BLASTX nr result

ID: Glycyrrhiza24_contig00019024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00019024
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528124.1| PREDICTED: lysine-specific demethylase REF6-...   130   9e-29
ref|XP_003528125.1| PREDICTED: lysine-specific demethylase REF6-...   129   2e-28
ref|XP_003638525.1| Lysine-specific demethylase 5B [Medicago tru...   116   2e-24
ref|XP_003522416.1| PREDICTED: lysine-specific demethylase REF6-...    99   4e-19
ref|XP_002875903.1| hypothetical protein ARALYDRAFT_906087 [Arab...    68   7e-10

>ref|XP_003528124.1| PREDICTED: lysine-specific demethylase REF6-like [Glycine max]
          Length = 1586

 Score =  130 bits (328), Expect = 9e-29
 Identities = 69/98 (70%), Positives = 77/98 (78%)
 Frame = +3

Query: 3   DVLQNNDLLHALCKESAIVLLPRSSSDFSVCSKLRVGSQQLKVNPEFSLNECNSEGMNSS 182
           DVLQNNDLLH L K S +VLLPRSS D SVCSKLRVGSQQ       S+N  NSEGM+SS
Sbjct: 405 DVLQNNDLLHILGKGSDVVLLPRSSVDISVCSKLRVGSQQ-------SINVRNSEGMHSS 457

Query: 183 KNFISDDLVFNRNHGIKKVKGFYSVKEKFATLCERNRV 296
           K F+SDDLVFNR+ GIK+ K FY VK+KF TLCERNR+
Sbjct: 458 KGFVSDDLVFNRSPGIKQEKSFYFVKDKFTTLCERNRI 495


>ref|XP_003528125.1| PREDICTED: lysine-specific demethylase REF6-like [Glycine max]
          Length = 1565

 Score =  129 bits (324), Expect = 2e-28
 Identities = 67/98 (68%), Positives = 76/98 (77%)
 Frame = +3

Query: 3   DVLQNNDLLHALCKESAIVLLPRSSSDFSVCSKLRVGSQQLKVNPEFSLNECNSEGMNSS 182
           DVLQNNDLLH L + SA+VLLP SS D SVCSKLRVGSQQ       S+N  NSEGM+SS
Sbjct: 406 DVLQNNDLLHFLGQGSAVVLLPHSSVDISVCSKLRVGSQQ-------SINLSNSEGMHSS 458

Query: 183 KNFISDDLVFNRNHGIKKVKGFYSVKEKFATLCERNRV 296
           K F+SDDL FNR+HGIK+ K FY VK+KF TLCERN +
Sbjct: 459 KGFVSDDLAFNRSHGIKQGKSFYFVKDKFTTLCERNMI 496


>ref|XP_003638525.1| Lysine-specific demethylase 5B [Medicago truncatula]
           gi|355504460|gb|AES85663.1| Lysine-specific demethylase
           5B [Medicago truncatula]
          Length = 1621

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/94 (61%), Positives = 70/94 (74%)
 Frame = +3

Query: 3   DVLQNNDLLHALCKESAIVLLPRSSSDFSVCSKLRVGSQQLKVNPEFSLNECNSEGMNSS 182
           DVLQNNDLLH L  ES++VLLPR+S D S CSKLRVG +  KVNP FS + CNSEG++SS
Sbjct: 436 DVLQNNDLLHVLGNESSVVLLPRNSVDISSCSKLRVGCRPPKVNPGFSFDVCNSEGLSSS 495

Query: 183 KNFISDDLVFNRNHGIKKVKGFYSVKEKFATLCE 284
           K F+SDDLVF+RN GI + K   SV ++   L E
Sbjct: 496 KGFVSDDLVFDRNRGIAQEKNLCSVNDELTLLSE 529


>ref|XP_003522416.1| PREDICTED: lysine-specific demethylase REF6-like [Glycine max]
          Length = 1552

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 54/98 (55%), Positives = 63/98 (64%)
 Frame = +3

Query: 3   DVLQNNDLLHALCKESAIVLLPRSSSDFSVCSKLRVGSQQLKVNPEFSLNECNSEGMNSS 182
           DVLQNNDLLH L + SA+VLLPRSS D SVCSKLR                         
Sbjct: 408 DVLQNNDLLHFLGQGSAVVLLPRSSVDISVCSKLR------------------------- 442

Query: 183 KNFISDDLVFNRNHGIKKVKGFYSVKEKFATLCERNRV 296
             F+SDDL FNR+HGIK+ K FYSVK+KF+TLCER+R+
Sbjct: 443 --FVSDDLAFNRSHGIKQGKSFYSVKDKFSTLCERDRI 478


>ref|XP_002875903.1| hypothetical protein ARALYDRAFT_906087 [Arabidopsis lyrata subsp.
           lyrata] gi|297321741|gb|EFH52162.1| hypothetical protein
           ARALYDRAFT_906087 [Arabidopsis lyrata subsp. lyrata]
          Length = 1378

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 42/97 (43%), Positives = 58/97 (59%)
 Frame = +3

Query: 3   DVLQNNDLLHALCKESAIVLLPRSSSDFSVCSKLRVGSQQLKVNPEFSLNECNSEGMNSS 182
           +++ NN+LL +L K S + LLP+SSSD SVCS LR+GS  L  N E  +          S
Sbjct: 426 NIIHNNELLSSLGKGSPVALLPQSSSDISVCSDLRIGS-NLITNQENPI-------QLKS 477

Query: 183 KNFISDDLVFNRNHGIKKVKGFYSVKEKFATLCERNR 293
           ++  S  ++   N+G+K      SVKEKF +LCERNR
Sbjct: 478 EDLSSHSVMVGLNNGLKNT---VSVKEKFTSLCERNR 511


Top