BLASTX nr result

ID: Glycyrrhiza24_contig00019043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019043
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556580.1| PREDICTED: ATP-dependent DNA helicase 2 subu...   257   8e-67
ref|XP_002317447.1| predicted protein [Populus trichocarpa] gi|2...   254   7e-66
dbj|BAF03493.1| Ku70 homolog [Populus nigra]                          251   6e-65
ref|XP_002521532.1| ku P70 DNA helicase, putative [Ricinus commu...   248   4e-64
ref|XP_002267875.1| PREDICTED: ATP-dependent DNA helicase 2 subu...   244   7e-63

>ref|XP_003556580.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU70-like [Glycine
           max]
          Length = 633

 Score =  257 bits (656), Expect = 8e-67
 Identities = 130/153 (84%), Positives = 138/153 (90%), Gaps = 2/153 (1%)
 Frame = -3

Query: 454 ENESSKEYVVYLVDASPKMFNTTCHAE--DQRDETHFHIALSCISHSLKSQIINRSYDQV 281
           ENESSKEYVVYLVDASPKMF+TTC AE  DQ  ETHFHIA+SCIS +L+SQIINRSYDQV
Sbjct: 27  ENESSKEYVVYLVDASPKMFSTTCPAEEDDQNGETHFHIAISCISQTLESQIINRSYDQV 86

Query: 280 AICFFNTRERKNLQDLNGVYVFNVAEREFLDRPTARLIKEFDHLEESFSKNIGSQHGVMS 101
           AICFFNTRE+ NLQDLN V+VFNV EREFLDRPTARLIKEF  LEESFSK IGSQHG++S
Sbjct: 87  AICFFNTREKNNLQDLNSVFVFNVPEREFLDRPTARLIKEFYQLEESFSKIIGSQHGIVS 146

Query: 100 GNRENPLYNAIWVAQALLRKGSAKTVDKRILLF 2
           G REN LYNAIW AQALLRKGSAKTVDKRILLF
Sbjct: 147 GTRENSLYNAIWAAQALLRKGSAKTVDKRILLF 179


>ref|XP_002317447.1| predicted protein [Populus trichocarpa] gi|222860512|gb|EEE98059.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score =  254 bits (648), Expect = 7e-66
 Identities = 119/151 (78%), Positives = 143/151 (94%)
 Frame = -3

Query: 454 ENESSKEYVVYLVDASPKMFNTTCHAEDQRDETHFHIALSCISHSLKSQIINRSYDQVAI 275
           + ESSKE+VVYLVDASPKMF++TC +ED ++ETHFHIA+SCI+ SLK+QIINRSYD+VAI
Sbjct: 23  QRESSKEFVVYLVDASPKMFSSTCPSEDGKEETHFHIAISCIAQSLKTQIINRSYDEVAI 82

Query: 274 CFFNTRERKNLQDLNGVYVFNVAEREFLDRPTARLIKEFDHLEESFSKNIGSQHGVMSGN 95
           CFFNTRE+KNLQDLNG +VFNVAERE+LDRPTARLIK+FD +EESF+K+IGSQ+G++SG+
Sbjct: 83  CFFNTREKKNLQDLNGAFVFNVAEREYLDRPTARLIKDFDCIEESFTKDIGSQYGIVSGS 142

Query: 94  RENPLYNAIWVAQALLRKGSAKTVDKRILLF 2
           REN LYNA+W+AQALLRKGSAKT DKRILLF
Sbjct: 143 RENSLYNALWIAQALLRKGSAKTADKRILLF 173


>dbj|BAF03493.1| Ku70 homolog [Populus nigra]
          Length = 627

 Score =  251 bits (640), Expect = 6e-65
 Identities = 118/151 (78%), Positives = 142/151 (94%)
 Frame = -3

Query: 454 ENESSKEYVVYLVDASPKMFNTTCHAEDQRDETHFHIALSCISHSLKSQIINRSYDQVAI 275
           + ESSKE+VVYLVDASPKMF++TC +ED ++ETHF IA+SCI+ SLK+QIINRSYD+VAI
Sbjct: 23  QRESSKEFVVYLVDASPKMFSSTCPSEDGKEETHFQIAISCIAQSLKTQIINRSYDEVAI 82

Query: 274 CFFNTRERKNLQDLNGVYVFNVAEREFLDRPTARLIKEFDHLEESFSKNIGSQHGVMSGN 95
           CFFNTRE+KNLQDLNG +VFNVAERE+LDRPTARLIK+FD +EESF+K+IGSQ+G++SG+
Sbjct: 83  CFFNTREKKNLQDLNGAFVFNVAEREYLDRPTARLIKDFDCIEESFTKDIGSQYGIVSGS 142

Query: 94  RENPLYNAIWVAQALLRKGSAKTVDKRILLF 2
           REN LYNA+W+AQALLRKGSAKT DKRILLF
Sbjct: 143 RENSLYNALWIAQALLRKGSAKTADKRILLF 173


>ref|XP_002521532.1| ku P70 DNA helicase, putative [Ricinus communis]
           gi|223539210|gb|EEF40803.1| ku P70 DNA helicase,
           putative [Ricinus communis]
          Length = 626

 Score =  248 bits (633), Expect = 4e-64
 Identities = 120/150 (80%), Positives = 139/150 (92%)
 Frame = -3

Query: 454 ENESSKEYVVYLVDASPKMFNTTCHAEDQRDETHFHIALSCISHSLKSQIINRSYDQVAI 275
           + ESSKE+VVYLVDASPKMF TT  AEDQ+DETHFHIA+S I+ SLK+QIINRSYD+VAI
Sbjct: 23  QRESSKEFVVYLVDASPKMFTTTFPAEDQKDETHFHIAVSSIAQSLKTQIINRSYDEVAI 82

Query: 274 CFFNTRERKNLQDLNGVYVFNVAEREFLDRPTARLIKEFDHLEESFSKNIGSQHGVMSGN 95
           CFFNTRE++NLQDLNGV+V+NVAERE+LDRPTARLIK+FD +EESF K IGSQ+G++SG+
Sbjct: 83  CFFNTREKRNLQDLNGVFVYNVAEREYLDRPTARLIKDFDCIEESFMKEIGSQYGIVSGS 142

Query: 94  RENPLYNAIWVAQALLRKGSAKTVDKRILL 5
           REN LYNA+WVAQALLRKGSAKT DKRILL
Sbjct: 143 RENSLYNALWVAQALLRKGSAKTADKRILL 172


>ref|XP_002267875.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU70 [Vitis
           vinifera] gi|296089629|emb|CBI39448.3| unnamed protein
           product [Vitis vinifera]
          Length = 623

 Score =  244 bits (622), Expect = 7e-63
 Identities = 119/151 (78%), Positives = 134/151 (88%)
 Frame = -3

Query: 454 ENESSKEYVVYLVDASPKMFNTTCHAEDQRDETHFHIALSCISHSLKSQIINRSYDQVAI 275
           E  S+KE+VVYLVDASPKMF+TT   EDQ+DET FH A+SCIS SLK+QIIN S D+VAI
Sbjct: 21  EKASTKEFVVYLVDASPKMFSTTFQGEDQKDETPFHAAVSCISQSLKTQIINNSNDEVAI 80

Query: 274 CFFNTRERKNLQDLNGVYVFNVAEREFLDRPTARLIKEFDHLEESFSKNIGSQHGVMSGN 95
           CFFNTRE+KNLQDLNGV+VFNVAERE+LDRPTARLIKEFD +EE F K IGSQ+G+MSG+
Sbjct: 81  CFFNTREKKNLQDLNGVFVFNVAEREYLDRPTARLIKEFDRIEELFMKEIGSQYGIMSGS 140

Query: 94  RENPLYNAIWVAQALLRKGSAKTVDKRILLF 2
           REN LYNA+W AQALLRKGSAKT DKRILLF
Sbjct: 141 RENSLYNALWAAQALLRKGSAKTADKRILLF 171


Top