BLASTX nr result

ID: Glycyrrhiza24_contig00019059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019059
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540667.1| PREDICTED: pentatricopeptide repeat-containi...    63   3e-08
ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containi...    60   1e-07

>ref|XP_003540667.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
           chloroplastic-like [Glycine max]
          Length = 711

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/36 (77%), Positives = 30/36 (83%)
 Frame = -2

Query: 145 HDPHDPIYKFFKTRTLVSSQSPGKEGKLSLLRNHRV 38
           HDP DPIYKFFKTRT  SSQ PGKEGKLSL +N R+
Sbjct: 92  HDPDDPIYKFFKTRTRFSSQDPGKEGKLSLQKNRRI 127


>ref|XP_003539003.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50280,
           chloroplastic-like [Glycine max]
          Length = 703

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = -2

Query: 145 HDPHDPIYKFFKTRTLVSSQSPGKEGKLSLLRNHRV 38
           +DP DPIYKFFKTRT  SSQ PGKEGKLSL +N R+
Sbjct: 84  YDPDDPIYKFFKTRTRFSSQDPGKEGKLSLQKNRRI 119


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