor [Medicago trunca...   107   1e-21
ref|XP_003542550.1| PREDICTED: RNA polymerase sigma factor rpoD ...   104   6e-21
gb|ACU14403.1| unknown [Glycine max]                                  104   6e-21
ref|XP_003536999.1| PREDICTED: RNA polymerase sigma factor rpoD-...    98   6e-19
ref|XP_002326192.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07

>ref|XP_003590454.1| RNA polymerase sigma factor [Medicago truncatula]
           gi|355479502|gb|AES60705.1| RNA polymerase sigma factor
           [Medicago truncatula]
          Length = 567

 Score =  107 bits (267), Expect = 1e-21
 Identities = 49/60 (81%), Positives = 53/60 (88%)
 Frame = +2

Query: 29  MESTRSMFCSSPPFPPRTHHWNTLPSSPYTSVLMLREQAAPTVASWSTSFSAQNFPTSVL 208
           MES R+MFCSSP  PPRTHHWNTLPSS YTSVLMLREQ APTV +W TS+S+QNFPTSVL
Sbjct: 1   MESARTMFCSSPLCPPRTHHWNTLPSSSYTSVLMLREQVAPTVTAWCTSYSSQNFPTSVL 60


>ref|XP_003542550.1| PREDICTED: RNA polymerase sigma factor rpoD [Glycine max]
          Length = 574

 Score =  104 bits (260), Expect = 6e-21
 Identities = 50/61 (81%), Positives = 55/61 (90%), Gaps = 1/61 (1%)
 Frame = +2

Query: 29  MESTRSMFCSSPPFPPRTHH-WNTLPSSPYTSVLMLREQAAPTVASWSTSFSAQNFPTSV 205
           ME +R+MFCSSPPFPPRTHH WNTLP S  TSVLMLREQA+PTVASWS++FSAQNFP SV
Sbjct: 1   MEFSRTMFCSSPPFPPRTHHPWNTLPLSSSTSVLMLREQASPTVASWSSNFSAQNFPASV 60

Query: 206 L 208
           L
Sbjct: 61  L 61


>gb|ACU14403.1| unknown [Glycine max]
          Length = 196

 Score =  104 bits (260), Expect = 6e-21
 Identities = 50/61 (81%), Positives = 55/61 (90%), Gaps = 1/61 (1%)
 Frame = +2

Query: 29  MESTRSMFCSSPPFPPRTHH-WNTLPSSPYTSVLMLREQAAPTVASWSTSFSAQNFPTSV 205
           ME +R+MFCSSPPFPPRTHH WNTLP S  TSVLMLREQA+PTVASWS++FSAQNFP SV
Sbjct: 1   MEFSRTMFCSSPPFPPRTHHPWNTLPLSSSTSVLMLREQASPTVASWSSNFSAQNFPASV 60

Query: 206 L 208
           L
Sbjct: 61  L 61


>ref|XP_003536999.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Glycine max]
          Length = 571

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 49/62 (79%), Positives = 54/62 (87%), Gaps = 2/62 (3%)
 Frame = +2

Query: 29  MESTRSMFCSSPPFPPRTHH-WNTLPSSPYTS-VLMLREQAAPTVASWSTSFSAQNFPTS 202
           ME  R+MFCSSPPFPPRTHH W+TLPSS  TS VLML EQA+PTVASWS++FSAQNFP S
Sbjct: 1   MEFARTMFCSSPPFPPRTHHPWSTLPSSSSTSSVLMLHEQASPTVASWSSNFSAQNFPAS 60

Query: 203 VL 208
           VL
Sbjct: 61  VL 62


>ref|XP_002326192.1| predicted protein [Populus trichocarpa] gi|222833385|gb|EEE71862.1|
           predicted protein [Populus trichocarpa]
          Length = 535

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/60 (56%), Positives = 43/60 (71%)
 Frame = +2

Query: 29  MESTRSMFCSSPPFPPRTHHWNTLPSSPYTSVLMLREQAAPTVASWSTSFSAQNFPTSVL 208
           ME+ R++  SSP FP RTH  N+L SS    VL+LREQA P V+S  T+ +AQ+FPTSVL
Sbjct: 1   MEAGRTLLSSSPSFPTRTHLKNSLTSS----VLILREQATPAVSSIPTTSTAQHFPTSVL 56